RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 MTHFSDQ2M296 383 aaKnown RBP10.99□□□□□ -0.65
TPM3-203ENST00000312970 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
TPM3-203ENST00000312970 PARP3Q9Y6F1 533 aa10.99□□□□□ -0.65
TPM3-203ENST00000312970 C4AP0C0L4 1744 aa10.98□□□□□ -0.65
TPM3-203ENST00000312970 BRCA1P38398 1863 aaKnown RBP10.98□□□□□ -0.65
TPM3-203ENST00000312970 HTRA3P83110 453 aa10.98□□□□□ -0.65
TPM3-203ENST00000312970 CNGB1Q14028 1251 aaPredicted RBP10.98□□□□□ -0.65
TPM3-203ENST00000312970 NBR1Q14596 966 aa10.98□□□□□ -0.65
TPM3-203ENST00000312970 INTS5Q6P9B9 1019 aaKnown RBP10.98□□□□□ -0.65
TPM3-203ENST00000312970 CCDC87Q9NVE4 849 aa10.98□□□□□ -0.65
TPM3-203ENST00000312970 NPC1L1Q9UHC9 1359 aa10.98□□□□□ -0.65
TPM3-203ENST00000312970 A0A0G2JLW4 131 aa10.97□□□□□ -0.65
TPM3-203ENST00000312970 TOMM70O94826 608 aa10.97□□□□□ -0.65
TPM3-203ENST00000312970 SLC39A6Q13433 755 aa10.97□□□□□ -0.65
TPM3-203ENST00000312970 PXDNLA1KZ92 1463 aa10.97□□□□□ -0.65
TPM3-203ENST00000312970 SCN11AQ9UI33 1791 aa10.97□□□□□ -0.65
TPM3-203ENST00000312970 MYH14Q7Z406 1995 aaKnown RBP10.97□□□□□ -0.65
TPM3-203ENST00000312970 SPDYE4A6NLX3 237 aa10.96□□□□□ -0.65
TPM3-203ENST00000312970 U2SURPO15042 1029 aaKnown RBP10.96□□□□□ -0.65
TPM3-203ENST00000312970 ZPR1O75312 459 aa10.96□□□□□ -0.65
TPM3-203ENST00000312970 DNAJC10Q8IXB1 793 aa10.96□□□□□ -0.65
TPM3-203ENST00000312970 SRP68Q9UHB9 627 aaKnown RBP10.96□□□□□ -0.65
TPM3-203ENST00000312970 C10orf71Q711Q0 1435 aa10.95□□□□□ -0.66
TPM3-203ENST00000312970 USP42Q9H9J4 1324 aaKnown RBP10.95□□□□□ -0.66
TPM3-203ENST00000312970 CYP19A1P11511 503 aaPredicted RBP10.95□□□□□ -0.66
TPM3-203ENST00000312970 DPEP1P16444 411 aa10.95□□□□□ -0.66
TPM3-203ENST00000312970 NMRK2Q9NPI5 230 aa10.95□□□□□ -0.66
TPM3-203ENST00000312970 BCS1LQ9Y276 419 aa10.95□□□□□ -0.66
TPM3-203ENST00000312970 ARFGEF1Q9Y6D6 1849 aa10.95□□□□□ -0.66
TPM3-203ENST00000312970 GNAT3A8MTJ3 354 aa10.94□□□□□ -0.66
TPM3-203ENST00000312970 TM4SF1P30408 202 aa10.94□□□□□ -0.66
TPM3-203ENST00000312970 CACNB1Q02641 598 aaPredicted RBP10.94□□□□□ -0.66
TPM3-203ENST00000312970 ARHGAP27Q6ZUM4 889 aa10.94□□□□□ -0.66
TPM3-203ENST00000312970 GAS2L2Q8NHY3 880 aa10.94□□□□□ -0.66
TPM3-203ENST00000312970 KLRG1Q96E93 195 aa10.94□□□□□ -0.66
TPM3-203ENST00000312970 CFAP53Q96M91 514 aa10.94□□□□□ -0.66
TPM3-203ENST00000312970 WDR90Q96KV7 1748 aa10.94□□□□□ -0.66
TPM3-203ENST00000312970 VIRMAQ69YN4 1812 aaKnown RBP10.93□□□□□ -0.66
TPM3-203ENST00000312970 TJP1Q07157 1748 aa10.93□□□□□ -0.66
TPM3-203ENST00000312970 FCHSD2O94868 740 aa10.93□□□□□ -0.66
TPM3-203ENST00000312970 KCNA3P22001 575 aa10.93□□□□□ -0.66
TPM3-203ENST00000312970 TEFQ10587 303 aa10.93□□□□□ -0.66
TPM3-203ENST00000312970 USPL1Q5W0Q7 1092 aa10.93□□□□□ -0.66
TPM3-203ENST00000312970 TTC5Q8N0Z6 440 aa10.93□□□□□ -0.66
TPM3-203ENST00000312970 JMYQ8N9B5 988 aa10.93□□□□□ -0.66
TPM3-203ENST00000312970 IL17REQ8NFR9 667 aa10.93□□□□□ -0.66
TPM3-203ENST00000312970 PIM2Q9P1W9 311 aa10.93□□□□□ -0.66
TPM3-203ENST00000312970 NARFQ9UHQ1 456 aa10.93□□□□□ -0.66
TPM3-203ENST00000312970 SOS1Q07889 1333 aaPredicted RBP10.92□□□□□ -0.66
TPM3-203ENST00000312970 STARD3NLO95772 234 aa10.92□□□□□ -0.66
TPM3-203ENST00000312970 PRELPP51888 382 aa10.92□□□□□ -0.66
TPM3-203ENST00000312970 DDR1Q08345 913 aa10.92□□□□□ -0.66
TPM3-203ENST00000312970 TNS4Q8IZW8 715 aa10.92□□□□□ -0.66
TPM3-203ENST00000312970 TEX13AQ9BXU3 409 aaPredicted RBP10.92□□□□□ -0.66
TPM3-203ENST00000312970 NUDCQ9Y266 331 aa10.92□□□□□ -0.66
TPM3-203ENST00000312970 MRC1P22897 1456 aa10.92□□□□□ -0.66
TPM3-203ENST00000312970 POLRMTO00411 1230 aaKnown RBP10.91□□□□□ -0.66
TPM3-203ENST00000312970 ZNF790Q6PG37 636 aa10.91□□□□□ -0.66
TPM3-203ENST00000312970 ZBTB1Q9Y2K1 713 aa10.91□□□□□ -0.66
TPM3-203ENST00000312970 ADAMTS7Q9UKP4 1686 aa10.9□□□□□ -0.66
TPM3-203ENST00000312970 COL3A1P02461 1466 aaPredicted RBP10.9□□□□□ -0.66
TPM3-203ENST00000312970 A0A087WZG4 1122 aa10.9□□□□□ -0.66
TPM3-203ENST00000312970 CANXP27824 592 aaKnown RBP10.9□□□□□ -0.66
TPM3-203ENST00000312970 DALRD3Q5D0E6 543 aaKnown RBP10.9□□□□□ -0.66
TPM3-203ENST00000312970 SAMD1Q6SPF0 538 aaPredicted RBP10.9□□□□□ -0.66
TPM3-203ENST00000312970 RBM46Q8TBY0 533 aaKnown RBP10.9□□□□□ -0.66
TPM3-203ENST00000312970 ZNF496Q96IT1 587 aaPredicted RBP10.9□□□□□ -0.66
TPM3-203ENST00000312970 PHACTR3Q96KR7 559 aa10.9□□□□□ -0.66
TPM3-203ENST00000312970 COL15A1P39059 1388 aa10.9□□□□□ -0.67
TPM3-203ENST00000312970 KCPQ6ZWJ8 1503 aa10.89□□□□□ -0.67
TPM3-203ENST00000312970 PPP2R1AP30153 589 aa10.89□□□□□ -0.67
TPM3-203ENST00000312970 CHRNA5P30532 468 aa10.89□□□□□ -0.67
TPM3-203ENST00000312970 PRKAR2BP31323 418 aa10.89□□□□□ -0.67
TPM3-203ENST00000312970 EIF5P55010 431 aaKnown RBP10.89□□□□□ -0.67
TPM3-203ENST00000312970 NFIXQ14938 502 aa10.89□□□□□ -0.67
TPM3-203ENST00000312970 SPRYD3Q8NCJ5 442 aa10.89□□□□□ -0.67
TPM3-203ENST00000312970 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
TPM3-203ENST00000312970 SBF1O95248 1867 aa10.88□□□□□ -0.67
TPM3-203ENST00000312970 SERPINB2P05120 415 aa10.88□□□□□ -0.67
TPM3-203ENST00000312970 U2AF1L5P0DN76 240 aaPredicted RBP10.88□□□□□ -0.67
TPM3-203ENST00000312970 U2AF1Q01081 240 aaKnown RBP eCLIP10.88□□□□□ -0.677e-10■■□□□ 13
TPM3-203ENST00000312970 FMNL2Q96PY5 1086 aa10.88□□□□□ -0.67
TPM3-203ENST00000312970 BCL2L12Q9HB09 334 aa10.88□□□□□ -0.67
TPM3-203ENST00000312970 HEG1Q9ULI3 1381 aa10.88□□□□□ -0.67
TPM3-203ENST00000312970 AFDNP55196 1824 aaKnown RBP10.87□□□□□ -0.67
TPM3-203ENST00000312970 BTBD11A6QL63 1104 aa10.87□□□□□ -0.67
TPM3-203ENST00000312970 NPM2Q86SE8 214 aaKnown RBP10.87□□□□□ -0.67
TPM3-203ENST00000312970 TSHZ2Q9NRE2 1034 aa10.87□□□□□ -0.67
TPM3-203ENST00000312970 CEMIPQ8WUJ3 1361 aa10.87□□□□□ -0.67
TPM3-203ENST00000312970 TNRC6CQ9HCJ0 1690 aaKnown RBP10.86□□□□□ -0.67
TPM3-203ENST00000312970 IL6STP40189 918 aaPredicted RBP10.86□□□□□ -0.67
TPM3-203ENST00000312970 FSTL1Q12841 308 aa10.86□□□□□ -0.67
TPM3-203ENST00000312970 C9orf131Q5VYM1 1079 aa10.86□□□□□ -0.67
TPM3-203ENST00000312970 BICDL1Q6ZP65 573 aa10.86□□□□□ -0.67
TPM3-203ENST00000312970 RTF1Q92541 710 aaKnown RBP10.86□□□□□ -0.67
TPM3-203ENST00000312970 RRAGCQ9HB90 399 aa10.86□□□□□ -0.67
TPM3-203ENST00000312970 TBC1D2BQ9UPU7 963 aa10.86□□□□□ -0.67
TPM3-203ENST00000312970 UBR2Q8IWV8 1755 aa10.85□□□□□ -0.67
TPM3-203ENST00000312970 DLEC1Q9Y238 1755 aa10.85□□□□□ -0.67
TPM3-203ENST00000312970 H0YIN7 160 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms