RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 NEK4P51957 841 aa10.73□□□□□ -0.69
CTC1-201ENST00000315684 MTHFSDQ2M296 383 aaKnown RBP10.73□□□□□ -0.69
CTC1-201ENST00000315684 HDAC9Q9UKV0 1011 aa10.73□□□□□ -0.69
CTC1-201ENST00000315684 FLIIQ13045 1269 aa10.72□□□□□ -0.69
CTC1-201ENST00000315684 ZC3H12CQ9C0D7 883 aaKnown RBP10.72□□□□□ -0.69
CTC1-201ENST00000315684 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.72□□□□□ -0.694e-7■■■■■ 130
CTC1-201ENST00000315684 HIP1O00291 1037 aa10.72□□□□□ -0.69
CTC1-201ENST00000315684 TPM3P06753 285 aa10.72□□□□□ -0.69
CTC1-201ENST00000315684 MAP3K12Q12852 859 aa10.72□□□□□ -0.69
CTC1-201ENST00000315684 CCDC144CPQ8IYA2 1237 aa10.72□□□□□ -0.69
CTC1-201ENST00000315684 NAPBQ9H115 298 aa10.72□□□□□ -0.69
CTC1-201ENST00000315684 TSHZ3Q63HK5 1081 aa10.72□□□□□ -0.69
CTC1-201ENST00000315684 DDX49Q9Y6V7 483 aaKnown RBP10.72□□□□□ -0.69
CTC1-201ENST00000315684 MBIPQ9NS73 344 aa10.72□□□□□ -0.69
CTC1-201ENST00000315684 GOLIM4O00461 696 aa10.72□□□□□ -0.69
CTC1-201ENST00000315684 PPFIA3O75145 1194 aa10.72□□□□□ -0.69
CTC1-201ENST00000315684 CT47A1Q5JQC4 288 aaPredicted RBP10.71□□□□□ -0.69
CTC1-201ENST00000315684 PCDH11XQ9BZA7 1347 aa10.71□□□□□ -0.69
CTC1-201ENST00000315684 PCDH11YQ9BZA8 1340 aa10.71□□□□□ -0.69
CTC1-201ENST00000315684 TMEM94Q12767 1356 aa10.71□□□□□ -0.69
CTC1-201ENST00000315684 NAP1L1P55209 391 aaKnown RBP10.71□□□□□ -0.69
CTC1-201ENST00000315684 CCAR2Q8N163 923 aaKnown RBP10.71□□□□□ -0.69
CTC1-201ENST00000315684 SSH1Q8WYL5 1049 aa10.71□□□□□ -0.69
CTC1-201ENST00000315684 NUP160Q12769 1436 aa10.71□□□□□ -0.69
CTC1-201ENST00000315684 AKAP4Q5JQC9 854 aa10.71□□□□□ -0.69
CTC1-201ENST00000315684 RAB11FIP4Q86YS3 637 aa10.71□□□□□ -0.69
CTC1-201ENST00000315684 CNBD1Q8NA66 436 aa10.71□□□□□ -0.69
CTC1-201ENST00000315684 ATP6V1DQ9Y5K8 247 aa10.71□□□□□ -0.7
CTC1-201ENST00000315684 EYA1Q99502 592 aa10.71□□□□□ -0.7
CTC1-201ENST00000315684 ATP7AQ04656 1500 aa10.71□□□□□ -0.7
CTC1-201ENST00000315684 HCLS1P14317 486 aaPredicted RBP10.7□□□□□ -0.7
CTC1-201ENST00000315684 C22orf23Q9BZE7 217 aa10.7□□□□□ -0.7
CTC1-201ENST00000315684 NF2P35240 595 aa10.7□□□□□ -0.7
CTC1-201ENST00000315684 ZNF772Q68DY9 489 aaPredicted RBP10.7□□□□□ -0.7
CTC1-201ENST00000315684 BEGAINQ9BUH8 593 aa10.7□□□□□ -0.7
CTC1-201ENST00000315684 DISP1Q96F81 1524 aa10.7□□□□□ -0.7
CTC1-201ENST00000315684 MVPQ14764 893 aaKnown RBP10.7□□□□□ -0.7
CTC1-201ENST00000315684 KRT24Q2M2I5 525 aa10.7□□□□□ -0.7
CTC1-201ENST00000315684 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
CTC1-201ENST00000315684 NYXQ9GZU5 481 aa10.7□□□□□ -0.7
CTC1-201ENST00000315684 FANCIQ9NVI1 1328 aa10.7□□□□□ -0.7
CTC1-201ENST00000315684 H0YIN7 160 aa10.7□□□□□ -0.7
CTC1-201ENST00000315684 TRPC5Q9UL62 973 aaPredicted RBP10.7□□□□□ -0.7
CTC1-201ENST00000315684 BRPF1P55201 1214 aaPredicted RBP10.69□□□□□ -0.7
CTC1-201ENST00000315684 HAND2P61296 217 aa10.69□□□□□ -0.7
CTC1-201ENST00000315684 SLF2Q8IX21 1173 aa10.69□□□□□ -0.7
CTC1-201ENST00000315684 TRIM22Q8IYM9 498 aa10.69□□□□□ -0.7
CTC1-201ENST00000315684 LARP6Q9BRS8 491 aaKnown RBP10.69□□□□□ -0.7
CTC1-201ENST00000315684 SEC63Q9UGP8 760 aaKnown RBP10.69□□□□□ -0.7
CTC1-201ENST00000315684 PTPRKQ15262 1439 aa10.69□□□□□ -0.7
CTC1-201ENST00000315684 DHX8Q14562 1220 aaKnown RBP10.69□□□□□ -0.7
CTC1-201ENST00000315684 ODF2Q5BJF6 829 aa10.69□□□□□ -0.7
CTC1-201ENST00000315684 TTC16Q8NEE8 873 aa10.69□□□□□ -0.7
CTC1-201ENST00000315684 CABP5Q9NP86 173 aa10.69□□□□□ -0.7
CTC1-201ENST00000315684 ABCA5Q8WWZ7 1642 aa10.69□□□□□ -0.7
CTC1-201ENST00000315684 DDX11Q96FC9 970 aa10.69□□□□□ -0.7
CTC1-201ENST00000315684 IMMTQ16891 758 aaKnown RBP10.69□□□□□ -0.7
CTC1-201ENST00000315684 JAKMIP1Q96N16 626 aaKnown RBP10.69□□□□□ -0.7
CTC1-201ENST00000315684 HOOK1Q9UJC3 728 aaKnown RBP10.69□□□□□ -0.7
CTC1-201ENST00000315684 IRS4O14654 1257 aaPredicted RBP10.68□□□□□ -0.7
CTC1-201ENST00000315684 RBM17Q96I25 401 aaKnown RBP10.68□□□□□ -0.7
CTC1-201ENST00000315684 YTHDC2Q9H6S0 1430 aaKnown RBP10.68□□□□□ -0.7
CTC1-201ENST00000315684 MAP3K19Q56UN5 1328 aa10.68□□□□□ -0.7
CTC1-201ENST00000315684 TPM1P09493 284 aa10.68□□□□□ -0.7
CTC1-201ENST00000315684 LARGE2Q8N3Y3 721 aa10.68□□□□□ -0.7
CTC1-201ENST00000315684 IP6K1Q92551 441 aa10.68□□□□□ -0.7
CTC1-201ENST00000315684 A1BGP04217 495 aa10.67□□□□□ -0.7
CTC1-201ENST00000315684 HLA-DOAP06340 250 aa10.67□□□□□ -0.7
CTC1-201ENST00000315684 GCC1Q96CN9 775 aa10.67□□□□□ -0.7
CTC1-201ENST00000315684 CWF19L2Q2TBE0 894 aaKnown RBP10.67□□□□□ -0.7
CTC1-201ENST00000315684 CYP46A1Q9Y6A2 500 aa10.67□□□□□ -0.7
CTC1-201ENST00000315684 ANKRD20A12PQ8NF67 263 aa10.67□□□□□ -0.7
CTC1-201ENST00000315684 POLKQ9UBT6 870 aa10.67□□□□□ -0.7
CTC1-201ENST00000315684 KDM6BO15054 1643 aa10.67□□□□□ -0.7
CTC1-201ENST00000315684 CCDC73Q6ZRK6 1079 aa10.67□□□□□ -0.7
CTC1-201ENST00000315684 CHD1LQ86WJ1 897 aa10.67□□□□□ -0.7
CTC1-201ENST00000315684 KIF1BPQ96EK5 621 aa10.67□□□□□ -0.7
CTC1-201ENST00000315684 TTLL5Q6EMB2 1281 aa10.67□□□□□ -0.7
CTC1-201ENST00000315684 FAM89AQ96GI7 184 aa10.67□□□□□ -0.7
CTC1-201ENST00000315684 ZNF287Q9HBT7 754 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 RNMTO43148 476 aaKnown RBP10.66□□□□□ -0.7
CTC1-201ENST00000315684 UFL1O94874 794 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 LMBR1LQ6UX01 489 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 WDR70Q9NW82 654 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 BAG3O95817 575 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 ZNF804AQ7Z570 1209 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 CCDC87Q9NVE4 849 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 KRT27Q7Z3Y8 459 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 CYP7A1P22680 504 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 EIF6P56537 245 aaKnown RBP10.66□□□□□ -0.7
CTC1-201ENST00000315684 HOMER1Q86YM7 354 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 LGR6Q9HBX8 967 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 PSDA5PKW4 1024 aaPredicted RBP10.66□□□□□ -0.7
CTC1-201ENST00000315684 DCAF5Q96JK2 942 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 SDF4Q9BRK5 362 aa10.66□□□□□ -0.7
CTC1-201ENST00000315684 TSPY2A6NKD2 308 aa10.65□□□□□ -0.7
CTC1-201ENST00000315684 TXLNAP40222 546 aa10.65□□□□□ -0.7
CTC1-201ENST00000315684 GUCY1B3Q02153 619 aa10.65□□□□□ -0.7
CTC1-201ENST00000315684 PPM1FP49593 454 aaPredicted RBP10.65□□□□□ -0.7
CTC1-201ENST00000315684 SAP30BPQ9UHR5 308 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms