RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 SNRPA1P09661 255 aaKnown RBP14.36□□□□□ -0.11
CTDSPL-202ENST00000310189 HYPKQ9NX55 129 aa14.36□□□□□ -0.11
CTDSPL-202ENST00000310189 KCNQ3O43525 872 aa14.35□□□□□ -0.11
CTDSPL-202ENST00000310189 DDX58O95786 925 aaKnown RBP14.35□□□□□ -0.11
CTDSPL-202ENST00000310189 POTEAQ6S8J7 498 aa14.35□□□□□ -0.11
CTDSPL-202ENST00000310189 SLC4A10Q6U841 1118 aa14.35□□□□□ -0.11
CTDSPL-202ENST00000310189 ZBTB40Q9NUA8 1239 aa14.35□□□□□ -0.11
CTDSPL-202ENST00000310189 SLC39A6Q13433 755 aa14.34□□□□□ -0.11
CTDSPL-202ENST00000310189 MARCH10Q8NA82 808 aaPredicted RBP14.34□□□□□ -0.11
CTDSPL-202ENST00000310189 ZBTB7BO15156 539 aaPredicted RBP14.33□□□□□ -0.12
CTDSPL-202ENST00000310189 CHPF2Q9P2E5 772 aa14.33□□□□□ -0.12
CTDSPL-202ENST00000310189 KDM2BQ8NHM5 1336 aa14.33□□□□□ -0.12
CTDSPL-202ENST00000310189 HEG1Q9ULI3 1381 aa14.33□□□□□ -0.12
CTDSPL-202ENST00000310189 G2E3Q7L622 706 aa14.32□□□□□ -0.12
CTDSPL-202ENST00000310189 GNAI3P08754 354 aa14.31□□□□□ -0.12
CTDSPL-202ENST00000310189 HDAC1Q13547 482 aaPredicted RBP14.31□□□□□ -0.12
CTDSPL-202ENST00000310189 DDX21Q9NR30 783 aaKnown RBP eCLIP14.31□□□□□ -0.12
CTDSPL-202ENST00000310189 HDAC5Q9UQL6 1122 aa14.31□□□□□ -0.12
CTDSPL-202ENST00000310189 PCDHB15Q9Y5E8 787 aa14.31□□□□□ -0.12
CTDSPL-202ENST00000310189 RGS12O14924 1447 aa14.31□□□□□ -0.12
CTDSPL-202ENST00000310189 KRT27Q7Z3Y8 459 aa14.31□□□□□ -0.12
CTDSPL-202ENST00000310189 ZNF496Q96IT1 587 aaPredicted RBP14.31□□□□□ -0.12
CTDSPL-202ENST00000310189 TEX13AQ9BXU3 409 aaPredicted RBP14.31□□□□□ -0.12
CTDSPL-202ENST00000310189 PXDNLA1KZ92 1463 aa14.3□□□□□ -0.12
CTDSPL-202ENST00000310189 SYTL4Q96C24 671 aaPredicted RBP14.3□□□□□ -0.12
CTDSPL-202ENST00000310189 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
CTDSPL-202ENST00000310189 ERBB4Q15303 1308 aa14.29□□□□□ -0.12
CTDSPL-202ENST00000310189 IGHDP01880 384 aa14.29□□□□□ -0.12
CTDSPL-202ENST00000310189 DNAAF4Q8WXU2 420 aa14.29□□□□□ -0.12
CTDSPL-202ENST00000310189 SRCIN1Q9C0H9 1055 aa14.29□□□□□ -0.12
CTDSPL-202ENST00000310189 PHAXQ9H814 394 aaKnown RBP14.29□□□□□ -0.12
CTDSPL-202ENST00000310189 F6X3S4 739 aa14.28□□□□□ -0.12
CTDSPL-202ENST00000310189 HMMRO75330 724 aa14.28□□□□□ -0.12
CTDSPL-202ENST00000310189 FAM182BQ5T319 152 aa14.28□□□□□ -0.12
CTDSPL-202ENST00000310189 RPAP2Q8IXW5 612 aaPredicted RBP14.28□□□□□ -0.12
CTDSPL-202ENST00000310189 ACSBG1Q96GR2 724 aa14.28□□□□□ -0.12
CTDSPL-202ENST00000310189 TOGARAM1Q9Y4F4 1720 aa14.28□□□□□ -0.12
CTDSPL-202ENST00000310189 PRIM1P49642 420 aaKnown RBP14.27□□□□□ -0.12
CTDSPL-202ENST00000310189 NEXNQ0ZGT2 675 aa14.27□□□□□ -0.12
CTDSPL-202ENST00000310189 GCC1Q96CN9 775 aa14.27□□□□□ -0.12
CTDSPL-202ENST00000310189 DOT1LQ8TEK3 1739 aa14.27□□□□□ -0.13
CTDSPL-202ENST00000310189 PTCD1O75127 700 aaKnown RBP14.26□□□□□ -0.13
CTDSPL-202ENST00000310189 GNAI2P04899 355 aa14.26□□□□□ -0.13
CTDSPL-202ENST00000310189 KSR2Q6VAB6 950 aa14.26□□□□□ -0.13
CTDSPL-202ENST00000310189 RIC3Q7Z5B4 369 aa14.26□□□□□ -0.13
CTDSPL-202ENST00000310189 VSIG10Q8N0Z9 540 aa14.26□□□□□ -0.13
CTDSPL-202ENST00000310189 PI4KAP2A4QPH2 592 aa14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 BCL9O00512 1426 aa14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 STARD3NLO95772 234 aa14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 MYL6BP14649 208 aa14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 AIMP1Q12904 312 aaKnown RBP14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 PI4KAP1Q8N8J0 262 aa14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 PRAMEF22A3QJZ6 481 aa14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 UBTFL1P0CB47 393 aaPredicted RBP14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 FAM196AQ6ZSG2 479 aa14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 NPM2Q86SE8 214 aaKnown RBP14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 PIGBQ92521 554 aa14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 RBM42Q9BTD8 480 aaKnown RBP14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 USP16Q9Y5T5 823 aa14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 KAT6BQ8WYB5 2073 aa14.25□□□□□ -0.13
CTDSPL-202ENST00000310189 LAMB4A4D0S4 1761 aa14.24□□□□□ -0.13
CTDSPL-202ENST00000310189 BRWD3Q6RI45 1802 aa14.24□□□□□ -0.13
CTDSPL-202ENST00000310189 ALDH1L1O75891 902 aa14.24□□□□□ -0.13
CTDSPL-202ENST00000310189 ANXA1P04083 346 aa14.24□□□□□ -0.13
CTDSPL-202ENST00000310189 RGS3P49796 1198 aa14.24□□□□□ -0.13
CTDSPL-202ENST00000310189 C1orf115Q9H7X2 142 aa14.24□□□□□ -0.13
CTDSPL-202ENST00000310189 MAP3K2Q9Y2U5 619 aa14.24□□□□□ -0.13
CTDSPL-202ENST00000310189 PAPPAQ13219 1627 aa14.24□□□□□ -0.13
CTDSPL-202ENST00000310189 C5P01031 1676 aa14.23□□□□□ -0.13
CTDSPL-202ENST00000310189 ANKRD44Q8N8A2 993 aa14.23□□□□□ -0.13
CTDSPL-202ENST00000310189 MEIS3Q99687 375 aa14.23□□□□□ -0.13
CTDSPL-202ENST00000310189 UBR2Q8IWV8 1755 aa14.23□□□□□ -0.13
CTDSPL-202ENST00000310189 ATP10DQ9P241 1426 aa14.22□□□□□ -0.13
CTDSPL-202ENST00000310189 ITGB4P16144 1822 aa14.22□□□□□ -0.13
CTDSPL-202ENST00000310189 KCNQ2O43526 872 aa14.22□□□□□ -0.13
CTDSPL-202ENST00000310189 ANKRD13DQ6ZTN6 518 aa14.22□□□□□ -0.13
CTDSPL-202ENST00000310189 COPS6Q7L5N1 327 aa14.22□□□□□ -0.13
CTDSPL-202ENST00000310189 SMC5Q8IY18 1101 aa14.22□□□□□ -0.13
CTDSPL-202ENST00000310189 LINS1Q8NG48 757 aa14.22□□□□□ -0.13
CTDSPL-202ENST00000310189 XAGE3Q8WTP9 111 aa14.22□□□□□ -0.13
CTDSPL-202ENST00000310189 SMARCC1Q92922 1105 aaPredicted RBP14.22□□□□□ -0.13
CTDSPL-202ENST00000310189 C9orf78Q9NZ63 289 aaPredicted RBP14.22□□□□□ -0.13
CTDSPL-202ENST00000310189 PDZRN3Q9UPQ7 1066 aa14.22□□□□□ -0.13
CTDSPL-202ENST00000310189 N4BP2Q86UW6 1770 aaPredicted RBP14.21□□□□□ -0.13
CTDSPL-202ENST00000310189 PDIA6Q15084 440 aa14.21□□□□□ -0.13
CTDSPL-202ENST00000310189 PROSER3Q2NL68 480 aa14.21□□□□□ -0.13
CTDSPL-202ENST00000310189 TSHZ2Q9NRE2 1034 aa14.21□□□□□ -0.13
CTDSPL-202ENST00000310189 ATG3Q9NT62 314 aa14.21□□□□□ -0.13
CTDSPL-202ENST00000310189 ASAP1Q9ULH1 1129 aa14.21□□□□□ -0.13
CTDSPL-202ENST00000310189 KCPQ6ZWJ8 1503 aa14.21□□□□□ -0.13
CTDSPL-202ENST00000310189 NHSQ6T4R5 1651 aa14.21□□□□□ -0.14
CTDSPL-202ENST00000310189 BEND3Q5T5X7 828 aa14.2□□□□□ -0.14
CTDSPL-202ENST00000310189 ADCY9O60503 1353 aa14.2□□□□□ -0.14
CTDSPL-202ENST00000310189 CEP85Q6P2H3 762 aa14.19□□□□□ -0.14
CTDSPL-202ENST00000310189 PLBD2Q8NHP8 589 aa14.19□□□□□ -0.14
CTDSPL-202ENST00000310189 BCL11BQ9C0K0 894 aaPredicted RBP14.19□□□□□ -0.14
CTDSPL-202ENST00000310189 TRIM37O94972 964 aa14.18□□□□□ -0.14
CTDSPL-202ENST00000310189 ANKRD45Q5TZF3 282 aa14.18□□□□□ -0.14
CTDSPL-202ENST00000310189 NUCB1Q02818 461 aa14.18□□□□□ -0.14
CTDSPL-202ENST00000310189 KIF6Q6ZMV9 814 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms