RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 ZNF853P0CG23 659 aa15.93■□□□□ 0.14
VANGL1-201ENST00000310260 SLFN5Q08AF3 891 aa15.93■□□□□ 0.14
VANGL1-201ENST00000310260 SMARCC1Q92922 1105 aaPredicted RBP15.93■□□□□ 0.14
VANGL1-201ENST00000310260 ITGB4P16144 1822 aa15.93■□□□□ 0.14
VANGL1-201ENST00000310260 PRAMEF22A3QJZ6 481 aa15.93■□□□□ 0.14
VANGL1-201ENST00000310260 IL16Q14005 1332 aa15.93■□□□□ 0.14
VANGL1-201ENST00000310260 ATP6V1AP38606 617 aa15.92■□□□□ 0.14
VANGL1-201ENST00000310260 FMNL2Q96PY5 1086 aa15.92■□□□□ 0.14
VANGL1-201ENST00000310260 ANTXR1Q9H6X2 564 aa15.92■□□□□ 0.14
VANGL1-201ENST00000310260 LOC102724428A0A0B4J2F2 783 aa15.92■□□□□ 0.14
VANGL1-201ENST00000310260 SIK1P57059 783 aa15.92■□□□□ 0.14
VANGL1-201ENST00000310260 EIF4A1P60842 406 aaKnown RBP15.92■□□□□ 0.14
VANGL1-201ENST00000310260 EXOSC9Q06265 439 aaKnown RBP15.92■□□□□ 0.14
VANGL1-201ENST00000310260 UPF1Q92900 1129 aaKnown RBP eCLIP15.92■□□□□ 0.14
VANGL1-201ENST00000310260 ZMYND15Q9H091 742 aa15.92■□□□□ 0.14
VANGL1-201ENST00000310260 EIF2S2P20042 333 aaKnown RBP15.91■□□□□ 0.14
VANGL1-201ENST00000310260 C8orf58Q8NAV2 365 aa15.91■□□□□ 0.14
VANGL1-201ENST00000310260 CCNL1Q9UK58 526 aaPredicted RBP15.91■□□□□ 0.14
VANGL1-201ENST00000310260 SBF2Q86WG5 1849 aa15.91■□□□□ 0.14
VANGL1-201ENST00000310260 CLCN1P35523 988 aa15.91■□□□□ 0.14
VANGL1-201ENST00000310260 EZH2Q15910 746 aaKnown RBP15.91■□□□□ 0.14
VANGL1-201ENST00000310260 VSIG10Q8N0Z9 540 aa15.91■□□□□ 0.14
VANGL1-201ENST00000310260 TSPYL6Q8N831 410 aa15.91■□□□□ 0.14
VANGL1-201ENST00000310260 FSD2A1L4K1 749 aa15.9■□□□□ 0.14
VANGL1-201ENST00000310260 BAG6P46379 1132 aa15.9■□□□□ 0.14
VANGL1-201ENST00000310260 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.9■□□□□ 0.14
VANGL1-201ENST00000310260 NAP1L5Q96NT1 182 aaPredicted RBP15.9■□□□□ 0.14
VANGL1-201ENST00000310260 SLC4A9Q96Q91 983 aa15.9■□□□□ 0.14
VANGL1-201ENST00000310260 SLKQ9H2G2 1235 aaPredicted RBP15.9■□□□□ 0.14
VANGL1-201ENST00000310260 MRC1P22897 1456 aa15.89■□□□□ 0.14
VANGL1-201ENST00000310260 RRP9O43818 475 aaKnown RBP15.89■□□□□ 0.13
VANGL1-201ENST00000310260 XRCC6P12956 609 aaKnown RBP eCLIP15.89■□□□□ 0.13
VANGL1-201ENST00000310260 BECN1Q14457 450 aa15.89■□□□□ 0.13
VANGL1-201ENST00000310260 BTAF1O14981 1849 aa15.89■□□□□ 0.13
VANGL1-201ENST00000310260 TXNRD1Q16881 649 aa15.89■□□□□ 0.13
VANGL1-201ENST00000310260 DNAJC10Q8IXB1 793 aa15.89■□□□□ 0.13
VANGL1-201ENST00000310260 ADAMTS7Q9UKP4 1686 aa15.89■□□□□ 0.13
VANGL1-201ENST00000310260 SEC24BO95487 1268 aa15.88■□□□□ 0.13
VANGL1-201ENST00000310260 PIP4K2AP48426 406 aaPredicted RBP15.88■□□□□ 0.13
VANGL1-201ENST00000310260 PROM2Q8N271 834 aa15.88■□□□□ 0.13
VANGL1-201ENST00000310260 BABAM1Q9NWV8 329 aa15.88■□□□□ 0.13
VANGL1-201ENST00000310260 NHSQ6T4R5 1651 aa15.88■□□□□ 0.13
VANGL1-201ENST00000310260 SNRPA1P09661 255 aaKnown RBP15.88■□□□□ 0.13
VANGL1-201ENST00000310260 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
VANGL1-201ENST00000310260 USP16Q9Y5T5 823 aa15.88■□□□□ 0.13
VANGL1-201ENST00000310260 GIGYF1O75420 1035 aaPredicted RBP15.87■□□□□ 0.13
VANGL1-201ENST00000310260 ITPK1Q13572 414 aa15.87■□□□□ 0.13
VANGL1-201ENST00000310260 PLSCR1O15162 318 aa15.87■□□□□ 0.13
VANGL1-201ENST00000310260 HSP90AA2PQ14568 343 aaPredicted RBP15.87■□□□□ 0.13
VANGL1-201ENST00000310260 TWISTNBQ3B726 338 aaPredicted RBP15.87■□□□□ 0.13
VANGL1-201ENST00000310260 CCDC125Q86Z20 511 aa15.87■□□□□ 0.13
VANGL1-201ENST00000310260 ZNF330Q9Y3S2 320 aaPredicted RBP15.87■□□□□ 0.13
VANGL1-201ENST00000310260 PANK2Q9BZ23 570 aa15.86■□□□□ 0.13
VANGL1-201ENST00000310260 HEG1Q9ULI3 1381 aa15.86■□□□□ 0.13
VANGL1-201ENST00000310260 GOLGA6L3A6NEY3 463 aa15.85■□□□□ 0.13
VANGL1-201ENST00000310260 HSP90AA1P07900 732 aaKnown RBP15.85■□□□□ 0.13
VANGL1-201ENST00000310260 ARXQ96QS3 562 aa15.85■□□□□ 0.13
VANGL1-201ENST00000310260 CAMKK2Q96RR4 588 aa15.85■□□□□ 0.13
VANGL1-201ENST00000310260 SMIM5Q71RC9 77 aa15.85■□□□□ 0.13
VANGL1-201ENST00000310260 TRMT2AQ8IZ69 625 aaKnown RBP15.85■□□□□ 0.13
VANGL1-201ENST00000310260 SIPA1L3O60292 1781 aaPredicted RBP15.85■□□□□ 0.13
VANGL1-201ENST00000310260 A1BGP04217 495 aa15.84■□□□□ 0.13
VANGL1-201ENST00000310260 LINC00116Q8NCU8 138 aa15.84■□□□□ 0.13
VANGL1-201ENST00000310260 STARD3NLO95772 234 aa15.84■□□□□ 0.13
VANGL1-201ENST00000310260 IGHDP01880 384 aa15.84■□□□□ 0.13
VANGL1-201ENST00000310260 CANXP27824 592 aaKnown RBP15.84■□□□□ 0.13
VANGL1-201ENST00000310260 ANXA1P04083 346 aa15.83■□□□□ 0.13
VANGL1-201ENST00000310260 HDGFL1Q5TGJ6 251 aa15.83■□□□□ 0.13
VANGL1-201ENST00000310260 KCPQ6ZWJ8 1503 aa15.83■□□□□ 0.12
VANGL1-201ENST00000310260 MYL6BP14649 208 aa15.83■□□□□ 0.12
VANGL1-201ENST00000310260 BCL2L13Q9BXK5 485 aa15.83■□□□□ 0.12
VANGL1-201ENST00000310260 SLC27A3Q5K4L6 730 aa15.82■□□□□ 0.12
VANGL1-201ENST00000310260 VAMP4O75379 141 aa15.82■□□□□ 0.12
VANGL1-201ENST00000310260 CYP19A1P11511 503 aaPredicted RBP15.82■□□□□ 0.12
VANGL1-201ENST00000310260 CRKLP46109 303 aaKnown RBP15.82■□□□□ 0.12
VANGL1-201ENST00000310260 TEX13AQ9BXU3 409 aaPredicted RBP15.82■□□□□ 0.12
VANGL1-201ENST00000310260 PHF14O94880 888 aa15.8■□□□□ 0.12
VANGL1-201ENST00000310260 TNS1Q9HBL0 1735 aaKnown RBP15.8■□□□□ 0.12
VANGL1-201ENST00000310260 GNPATO15228 680 aa15.8■□□□□ 0.12
VANGL1-201ENST00000310260 AK7Q96M32 723 aa15.8■□□□□ 0.12
VANGL1-201ENST00000310260 TBC1D2Q9BYX2 928 aa15.8■□□□□ 0.12
VANGL1-201ENST00000310260 CHPF2Q9P2E5 772 aa15.8■□□□□ 0.12
VANGL1-201ENST00000310260 KDM3BQ7LBC6 1761 aa15.8■□□□□ 0.12
VANGL1-201ENST00000310260 TBC1D32Q96NH3 1257 aa15.79■□□□□ 0.12
VANGL1-201ENST00000310260 TFCP2L1Q9NZI6 479 aa15.79■□□□□ 0.12
VANGL1-201ENST00000310260 AIMP1Q12904 312 aaKnown RBP15.79■□□□□ 0.12
VANGL1-201ENST00000310260 PROSER3Q2NL68 480 aa15.79■□□□□ 0.12
VANGL1-201ENST00000310260 CCDC30Q5VVM6 783 aa15.79■□□□□ 0.12
VANGL1-201ENST00000310260 CCDC87Q9NVE4 849 aa15.79■□□□□ 0.12
VANGL1-201ENST00000310260 ZBTB1Q9Y2K1 713 aa15.79■□□□□ 0.12
VANGL1-201ENST00000310260 SLC4A2P04920 1241 aa15.78■□□□□ 0.12
VANGL1-201ENST00000310260 INTS5Q6P9B9 1019 aaKnown RBP15.78■□□□□ 0.12
VANGL1-201ENST00000310260 STK31Q9BXU1 1019 aa15.78■□□□□ 0.12
VANGL1-201ENST00000310260 BCAR3O75815 825 aa15.78■□□□□ 0.12
VANGL1-201ENST00000310260 MCM4P33991 863 aa15.78■□□□□ 0.12
VANGL1-201ENST00000310260 PAPPAQ13219 1627 aa15.77■□□□□ 0.12
VANGL1-201ENST00000310260 NBPF26B4DH59 902 aa15.77■□□□□ 0.12
VANGL1-201ENST00000310260 ZNF827Q17R98 1081 aa15.77■□□□□ 0.12
VANGL1-201ENST00000310260 NBPF14Q5TI25 921 aa15.77■□□□□ 0.12
VANGL1-201ENST00000310260 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms