RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 SALL3Q9BXA9 1300 aa28.28■■■□□ 2.12
CTSF-201ENST00000310325 KIF2CQ99661 725 aa28.28■■■□□ 2.12
CTSF-201ENST00000310325 C5P01031 1676 aa28.27■■■□□ 2.12
CTSF-201ENST00000310325 PRAMEF22A3QJZ6 481 aa28.27■■■□□ 2.12
CTSF-201ENST00000310325 FRAT2O75474 233 aaPredicted RBP28.27■■■□□ 2.12
CTSF-201ENST00000310325 CASC1Q6TDU7 716 aa28.26■■■□□ 2.12
CTSF-201ENST00000310325 MRC1P22897 1456 aa28.26■■■□□ 2.12
CTSF-201ENST00000310325 PROSER3Q2NL68 480 aa28.26■■■□□ 2.11
CTSF-201ENST00000310325 ZNF790Q6PG37 636 aa28.26■■■□□ 2.11
CTSF-201ENST00000310325 HYPKQ9NX55 129 aa28.26■■■□□ 2.11
CTSF-201ENST00000310325 NBPF7P0C2Y1 421 aaPredicted RBP28.25■■■□□ 2.11
CTSF-201ENST00000310325 POLA2Q14181 598 aa28.25■■■□□ 2.11
CTSF-201ENST00000310325 KSR2Q6VAB6 950 aa28.24■■■□□ 2.11
CTSF-201ENST00000310325 PPP1R42Q7Z4L9 355 aa28.24■■■□□ 2.11
CTSF-201ENST00000310325 MAP3K2Q9Y2U5 619 aa28.23■■■□□ 2.11
CTSF-201ENST00000310325 DDX21Q9NR30 783 aaKnown RBP eCLIP28.23■■■□□ 2.11
CTSF-201ENST00000310325 ZNF335Q9H4Z2 1342 aaPredicted RBP28.22■■■□□ 2.11
CTSF-201ENST00000310325 ALDH1L1O75891 902 aa28.22■■■□□ 2.11
CTSF-201ENST00000310325 MX1P20591 662 aa28.22■■■□□ 2.11
CTSF-201ENST00000310325 SLC39A6Q13433 755 aa28.22■■■□□ 2.11
CTSF-201ENST00000310325 SPRYD3Q8NCJ5 442 aa28.22■■■□□ 2.11
CTSF-201ENST00000310325 DCAF5Q96JK2 942 aa28.22■■■□□ 2.11
CTSF-201ENST00000310325 PARP4Q9UKK3 1724 aaKnown RBP28.22■■■□□ 2.11
CTSF-201ENST00000310325 SOS2Q07890 1332 aaPredicted RBP28.22■■■□□ 2.11
CTSF-201ENST00000310325 NFATC2IPQ8NCF5 419 aa28.21■■■□□ 2.11
CTSF-201ENST00000310325 CYP27B1O15528 508 aa28.21■■■□□ 2.11
CTSF-201ENST00000310325 RAB11FIP3O75154 756 aa28.21■■■□□ 2.11
CTSF-201ENST00000310325 SLAIN2Q9P270 581 aa28.21■■■□□ 2.11
CTSF-201ENST00000310325 ABCA3Q99758 1704 aa28.2■■■□□ 2.1
CTSF-201ENST00000310325 SRGAP3O43295 1099 aa28.19■■■□□ 2.1
CTSF-201ENST00000310325 HSP90AB1P08238 724 aaKnown RBP28.19■■■□□ 2.1
CTSF-201ENST00000310325 USP26Q9BXU7 913 aa28.19■■■□□ 2.1
CTSF-201ENST00000310325 STAP2Q9UGK3 403 aa28.19■■■□□ 2.1
CTSF-201ENST00000310325 DDX58O95786 925 aaKnown RBP28.18■■■□□ 2.1
CTSF-201ENST00000310325 PDIA6Q15084 440 aa28.18■■■□□ 2.1
CTSF-201ENST00000310325 SURF6O75683 361 aaKnown RBP28.18■■■□□ 2.1
CTSF-201ENST00000310325 PRDM11Q9NQV5 511 aa28.18■■■□□ 2.1
CTSF-201ENST00000310325 AOX1Q06278 1338 aa28.17■■■□□ 2.1
CTSF-201ENST00000310325 TSHZ3Q63HK5 1081 aa28.16■■■□□ 2.1
CTSF-201ENST00000310325 CHMP5Q9NZZ3 219 aa28.16■■■□□ 2.1
CTSF-201ENST00000310325 WDR17Q8IZU2 1322 aa28.16■■■□□ 2.1
CTSF-201ENST00000310325 REC8O95072 547 aa28.15■■■□□ 2.1
CTSF-201ENST00000310325 MTX1Q13505 466 aa28.15■■■□□ 2.1
CTSF-201ENST00000310325 C9orf78Q9NZ63 289 aaPredicted RBP28.15■■■□□ 2.1
CTSF-201ENST00000310325 LINS1Q8NG48 757 aa28.14■■■□□ 2.1
CTSF-201ENST00000310325 ZNF496Q96IT1 587 aaPredicted RBP28.14■■■□□ 2.1
CTSF-201ENST00000310325 HDAC5Q9UQL6 1122 aa28.14■■■□□ 2.1
CTSF-201ENST00000310325 ERC2O15083 957 aa28.14■■■□□ 2.09
CTSF-201ENST00000310325 TTC5Q8N0Z6 440 aa28.14■■■□□ 2.09
CTSF-201ENST00000310325 COL5A2P05997 1499 aaPredicted RBP28.13■■■□□ 2.09
CTSF-201ENST00000310325 RHPN1Q8TCX5 695 aa28.13■■■□□ 2.09
CTSF-201ENST00000310325 KIF1BPQ96EK5 621 aa28.13■■■□□ 2.09
CTSF-201ENST00000310325 RBM42Q9BTD8 480 aaKnown RBP28.13■■■□□ 2.09
CTSF-201ENST00000310325 IL1RAPL2Q9NP60 686 aa28.13■■■□□ 2.09
CTSF-201ENST00000310325 CWF19L2Q2TBE0 894 aaKnown RBP28.13■■■□□ 2.09
CTSF-201ENST00000310325 HSP90AB4PQ58FF6 505 aa28.13■■■□□ 2.09
CTSF-201ENST00000310325 AIMP1Q12904 312 aaKnown RBP28.12■■■□□ 2.09
CTSF-201ENST00000310325 RABEP1Q15276 862 aa28.12■■■□□ 2.09
CTSF-201ENST00000310325 NHSL1Q5SYE7 1610 aa28.11■■■□□ 2.09
CTSF-201ENST00000310325 CD2BP2O95400 341 aaKnown RBP28.11■■■□□ 2.09
CTSF-201ENST00000310325 LAMB4A4D0S4 1761 aa28.11■■■□□ 2.09
CTSF-201ENST00000310325 K7ELQ4 463 aaPredicted RBP28.11■■■□□ 2.09
CTSF-201ENST00000310325 SNRPA1P09661 255 aaKnown RBP28.11■■■□□ 2.09
CTSF-201ENST00000310325 CABP4P57796 275 aa28.1■■■□□ 2.09
CTSF-201ENST00000310325 TOM1L2Q6ZVM7 507 aa28.1■■■□□ 2.09
CTSF-201ENST00000310325 FMNL2Q96PY5 1086 aa28.1■■■□□ 2.09
CTSF-201ENST00000310325 GLI3P10071 1580 aa28.09■■■□□ 2.09
CTSF-201ENST00000310325 UTYO14607 1347 aa28.09■■■□□ 2.09
CTSF-201ENST00000310325 DDIT3P35638 169 aa28.09■■■□□ 2.09
CTSF-201ENST00000310325 PCDH11XQ9BZA7 1347 aa28.09■■■□□ 2.09
CTSF-201ENST00000310325 PCDH11YQ9BZA8 1340 aa28.09■■■□□ 2.09
CTSF-201ENST00000310325 AK9Q5TCS8 1911 aa28.09■■■□□ 2.09
CTSF-201ENST00000310325 MYL6BP14649 208 aa28.08■■■□□ 2.09
CTSF-201ENST00000310325 LARP1Q6PKG0 1096 aaKnown RBP28.08■■■□□ 2.09
CTSF-201ENST00000310325 RIC3Q7Z5B4 369 aa28.08■■■□□ 2.09
CTSF-201ENST00000310325 TRIM6-TRIM34B2RNG4 842 aa28.08■■■□□ 2.08
CTSF-201ENST00000310325 GRM8O00222 908 aa28.08■■■□□ 2.08
CTSF-201ENST00000310325 GSE1Q14687 1217 aa28.08■■■□□ 2.08
CTSF-201ENST00000310325 NUTM1Q86Y26 1132 aa28.08■■■□□ 2.08
CTSF-201ENST00000310325 XAGE3Q8WTP9 111 aa28.06■■■□□ 2.08
CTSF-201ENST00000310325 RILPL2Q969X0 211 aa28.06■■■□□ 2.08
CTSF-201ENST00000310325 ZCRB1Q8TBF4 217 aaKnown RBP28.06■■■□□ 2.08
CTSF-201ENST00000310325 ESYT1Q9BSJ8 1104 aa28.06■■■□□ 2.08
CTSF-201ENST00000310325 USP16Q9Y5T5 823 aa28.06■■■□□ 2.08
CTSF-201ENST00000310325 NEXNQ0ZGT2 675 aa28.04■■■□□ 2.08
CTSF-201ENST00000310325 COPS6Q7L5N1 327 aa28.04■■■□□ 2.08
CTSF-201ENST00000310325 SHANK3Q9BYB0 1731 aa28.04■■■□□ 2.08
CTSF-201ENST00000310325 IGKV5-2P06315 115 aa28.04■■■□□ 2.08
CTSF-201ENST00000310325 CHMLP26374 656 aa28.04■■■□□ 2.08
CTSF-201ENST00000310325 LRP10Q7Z4F1 713 aa28.04■■■□□ 2.08
CTSF-201ENST00000310325 CIZ1Q9ULV3 898 aaPredicted RBP28.04■■■□□ 2.08
CTSF-201ENST00000310325 OS9Q13438 667 aaPredicted RBP28.03■■■□□ 2.08
CTSF-201ENST00000310325 SUCLG2Q96I99 432 aa28.03■■■□□ 2.08
CTSF-201ENST00000310325 UBR2Q8IWV8 1755 aa28.03■■■□□ 2.08
CTSF-201ENST00000310325 UNC5CLQ8IV45 518 aa28.02■■■□□ 2.08
CTSF-201ENST00000310325 PI4K2BQ8TCG2 481 aa28.02■■■□□ 2.08
CTSF-201ENST00000310325 CARD10Q9BWT7 1032 aa28.02■■■□□ 2.08
CTSF-201ENST00000310325 HSP90AA1P07900 732 aaKnown RBP28.02■■■□□ 2.08
CTSF-201ENST00000310325 METTL22Q9BUU2 404 aaPredicted RBP28.02■■■□□ 2.08
CTSF-201ENST00000310325 ARFGEF2Q9Y6D5 1785 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms