RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 PTPRCP08575 1304 aa10.61□□□□□ -0.71
LCLAT1-201ENST00000309052 USP32Q8NFA0 1604 aa10.61□□□□□ -0.71
LCLAT1-201ENST00000309052 KCNQ2O43526 872 aa10.61□□□□□ -0.71
LCLAT1-201ENST00000309052 FOXD4L5Q5VV16 416 aaPredicted RBP10.61□□□□□ -0.71
LCLAT1-201ENST00000309052 FOXD4L4Q8WXT5 416 aaPredicted RBP10.61□□□□□ -0.71
LCLAT1-201ENST00000309052 G3BP1Q13283 466 aaKnown RBP eCLIP10.6□□□□□ -0.71
LCLAT1-201ENST00000309052 KDRP35968 1356 aa10.6□□□□□ -0.71
LCLAT1-201ENST00000309052 ANO2Q9NQ90 1003 aa10.6□□□□□ -0.71
LCLAT1-201ENST00000309052 NALCNQ8IZF0 1738 aa10.6□□□□□ -0.71
LCLAT1-201ENST00000309052 CRB1P82279 1406 aa10.6□□□□□ -0.71
LCLAT1-201ENST00000309052 PXDNQ92626 1479 aa10.6□□□□□ -0.71
LCLAT1-201ENST00000309052 PHF14O94880 888 aa10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 IFIT2P09913 472 aaKnown RBP10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 GORABQ5T7V8 394 aa10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 LRRCC1Q9C099 1032 aa10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 INTS3Q68E01 1043 aaKnown RBP10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 RPAP2Q8IXW5 612 aaPredicted RBP10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 GCC1Q96CN9 775 aa10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 FAM89AQ96GI7 184 aa10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 FOXD4L6Q3SYB3 417 aaPredicted RBP10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 KSR2Q6VAB6 950 aa10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 FOXD4L3Q6VB84 417 aaPredicted RBP10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 ANKRD44Q8N8A2 993 aa10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 PIGBQ92521 554 aa10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 ABCC4O15439 1325 aa10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 SOS2Q07890 1332 aaPredicted RBP10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 C22orf23Q9BZE7 217 aa10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 DDX21Q9NR30 783 aaKnown RBP eCLIP10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 HYPKQ9NX55 129 aa10.59□□□□□ -0.71
LCLAT1-201ENST00000309052 SYNE4Q8N205 404 aa10.58□□□□□ -0.72
LCLAT1-201ENST00000309052 PCDH11XQ9BZA7 1347 aa10.58□□□□□ -0.72
LCLAT1-201ENST00000309052 PCDH11YQ9BZA8 1340 aa10.58□□□□□ -0.72
LCLAT1-201ENST00000309052 ATP6V1AP38606 617 aa10.58□□□□□ -0.72
LCLAT1-201ENST00000309052 HDAC1Q13547 482 aaPredicted RBP10.58□□□□□ -0.72
LCLAT1-201ENST00000309052 SMC5Q8IY18 1101 aa10.58□□□□□ -0.72
LCLAT1-201ENST00000309052 CARD10Q9BWT7 1032 aa10.58□□□□□ -0.72
LCLAT1-201ENST00000309052 PIK3C2AO00443 1686 aa10.58□□□□□ -0.72
LCLAT1-201ENST00000309052 NUCB1Q02818 461 aa10.58□□□□□ -0.72
LCLAT1-201ENST00000309052 AACSQ86V21 672 aa10.58□□□□□ -0.72
LCLAT1-201ENST00000309052 ZNF594Q96JF6 807 aaPredicted RBP10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 DNAJC2Q99543 621 aaKnown RBP10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 LARP6Q9BRS8 491 aaKnown RBP10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 BICC1Q9H694 974 aaKnown RBP10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 BOLA2Q9H3K6 86 aa10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 WWC3Q9ULE0 1092 aa10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 CHD2O14647 1828 aaKnown RBP10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 CASC1Q6TDU7 716 aa10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 LMBR1LQ6UX01 489 aa10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 CLASRPQ8N2M8 674 aaKnown RBP10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 USP21Q9UK80 565 aa10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 PEAK1Q9H792 1746 aa10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 MEGF6O75095 1541 aa10.57□□□□□ -0.72
LCLAT1-201ENST00000309052 RTL1A6NKG5 1358 aa10.56□□□□□ -0.72
LCLAT1-201ENST00000309052 GRM8O00222 908 aa10.56□□□□□ -0.72
LCLAT1-201ENST00000309052 CHMP4AQ9BY43 222 aa10.56□□□□□ -0.72
LCLAT1-201ENST00000309052 NAP1L2Q9ULW6 460 aaPredicted RBP10.56□□□□□ -0.72
LCLAT1-201ENST00000309052 STARD3NLO95772 234 aa10.56□□□□□ -0.72
LCLAT1-201ENST00000309052 SUCLG2Q96I99 432 aa10.56□□□□□ -0.72
LCLAT1-201ENST00000309052 KIF6Q6ZMV9 814 aa10.56□□□□□ -0.72
LCLAT1-201ENST00000309052 BECN1Q14457 450 aa10.55□□□□□ -0.72
LCLAT1-201ENST00000309052 DDRGK1Q96HY6 314 aa10.55□□□□□ -0.72
LCLAT1-201ENST00000309052 SNRKQ9NRH2 765 aa10.55□□□□□ -0.72
LCLAT1-201ENST00000309052 PTF1AQ7RTS3 328 aa10.55□□□□□ -0.72
LCLAT1-201ENST00000309052 HELBQ8NG08 1087 aaPredicted RBP10.55□□□□□ -0.72
LCLAT1-201ENST00000309052 DCTPP1Q9H773 170 aa10.55□□□□□ -0.72
LCLAT1-201ENST00000309052 CWC27Q6UX04 472 aaKnown RBP10.55□□□□□ -0.72
LCLAT1-201ENST00000309052 XRN1Q8IZH2 1706 aaKnown RBP10.55□□□□□ -0.72
LCLAT1-201ENST00000309052 ZBTB1Q9Y2K1 713 aa10.55□□□□□ -0.72
LCLAT1-201ENST00000309052 HSPA1LP34931 641 aa10.55□□□□□ -0.72
LCLAT1-201ENST00000309052 TBC1D9Q6ZT07 1266 aa10.55□□□□□ -0.72
LCLAT1-201ENST00000309052 BEND3Q5T5X7 828 aa10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 EDC3Q96F86 508 aaKnown RBP10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 TRMT112Q9UI30 125 aaKnown RBP10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 EP400Q96L91 3159 aa10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 SDSP20132 328 aa10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 PLEKHM2Q8IWE5 1019 aa10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 LINS1Q8NG48 757 aa10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 MON2Q7Z3U7 1717 aa10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 MX1P20591 662 aa10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 ANP32EQ9BTT0 268 aa10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 SOS1Q07889 1333 aaPredicted RBP10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 ATP8B2P98198 1209 aa10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 RHPN1Q8TCX5 695 aa10.54□□□□□ -0.72
LCLAT1-201ENST00000309052 NBPF26B4DH59 902 aa10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 HCLS1P14317 486 aaPredicted RBP10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 NBPF14Q5TI25 921 aa10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 NBPF10Q6P3W6 841 aaKnown RBP10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 NBPF15Q8N660 670 aa10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 EPHA10Q5JZY3 1008 aa10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 AAMPQ13685 434 aa10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 HSCBQ8IWL3 235 aa10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 STK11IPQ8N1F8 1099 aa10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 UPF3BQ9BZI7 483 aaKnown RBP10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 TIMM10P62072 90 aa10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 IQSEC3Q9UPP2 1182 aaPredicted RBP10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 KNDC1Q76NI1 1749 aa10.53□□□□□ -0.72
LCLAT1-201ENST00000309052 FMN2Q9NZ56 1722 aa10.52□□□□□ -0.72
LCLAT1-201ENST00000309052 IGKV5-2P06315 115 aa10.52□□□□□ -0.73
LCLAT1-201ENST00000309052 KIAA1211Q6ZU35 1233 aa10.52□□□□□ -0.73
LCLAT1-201ENST00000309052 CDC45O75419 566 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms