RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 PAF1Q8N7H5 531 aa21.7■■□□□ 1.06
UBXN2A-201ENST00000309033 GRIN2AQ12879 1464 aa21.7■■□□□ 1.06
UBXN2A-201ENST00000309033 ATP5J2-PTCD1G3V325 749 aa21.7■■□□□ 1.06
UBXN2A-201ENST00000309033 PPFIA3O75145 1194 aa21.7■■□□□ 1.06
UBXN2A-201ENST00000309033 CKAP2LQ8IYA6 745 aa21.7■■□□□ 1.06
UBXN2A-201ENST00000309033 SH2B1Q9NRF2 756 aaPredicted RBP21.7■■□□□ 1.06
UBXN2A-201ENST00000309033 RPRD2Q5VT52 1461 aaKnown RBP21.7■■□□□ 1.06
UBXN2A-201ENST00000309033 ZNF213O14771 459 aa21.69■■□□□ 1.06
UBXN2A-201ENST00000309033 KRI1Q8N9T8 703 aaKnown RBP21.69■■□□□ 1.06
UBXN2A-201ENST00000309033 SEC63Q9UGP8 760 aaKnown RBP21.69■■□□□ 1.06
UBXN2A-201ENST00000309033 LIMCH1Q9UPQ0 1083 aa21.69■■□□□ 1.06
UBXN2A-201ENST00000309033 CCDC66A2RUB6 948 aa21.68■■□□□ 1.06
UBXN2A-201ENST00000309033 MAP3K12Q12852 859 aa21.68■■□□□ 1.06
UBXN2A-201ENST00000309033 DZIP1Q86YF9 867 aaKnown RBP21.68■■□□□ 1.06
UBXN2A-201ENST00000309033 SLC12A7Q9Y666 1083 aa21.68■■□□□ 1.06
UBXN2A-201ENST00000309033 GOLIM4O00461 696 aa21.68■■□□□ 1.06
UBXN2A-201ENST00000309033 ERLIN1O75477 346 aa21.68■■□□□ 1.06
UBXN2A-201ENST00000309033 ANXA1P04083 346 aa21.68■■□□□ 1.06
UBXN2A-201ENST00000309033 TXLNBQ8N3L3 684 aa21.68■■□□□ 1.06
UBXN2A-201ENST00000309033 SLC5A1P13866 664 aa21.67■■□□□ 1.06
UBXN2A-201ENST00000309033 ARHGAP29Q52LW3 1261 aa21.67■■□□□ 1.06
UBXN2A-201ENST00000309033 CCDC144CPQ8IYA2 1237 aa21.67■■□□□ 1.06
UBXN2A-201ENST00000309033 SCAND2PQ9GZW5 306 aaPredicted RBP21.67■■□□□ 1.06
UBXN2A-201ENST00000309033 GOLGA8BA8MQT2 603 aa21.67■■□□□ 1.06
UBXN2A-201ENST00000309033 SNRKQ9NRH2 765 aa21.67■■□□□ 1.06
UBXN2A-201ENST00000309033 DNAJC5BQ9UF47 199 aa21.67■■□□□ 1.06
UBXN2A-201ENST00000309033 ANKRD18BA2A2Z9 1011 aa21.67■■□□□ 1.06
UBXN2A-201ENST00000309033 PDIA4P13667 645 aaKnown RBP21.67■■□□□ 1.06
UBXN2A-201ENST00000309033 GJB2P29033 226 aa21.67■■□□□ 1.06
UBXN2A-201ENST00000309033 ZSCAN30Q86W11 494 aa21.67■■□□□ 1.06
UBXN2A-201ENST00000309033 C14orf93Q9H972 538 aaKnown RBP21.67■■□□□ 1.06
UBXN2A-201ENST00000309033 RAB11FIP4Q86YS3 637 aa21.66■■□□□ 1.06
UBXN2A-201ENST00000309033 CRACR2BQ8N4Y2 399 aaPredicted RBP21.66■■□□□ 1.06
UBXN2A-201ENST00000309033 CCDC191Q8NCU4 936 aa21.66■■□□□ 1.06
UBXN2A-201ENST00000309033 EVI5LQ96CN4 794 aa21.66■■□□□ 1.06
UBXN2A-201ENST00000309033 PPP1R42Q7Z4L9 355 aa21.66■■□□□ 1.06
UBXN2A-201ENST00000309033 ANO10Q9NW15 660 aa21.66■■□□□ 1.06
UBXN2A-201ENST00000309033 TFIP11Q9UBB9 837 aaKnown RBP21.65■■□□□ 1.06
UBXN2A-201ENST00000309033 GOLGA8AA7E2F4 631 aa21.65■■□□□ 1.06
UBXN2A-201ENST00000309033 PI4KAP2A4QPH2 592 aa21.65■■□□□ 1.06
UBXN2A-201ENST00000309033 HMGB1P09429 215 aaKnown RBP21.65■■□□□ 1.06
UBXN2A-201ENST00000309033 PI4KAP1Q8N8J0 262 aa21.65■■□□□ 1.06
UBXN2A-201ENST00000309033 IFIT3O14879 490 aaKnown RBP21.65■■□□□ 1.06
UBXN2A-201ENST00000309033 ACEP12821 1306 aa21.65■■□□□ 1.06
UBXN2A-201ENST00000309033 ECHDC1Q9NTX5 307 aa21.64■■□□□ 1.06
UBXN2A-201ENST00000309033 SSRP1Q08945 709 aaKnown RBP21.64■■□□□ 1.06
UBXN2A-201ENST00000309033 ANKRD62A6NC57 917 aa21.64■■□□□ 1.05
UBXN2A-201ENST00000309033 TAX1BP1Q86VP1 789 aa21.64■■□□□ 1.05
UBXN2A-201ENST00000309033 CTCFLQ8NI51 663 aaPredicted RBP21.64■■□□□ 1.05
UBXN2A-201ENST00000309033 SFPQP23246 707 aaKnown RBP eCLIP21.64■■□□□ 1.05
UBXN2A-201ENST00000309033 HAND2P61296 217 aa21.64■■□□□ 1.05
UBXN2A-201ENST00000309033 SLC4A8Q2Y0W8 1093 aa21.64■■□□□ 1.05
UBXN2A-201ENST00000309033 PLEKHH1Q9ULM0 1364 aa21.64■■□□□ 1.05
UBXN2A-201ENST00000309033 KRT28Q7Z3Y7 464 aa21.63■■□□□ 1.05
UBXN2A-201ENST00000309033 TTC21BQ7Z4L5 1316 aa21.63■■□□□ 1.05
UBXN2A-201ENST00000309033 USP25Q9UHP3 1055 aa21.63■■□□□ 1.05
UBXN2A-201ENST00000309033 TTC22Q5TAA0 569 aa21.63■■□□□ 1.05
UBXN2A-201ENST00000309033 CCDC102AQ96A19 550 aa21.63■■□□□ 1.05
UBXN2A-201ENST00000309033 ZNF287Q9HBT7 754 aa21.63■■□□□ 1.05
UBXN2A-201ENST00000309033 TMOD2Q9NZR1 351 aa21.63■■□□□ 1.05
UBXN2A-201ENST00000309033 DHX37Q8IY37 1157 aaKnown RBP21.63■■□□□ 1.05
UBXN2A-201ENST00000309033 TMX1Q9H3N1 280 aa21.63■■□□□ 1.05
UBXN2A-201ENST00000309033 CLIP2Q9UDT6 1046 aa21.63■■□□□ 1.05
UBXN2A-201ENST00000309033 UBE3BQ7Z3V4 1068 aa21.63■■□□□ 1.05
UBXN2A-201ENST00000309033 SEPT7Q16181 437 aaKnown RBP21.62■■□□□ 1.05
UBXN2A-201ENST00000309033 NSD2O96028 1365 aa21.62■■□□□ 1.05
UBXN2A-201ENST00000309033 EIF3JO75822 258 aaKnown RBP21.62■■□□□ 1.05
UBXN2A-201ENST00000309033 CCDC196A0A1B0GTZ2 297 aa21.62■■□□□ 1.05
UBXN2A-201ENST00000309033 IBSPP21815 317 aaPredicted RBP21.62■■□□□ 1.05
UBXN2A-201ENST00000309033 RBM27Q9P2N5 1060 aaKnown RBP21.62■■□□□ 1.05
UBXN2A-201ENST00000309033 MAP3K1Q13233 1512 aa21.62■■□□□ 1.05
UBXN2A-201ENST00000309033 ENOX2Q16206 610 aaKnown RBP21.62■■□□□ 1.05
UBXN2A-201ENST00000309033 ZNF219Q9P2Y4 722 aaPredicted RBP21.62■■□□□ 1.05
UBXN2A-201ENST00000309033 SSR1P43307 286 aaKnown RBP21.62■■□□□ 1.05
UBXN2A-201ENST00000309033 ZNF444Q8N0Y2 327 aaPredicted RBP21.62■■□□□ 1.05
UBXN2A-201ENST00000309033 ZNF397Q8NF99 534 aaPredicted RBP21.62■■□□□ 1.05
UBXN2A-201ENST00000309033 FANCAO15360 1455 aa21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 BMP2KLQ5H9B9 411 aa21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 CCDC96Q2M329 555 aa21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 FSIP1Q8NA03 581 aa21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 UBA5Q9GZZ9 404 aa21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 BIN1O00499 593 aa21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 PTPN14Q15678 1187 aa21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 HSP90AB3PQ58FF7 597 aa21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 IQCEQ6IPM2 695 aa21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 IQCA1Q86XH1 822 aa21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 TAF4BQ92750 862 aa21.61■■□□□ 1.05
UBXN2A-201ENST00000309033 CHRNA2Q15822 529 aa21.6■■□□□ 1.05
UBXN2A-201ENST00000309033 CPLX3Q8WVH0 158 aa21.6■■□□□ 1.05
UBXN2A-201ENST00000309033 UBXN4Q92575 508 aa21.6■■□□□ 1.05
UBXN2A-201ENST00000309033 NLRP5P59047 1200 aa21.6■■□□□ 1.05
UBXN2A-201ENST00000309033 ANKRD24Q8TF21 1146 aa21.6■■□□□ 1.05
UBXN2A-201ENST00000309033 PIK3R4Q99570 1358 aa21.59■■□□□ 1.05
UBXN2A-201ENST00000309033 STX6O43752 255 aa21.59■■□□□ 1.05
UBXN2A-201ENST00000309033 CNNM3Q8NE01 707 aa21.59■■□□□ 1.05
UBXN2A-201ENST00000309033 CWC25Q9NXE8 425 aaPredicted RBP21.59■■□□□ 1.05
UBXN2A-201ENST00000309033 TOP1P11387 765 aaKnown RBP21.59■■□□□ 1.05
UBXN2A-201ENST00000309033 CCDC148Q8NFR7 591 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms