RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 RAB11FIP3O75154 756 aa12.87□□□□□ -0.35
MUC4-201ENST00000308466 PIP4K2AP48426 406 aaPredicted RBP12.87□□□□□ -0.35
MUC4-201ENST00000308466 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
MUC4-201ENST00000308466 BOLA2Q9H3K6 86 aa12.86□□□□□ -0.35
MUC4-201ENST00000308466 PA2G4Q9UQ80 394 aaKnown RBP12.86□□□□□ -0.35
MUC4-201ENST00000308466 MAP3K5Q99683 1374 aa12.86□□□□□ -0.35
MUC4-201ENST00000308466 KCNQ3O43525 872 aa12.86□□□□□ -0.35
MUC4-201ENST00000308466 GCP02774 474 aa12.86□□□□□ -0.35
MUC4-201ENST00000308466 JAKMIP1Q96N16 626 aaKnown RBP12.86□□□□□ -0.35
MUC4-201ENST00000308466 ATP6V1DQ9Y5K8 247 aa12.86□□□□□ -0.35
MUC4-201ENST00000308466 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.86□□□□□ -0.35
MUC4-201ENST00000308466 CHRNA2Q15822 529 aa12.86□□□□□ -0.35
MUC4-201ENST00000308466 CWF19L2Q2TBE0 894 aaKnown RBP12.86□□□□□ -0.35
MUC4-201ENST00000308466 GLRX3O76003 335 aaKnown RBP12.85□□□□□ -0.35
MUC4-201ENST00000308466 FOSBP53539 338 aa12.85□□□□□ -0.35
MUC4-201ENST00000308466 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
MUC4-201ENST00000308466 KIAA0232Q92628 1395 aa12.85□□□□□ -0.35
MUC4-201ENST00000308466 PHF14O94880 888 aa12.85□□□□□ -0.35
MUC4-201ENST00000308466 NBPF7P0C2Y1 421 aaPredicted RBP12.85□□□□□ -0.35
MUC4-201ENST00000308466 CASTP20810 708 aaKnown RBP12.85□□□□□ -0.35
MUC4-201ENST00000308466 ZRSR1Q15695 479 aaKnown RBP12.85□□□□□ -0.35
MUC4-201ENST00000308466 IP6K1Q92551 441 aa12.85□□□□□ -0.35
MUC4-201ENST00000308466 USP6P35125 1406 aa12.85□□□□□ -0.35
MUC4-201ENST00000308466 PPLO60437 1756 aa12.85□□□□□ -0.35
MUC4-201ENST00000308466 SYCE3A1L190 88 aa12.85□□□□□ -0.35
MUC4-201ENST00000308466 CABP4P57796 275 aa12.85□□□□□ -0.35
MUC4-201ENST00000308466 RNF20Q5VTR2 975 aa12.85□□□□□ -0.35
MUC4-201ENST00000308466 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
MUC4-201ENST00000308466 ERC1Q8IUD2 1116 aa12.85□□□□□ -0.35
MUC4-201ENST00000308466 DRC7Q8IY82 874 aa12.85□□□□□ -0.35
MUC4-201ENST00000308466 DTNBO60941 627 aa12.84□□□□□ -0.35
MUC4-201ENST00000308466 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.84□□□□□ -0.35
MUC4-201ENST00000308466 CDK12Q9NYV4 1490 aaPredicted RBP12.84□□□□□ -0.35
MUC4-201ENST00000308466 STK3Q13188 491 aa12.84□□□□□ -0.35
MUC4-201ENST00000308466 MYD88Q99836 296 aa12.84□□□□□ -0.35
MUC4-201ENST00000308466 USP44Q9H0E7 712 aa12.84□□□□□ -0.35
MUC4-201ENST00000308466 CHMLP26374 656 aa12.84□□□□□ -0.35
MUC4-201ENST00000308466 CABLES1Q8TDN4 633 aa12.84□□□□□ -0.35
MUC4-201ENST00000308466 STRN4Q9NRL3 753 aa12.84□□□□□ -0.35
MUC4-201ENST00000308466 CYP46A1Q9Y6A2 500 aa12.84□□□□□ -0.35
MUC4-201ENST00000308466 MBD3O95983 291 aa12.83□□□□□ -0.36
MUC4-201ENST00000308466 H3BQV1 296 aa12.83□□□□□ -0.36
MUC4-201ENST00000308466 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
MUC4-201ENST00000308466 IFFO2Q5TF58 517 aa12.83□□□□□ -0.36
MUC4-201ENST00000308466 CPSF1Q10570 1443 aaKnown RBP12.83□□□□□ -0.36
MUC4-201ENST00000308466 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
MUC4-201ENST00000308466 SYTL4Q96C24 671 aaPredicted RBP12.83□□□□□ -0.36
MUC4-201ENST00000308466 ISY1Q9ULR0 285 aaKnown RBP12.83□□□□□ -0.36
MUC4-201ENST00000308466 NEURL4Q96JN8 1562 aa12.83□□□□□ -0.36
MUC4-201ENST00000308466 MED14O60244 1454 aa12.82□□□□□ -0.36
MUC4-201ENST00000308466 ZC3H13Q5T200 1668 aaKnown RBP12.82□□□□□ -0.36
MUC4-201ENST00000308466 ATP5J2-PTCD1G3V325 749 aa12.82□□□□□ -0.36
MUC4-201ENST00000308466 AKAP4Q5JQC9 854 aa12.82□□□□□ -0.36
MUC4-201ENST00000308466 CCDC83Q8IWF9 413 aa12.82□□□□□ -0.36
MUC4-201ENST00000308466 WDR33Q9C0J8 1336 aaKnown RBP12.82□□□□□ -0.36
MUC4-201ENST00000308466 KIAA2012Q0VF49 1180 aa12.82□□□□□ -0.36
MUC4-201ENST00000308466 CSPP1Q1MSJ5 1256 aa12.82□□□□□ -0.36
MUC4-201ENST00000308466 ZNF771Q7L3S4 317 aaPredicted RBP12.82□□□□□ -0.36
MUC4-201ENST00000308466 CHAMP1Q96JM3 812 aa12.82□□□□□ -0.36
MUC4-201ENST00000308466 CD163L1Q9NR16 1453 aa12.82□□□□□ -0.36
MUC4-201ENST00000308466 PKP1Q13835 747 aa12.82□□□□□ -0.36
MUC4-201ENST00000308466 KLHL40Q2TBA0 621 aa12.82□□□□□ -0.36
MUC4-201ENST00000308466 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
MUC4-201ENST00000308466 ECHDC1Q9NTX5 307 aa12.82□□□□□ -0.36
MUC4-201ENST00000308466 PDRG1Q9NUG6 133 aa12.81□□□□□ -0.36
MUC4-201ENST00000308466 PTCH1Q13635 1447 aa12.81□□□□□ -0.36
MUC4-201ENST00000308466 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
MUC4-201ENST00000308466 PLEKHG1Q9ULL1 1385 aa12.81□□□□□ -0.36
MUC4-201ENST00000308466 SOS1Q07889 1333 aaPredicted RBP12.81□□□□□ -0.36
MUC4-201ENST00000308466 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
MUC4-201ENST00000308466 FERMT3Q86UX7 667 aa12.81□□□□□ -0.36
MUC4-201ENST00000308466 CCDC85AQ96PX6 553 aaPredicted RBP12.81□□□□□ -0.36
MUC4-201ENST00000308466 IGSF1Q8N6C5 1336 aa12.81□□□□□ -0.36
MUC4-201ENST00000308466 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
MUC4-201ENST00000308466 HYPKQ9NX55 129 aa12.81□□□□□ -0.36
MUC4-201ENST00000308466 CPS1P31327 1500 aa12.81□□□□□ -0.36
MUC4-201ENST00000308466 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
MUC4-201ENST00000308466 CPA1P15085 419 aa12.8□□□□□ -0.36
MUC4-201ENST00000308466 CCDC173Q0VFZ6 552 aa12.8□□□□□ -0.36
MUC4-201ENST00000308466 COPS6Q7L5N1 327 aa12.8□□□□□ -0.36
MUC4-201ENST00000308466 IGSF3O75054 1194 aa12.8□□□□□ -0.36
MUC4-201ENST00000308466 TCEANC2Q96MN5 208 aa12.8□□□□□ -0.36
MUC4-201ENST00000308466 PSMA5P28066 241 aa12.79□□□□□ -0.36
MUC4-201ENST00000308466 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
MUC4-201ENST00000308466 CBX1P83916 185 aa12.79□□□□□ -0.36
MUC4-201ENST00000308466 KSR2Q6VAB6 950 aa12.79□□□□□ -0.36
MUC4-201ENST00000308466 CGNQ9P2M7 1197 aaKnown RBP12.79□□□□□ -0.36
MUC4-201ENST00000308466 MYO3AQ8NEV4 1616 aa12.79□□□□□ -0.36
MUC4-201ENST00000308466 UQCRHLA0A096LP55 91 aa12.79□□□□□ -0.36
MUC4-201ENST00000308466 RNMTO43148 476 aaKnown RBP12.79□□□□□ -0.36
MUC4-201ENST00000308466 UQCRHP07919 91 aa12.79□□□□□ -0.36
MUC4-201ENST00000308466 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.79□□□□□ -0.36
MUC4-201ENST00000308466 UBE3BQ7Z3V4 1068 aa12.79□□□□□ -0.36
MUC4-201ENST00000308466 XAGE3Q8WTP9 111 aa12.79□□□□□ -0.36
MUC4-201ENST00000308466 LARP1BQ659C4 914 aaKnown RBP12.79□□□□□ -0.36
MUC4-201ENST00000308466 BLOC1S2Q6QNY1 142 aa12.79□□□□□ -0.36
MUC4-201ENST00000308466 UNC5CLQ8IV45 518 aa12.79□□□□□ -0.36
MUC4-201ENST00000308466 DDX17Q92841 729 aaKnown RBP12.79□□□□□ -0.36
MUC4-201ENST00000308466 MAP7D2Q96T17 732 aa12.79□□□□□ -0.36
MUC4-201ENST00000308466 PALD1Q9ULE6 856 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms