RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 OLFM4Q6UX06 510 aa15.7■□□□□ 0.1
DDX54-201ENST00000306014 ERVK-7P63135 1459 aa15.7■□□□□ 0.1
DDX54-201ENST00000306014 MPRIPQ6WCQ1 1025 aa15.7■□□□□ 0.1
DDX54-201ENST00000306014 NECAB1Q8N987 351 aa15.7■□□□□ 0.1
DDX54-201ENST00000306014 ATP8B2P98198 1209 aa15.69■□□□□ 0.1
DDX54-201ENST00000306014 SAFBQ15424 915 aaKnown RBP eCLIP15.69■□□□□ 0.1
DDX54-201ENST00000306014 GAS2L3Q86XJ1 694 aa15.69■□□□□ 0.1
DDX54-201ENST00000306014 PRDM15P57071 1507 aaPredicted RBP15.69■□□□□ 0.1
DDX54-201ENST00000306014 CFAP65Q6ZU64 1925 aaKnown RBP15.69■□□□□ 0.1
DDX54-201ENST00000306014 DYNC1I1O14576 645 aa15.69■□□□□ 0.1
DDX54-201ENST00000306014 TEX35Q5T0J7 233 aa15.69■□□□□ 0.1
DDX54-201ENST00000306014 RIMS2Q9UQ26 1411 aa15.69■□□□□ 0.1
DDX54-201ENST00000306014 TCEANC2Q96MN5 208 aa15.69■□□□□ 0.1
DDX54-201ENST00000306014 C16orf45Q96MC5 204 aaPredicted RBP15.68■□□□□ 0.1
DDX54-201ENST00000306014 KDM5AP29375 1690 aaKnown RBP15.68■□□□□ 0.1
DDX54-201ENST00000306014 G2E3Q7L622 706 aa15.68■□□□□ 0.1
DDX54-201ENST00000306014 CEP57L1Q8IYX8 460 aa15.68■□□□□ 0.1
DDX54-201ENST00000306014 MSH6P52701 1360 aa15.68■□□□□ 0.1
DDX54-201ENST00000306014 DHX16O60231 1041 aaKnown RBP15.68■□□□□ 0.1
DDX54-201ENST00000306014 PDIA4P13667 645 aaKnown RBP15.68■□□□□ 0.1
DDX54-201ENST00000306014 TSR1Q2NL82 804 aaKnown RBP15.68■□□□□ 0.1
DDX54-201ENST00000306014 MTHFSDQ2M296 383 aaKnown RBP15.68■□□□□ 0.1
DDX54-201ENST00000306014 UVSSAQ2YD98 709 aa15.68■□□□□ 0.1
DDX54-201ENST00000306014 GPS2Q13227 327 aa15.67■□□□□ 0.1
DDX54-201ENST00000306014 CFAP74Q9C0B2 1584 aa15.67■□□□□ 0.1
DDX54-201ENST00000306014 ZFYVE9O95405 1425 aa15.67■□□□□ 0.1
DDX54-201ENST00000306014 IL13P35225 146 aa15.67■□□□□ 0.1
DDX54-201ENST00000306014 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
DDX54-201ENST00000306014 GSPT1P15170 499 aaKnown RBP15.67■□□□□ 0.1
DDX54-201ENST00000306014 CHMLP26374 656 aa15.67■□□□□ 0.1
DDX54-201ENST00000306014 FKBP4Q02790 459 aaKnown RBP eCLIP15.67■□□□□ 0.1
DDX54-201ENST00000306014 NOLC1Q14978 699 aaKnown RBP eCLIP15.67■□□□□ 0.1
DDX54-201ENST00000306014 HS1BP3Q53T59 392 aa15.67■□□□□ 0.1
DDX54-201ENST00000306014 ZFYVE16Q7Z3T8 1539 aa15.67■□□□□ 0.1
DDX54-201ENST00000306014 SYNMO15061 1565 aa15.66■□□□□ 0.1
DDX54-201ENST00000306014 FSD2A1L4K1 749 aa15.66■□□□□ 0.1
DDX54-201ENST00000306014 SERPINC1P01008 464 aa15.66■□□□□ 0.1
DDX54-201ENST00000306014 ABCC1P33527 1531 aa15.66■□□□□ 0.1
DDX54-201ENST00000306014 GTF2E1P29083 439 aaPredicted RBP15.66■□□□□ 0.1
DDX54-201ENST00000306014 DNM1Q05193 864 aaKnown RBP15.66■□□□□ 0.1
DDX54-201ENST00000306014 DNAJC5Q9H3Z4 198 aa15.66■□□□□ 0.1
DDX54-201ENST00000306014 DBF4Q9UBU7 674 aaPredicted RBP15.66■□□□□ 0.1
DDX54-201ENST00000306014 PIK3R4Q99570 1358 aa15.66■□□□□ 0.1
DDX54-201ENST00000306014 PREX2Q70Z35 1606 aa15.66■□□□□ 0.1
DDX54-201ENST00000306014 CD2BP2O95400 341 aaKnown RBP15.66■□□□□ 0.1
DDX54-201ENST00000306014 GUCY1B3Q02153 619 aa15.66■□□□□ 0.1
DDX54-201ENST00000306014 EVI5LQ96CN4 794 aa15.66■□□□□ 0.1
DDX54-201ENST00000306014 LMBRD1Q9NUN5 540 aa15.66■□□□□ 0.1
DDX54-201ENST00000306014 FAM177A1Q8N128 213 aaPredicted RBP15.65■□□□□ 0.1
DDX54-201ENST00000306014 STK11IPQ8N1F8 1099 aa15.65■□□□□ 0.1
DDX54-201ENST00000306014 CLIP2Q9UDT6 1046 aa15.65■□□□□ 0.1
DDX54-201ENST00000306014 ERICH2A1L162 156 aa15.65■□□□□ 0.1
DDX54-201ENST00000306014 NPATQ14207 1427 aa15.65■□□□□ 0.1
DDX54-201ENST00000306014 A0A0U1RQG5 324 aaPredicted RBP15.65■□□□□ 0.1
DDX54-201ENST00000306014 PPFIA3O75145 1194 aa15.65■□□□□ 0.1
DDX54-201ENST00000306014 PKP1Q13835 747 aa15.65■□□□□ 0.1
DDX54-201ENST00000306014 PLEKHF1Q96S99 279 aa15.65■□□□□ 0.1
DDX54-201ENST00000306014 MAP3K2Q9Y2U5 619 aa15.65■□□□□ 0.1
DDX54-201ENST00000306014 SBNO2Q9Y2G9 1366 aa15.65■□□□□ 0.1
DDX54-201ENST00000306014 YTHDC2Q9H6S0 1430 aaKnown RBP15.65■□□□□ 0.1
DDX54-201ENST00000306014 TATP17735 454 aaPredicted RBP15.64■□□□□ 0.09
DDX54-201ENST00000306014 ZNF445P59923 1031 aa15.64■□□□□ 0.09
DDX54-201ENST00000306014 MLH3Q9UHC1 1453 aa15.64■□□□□ 0.09
DDX54-201ENST00000306014 TSPOAP1O95153 1857 aa15.64■□□□□ 0.09
DDX54-201ENST00000306014 TNNT1P13805 278 aa15.64■□□□□ 0.09
DDX54-201ENST00000306014 ZNF165P49910 485 aa15.64■□□□□ 0.09
DDX54-201ENST00000306014 F13A1P00488 732 aa15.64■□□□□ 0.09
DDX54-201ENST00000306014 AK2P54819 239 aa15.64■□□□□ 0.09
DDX54-201ENST00000306014 SYTL4Q96C24 671 aaPredicted RBP15.64■□□□□ 0.09
DDX54-201ENST00000306014 NOL7Q9UMY1 257 aaKnown RBP15.64■□□□□ 0.09
DDX54-201ENST00000306014 CCDC158Q5M9N0 1113 aa15.64■□□□□ 0.09
DDX54-201ENST00000306014 INTS4Q96HW7 963 aaKnown RBP15.64■□□□□ 0.09
DDX54-201ENST00000306014 CHPF2Q9P2E5 772 aa15.63■□□□□ 0.09
DDX54-201ENST00000306014 PHF8Q9UPP1 1060 aa15.63■□□□□ 0.09
DDX54-201ENST00000306014 PTPN14Q15678 1187 aa15.63■□□□□ 0.09
DDX54-201ENST00000306014 TTC39AQ5SRH9 613 aa15.63■□□□□ 0.09
DDX54-201ENST00000306014 ANKRD20A12PQ8NF67 263 aa15.63■□□□□ 0.09
DDX54-201ENST00000306014 CPA1P15085 419 aa15.63■□□□□ 0.09
DDX54-201ENST00000306014 PPP4R3BQ5MIZ7 849 aa15.63■□□□□ 0.09
DDX54-201ENST00000306014 TTLL5Q6EMB2 1281 aa15.63■□□□□ 0.09
DDX54-201ENST00000306014 PRIMPOLQ96LW4 560 aa15.63■□□□□ 0.09
DDX54-201ENST00000306014 DDX19AQ9NUU7 478 aaKnown RBP15.63■□□□□ 0.09
DDX54-201ENST00000306014 CHAMP1Q96JM3 812 aa15.62■□□□□ 0.09
DDX54-201ENST00000306014 MYD88Q99836 296 aa15.62■□□□□ 0.09
DDX54-201ENST00000306014 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.62■□□□□ 0.09
DDX54-201ENST00000306014 ZC3H6P61129 1189 aaKnown RBP15.62■□□□□ 0.09
DDX54-201ENST00000306014 LARP1Q6PKG0 1096 aaKnown RBP15.62■□□□□ 0.09
DDX54-201ENST00000306014 TRMT1Q9NXH9 659 aaKnown RBP15.62■□□□□ 0.09
DDX54-201ENST00000306014 SPDYE4A6NLX3 237 aa15.62■□□□□ 0.09
DDX54-201ENST00000306014 DTNBO60941 627 aa15.62■□□□□ 0.09
DDX54-201ENST00000306014 HSPA2P54652 639 aa15.62■□□□□ 0.09
DDX54-201ENST00000306014 RRP12Q5JTH9 1297 aaKnown RBP15.62■□□□□ 0.09
DDX54-201ENST00000306014 CCDC85AQ96PX6 553 aaPredicted RBP15.61■□□□□ 0.09
DDX54-201ENST00000306014 TMEM63CQ9P1W3 806 aa15.61■□□□□ 0.09
DDX54-201ENST00000306014 CCT2P78371 535 aaKnown RBP15.61■□□□□ 0.09
DDX54-201ENST00000306014 JMYQ8N9B5 988 aa15.61■□□□□ 0.09
DDX54-201ENST00000306014 UGGT1Q9NYU2 1555 aa15.61■□□□□ 0.09
DDX54-201ENST00000306014 IPO7O95373 1038 aaKnown RBP15.61■□□□□ 0.09
DDX54-201ENST00000306014 CABP4P57796 275 aa15.61■□□□□ 0.09
DDX54-201ENST00000306014 PCMTD1Q96MG8 357 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms