RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 RALBP1Q15311 655 aa16.22■□□□□ 0.19
ABCD3-201ENST00000315713 SIPA1L3O60292 1781 aaPredicted RBP16.22■□□□□ 0.19
ABCD3-201ENST00000315713 SCN7AQ01118 1682 aa16.21■□□□□ 0.19
ABCD3-201ENST00000315713 HMOX1P09601 288 aa16.21■□□□□ 0.19
ABCD3-201ENST00000315713 KCNA3P22001 575 aa16.21■□□□□ 0.19
ABCD3-201ENST00000315713 FKBP8Q14318 412 aa16.21■□□□□ 0.19
ABCD3-201ENST00000315713 COL11A2P13942 1736 aaPredicted RBP16.2■□□□□ 0.18
ABCD3-201ENST00000315713 DICER1Q9UPY3 1922 aaKnown RBP16.2■□□□□ 0.18
ABCD3-201ENST00000315713 NFATC2IPQ8NCF5 419 aa16.2■□□□□ 0.18
ABCD3-201ENST00000315713 NUDCQ9Y266 331 aa16.2■□□□□ 0.18
ABCD3-201ENST00000315713 PCNTO95613 3336 aa16.2■□□□□ 0.18
ABCD3-201ENST00000315713 APLP1P51693 650 aa16.19■□□□□ 0.18
ABCD3-201ENST00000315713 C9orf131Q5VYM1 1079 aa16.19■□□□□ 0.18
ABCD3-201ENST00000315713 TOMM70O94826 608 aa16.18■□□□□ 0.18
ABCD3-201ENST00000315713 CHRNA5P30532 468 aa16.17■□□□□ 0.18
ABCD3-201ENST00000315713 INTS5Q6P9B9 1019 aaKnown RBP16.17■□□□□ 0.18
ABCD3-201ENST00000315713 PIM2Q9P1W9 311 aa16.17■□□□□ 0.18
ABCD3-201ENST00000315713 POLRMTO00411 1230 aaKnown RBP16.16■□□□□ 0.18
ABCD3-201ENST00000315713 DALRD3Q5D0E6 543 aaKnown RBP16.16■□□□□ 0.18
ABCD3-201ENST00000315713 DNAJC10Q8IXB1 793 aa16.16■□□□□ 0.18
ABCD3-201ENST00000315713 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
ABCD3-201ENST00000315713 FER1L6Q2WGJ9 1857 aa16.16■□□□□ 0.18
ABCD3-201ENST00000315713 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
ABCD3-201ENST00000315713 MYBBP1AQ9BQG0 1328 aaKnown RBP16.16■□□□□ 0.18
ABCD3-201ENST00000315713 BCORQ6W2J9 1755 aa16.15■□□□□ 0.18
ABCD3-201ENST00000315713 COL15A1P39059 1388 aa16.15■□□□□ 0.18
ABCD3-201ENST00000315713 U2AF1L5P0DN76 240 aaPredicted RBP16.15■□□□□ 0.18
ABCD3-201ENST00000315713 U2AF1Q01081 240 aaKnown RBP eCLIP16.15■□□□□ 0.183e-6■□□□□ 10.4
ABCD3-201ENST00000315713 RNF181Q9P0P0 153 aa16.15■□□□□ 0.18
ABCD3-201ENST00000315713 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
ABCD3-201ENST00000315713 AKAP4Q5JQC9 854 aa16.14■□□□□ 0.17
ABCD3-201ENST00000315713 USPL1Q5W0Q7 1092 aa16.14■□□□□ 0.17
ABCD3-201ENST00000315713 RBM46Q8TBY0 533 aaKnown RBP16.14■□□□□ 0.17
ABCD3-201ENST00000315713 SLC52A2Q9HAB3 445 aa16.14■□□□□ 0.17
ABCD3-201ENST00000315713 SLC39A6Q13433 755 aa16.13■□□□□ 0.17
ABCD3-201ENST00000315713 DNAJC5GQ8N7S2 189 aa16.13■□□□□ 0.17
ABCD3-201ENST00000315713 PRKRIP1Q9H875 184 aaPredicted RBP16.13■□□□□ 0.17
ABCD3-201ENST00000315713 LGR6Q9HBX8 967 aa16.13■□□□□ 0.17
ABCD3-201ENST00000315713 ZPR1O75312 459 aa16.12■□□□□ 0.17
ABCD3-201ENST00000315713 TM4SF1P30408 202 aa16.12■□□□□ 0.17
ABCD3-201ENST00000315713 HTRA3P83110 453 aa16.12■□□□□ 0.17
ABCD3-201ENST00000315713 RASSF7Q02833 373 aa16.12■□□□□ 0.17
ABCD3-201ENST00000315713 C16orf71Q8IYS4 520 aaPredicted RBP16.12■□□□□ 0.17
ABCD3-201ENST00000315713 CARMIL3Q8ND23 1372 aa16.12■□□□□ 0.17
ABCD3-201ENST00000315713 RNMTO43148 476 aaKnown RBP16.11■□□□□ 0.17
ABCD3-201ENST00000315713 CYP19A1P11511 503 aaPredicted RBP16.11■□□□□ 0.17
ABCD3-201ENST00000315713 PRKAR2BP31323 418 aa16.11■□□□□ 0.17
ABCD3-201ENST00000315713 ZBTB1Q9Y2K1 713 aa16.11■□□□□ 0.17
ABCD3-201ENST00000315713 KDM2BQ8NHM5 1336 aa16.11■□□□□ 0.17
ABCD3-201ENST00000315713 NFIXQ14938 502 aa16.1■□□□□ 0.17
ABCD3-201ENST00000315713 MTHFSDQ2M296 383 aaKnown RBP16.1■□□□□ 0.17
ABCD3-201ENST00000315713 RSPH6AQ9H0K4 717 aa16.1■□□□□ 0.17
ABCD3-201ENST00000315713 SLX4Q8IY92 1834 aa16.08■□□□□ 0.17
ABCD3-201ENST00000315713 NEFMP07197 916 aa16.08■□□□□ 0.16
ABCD3-201ENST00000315713 GAS2L2Q8NHY3 880 aa16.08■□□□□ 0.16
ABCD3-201ENST00000315713 NARFQ9UHQ1 456 aa16.08■□□□□ 0.16
ABCD3-201ENST00000315713 ANP32CO43423 234 aa16.07■□□□□ 0.16
ABCD3-201ENST00000315713 FSTL1Q12841 308 aa16.07■□□□□ 0.16
ABCD3-201ENST00000315713 BCL2L12Q9HB09 334 aa16.07■□□□□ 0.16
ABCD3-201ENST00000315713 RRAGCQ9HB90 399 aa16.07■□□□□ 0.16
ABCD3-201ENST00000315713 PRELPP51888 382 aa16.06■□□□□ 0.16
ABCD3-201ENST00000315713 KLRG1Q96E93 195 aa16.06■□□□□ 0.16
ABCD3-201ENST00000315713 ZC3H4Q9UPT8 1303 aaKnown RBP16.05■□□□□ 0.16
ABCD3-201ENST00000315713 PHACTR3Q96KR7 559 aa16.05■□□□□ 0.16
ABCD3-201ENST00000315713 PNNQ9H307 717 aaKnown RBP16.05■□□□□ 0.16
ABCD3-201ENST00000315713 DLG5Q8TDM6 1919 aa16.05■□□□□ 0.16
ABCD3-201ENST00000315713 SERPINB2P05120 415 aa16.04■□□□□ 0.16
ABCD3-201ENST00000315713 CANXP27824 592 aaKnown RBP16.04■□□□□ 0.16
ABCD3-201ENST00000315713 WDR43Q15061 677 aaKnown RBP eCLIP16.04■□□□□ 0.16
ABCD3-201ENST00000315713 GNAT3A8MTJ3 354 aa16.03■□□□□ 0.16
ABCD3-201ENST00000315713 LMNB1P20700 586 aa16.03■□□□□ 0.16
ABCD3-201ENST00000315713 BICDL1Q6ZP65 573 aa16.03■□□□□ 0.16
ABCD3-201ENST00000315713 C2CD5Q86YS7 1000 aa16.03■□□□□ 0.16
ABCD3-201ENST00000315713 VSIG10Q8N0Z9 540 aa16.03■□□□□ 0.16
ABCD3-201ENST00000315713 SMC1BQ8NDV3 1235 aa16.03■□□□□ 0.16
ABCD3-201ENST00000315713 MAPK8IP3Q9UPT6 1336 aa16.02■□□□□ 0.16
ABCD3-201ENST00000315713 TTLL6Q8N841 843 aa16.02■□□□□ 0.16
ABCD3-201ENST00000315713 JMYQ8N9B5 988 aa16.02■□□□□ 0.16
ABCD3-201ENST00000315713 LAMB4A4D0S4 1761 aa16.02■□□□□ 0.15
ABCD3-201ENST00000315713 NFKBIEO00221 500 aa16.01■□□□□ 0.15
ABCD3-201ENST00000315713 EIF5P55010 431 aaKnown RBP16.01■□□□□ 0.15
ABCD3-201ENST00000315713 TTC5Q8N0Z6 440 aa16.01■□□□□ 0.15
ABCD3-201ENST00000315713 HEG1Q9ULI3 1381 aa16■□□□□ 0.15
ABCD3-201ENST00000315713 TBC1D9BQ66K14 1250 aa16■□□□□ 0.15
ABCD3-201ENST00000315713 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
ABCD3-201ENST00000315713 ZNF496Q96IT1 587 aaPredicted RBP16■□□□□ 0.15
ABCD3-201ENST00000315713 GLTPD2A6NH11 291 aa15.99■□□□□ 0.15
ABCD3-201ENST00000315713 H0YIN7 160 aa15.99■□□□□ 0.15
ABCD3-201ENST00000315713 CCDC24Q8N4L8 307 aa15.99■□□□□ 0.15
ABCD3-201ENST00000315713 PLEKHF1Q96S99 279 aa15.99■□□□□ 0.15
ABCD3-201ENST00000315713 ZNF330Q9Y3S2 320 aaPredicted RBP15.99■□□□□ 0.15
ABCD3-201ENST00000315713 SCN4AP35499 1836 aa15.98■□□□□ 0.15
ABCD3-201ENST00000315713 STARD3NLO95772 234 aa15.98■□□□□ 0.15
ABCD3-201ENST00000315713 TEFQ10587 303 aa15.98■□□□□ 0.15
ABCD3-201ENST00000315713 COL13A1Q5TAT6 717 aaPredicted RBP15.98■□□□□ 0.15
ABCD3-201ENST00000315713 A0A087WZG4 1122 aa15.97■□□□□ 0.15
ABCD3-201ENST00000315713 VEGFAP15692 232 aaPredicted RBP15.97■□□□□ 0.15
ABCD3-201ENST00000315713 IL17REQ8NFR9 667 aa15.97■□□□□ 0.15
ABCD3-201ENST00000315713 ZNF622Q969S3 477 aaKnown RBP eCLIP15.97■□□□□ 0.15
ABCD3-201ENST00000315713 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms