RNA–Protein interactions for RNA: ENST00000303460.4

HOXC10-201, Transcript of homeobox C10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC10, Length 1,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-201ENST00000303460 ITGB4P16144 1822 aa23.51■■□□□ 1.35
HOXC10-201ENST00000303460 FNBP4Q8N3X1 1017 aaPredicted RBP23.51■■□□□ 1.35
HOXC10-201ENST00000303460 KCPQ6ZWJ8 1503 aa23.5■■□□□ 1.35
HOXC10-201ENST00000303460 CHMP4BQ9H444 224 aaKnown RBP23.5■■□□□ 1.35
HOXC10-201ENST00000303460 RWDD1Q9H446 243 aaPredicted RBP23.5■■□□□ 1.35
HOXC10-201ENST00000303460 C1orf115Q9H7X2 142 aa23.5■■□□□ 1.35
HOXC10-201ENST00000303460 ZBTB47Q9UFB7 747 aaPredicted RBP23.5■■□□□ 1.35
HOXC10-201ENST00000303460 SNRPA1P09661 255 aaKnown RBP23.49■■□□□ 1.35
HOXC10-201ENST00000303460 PDIA6Q15084 440 aa23.49■■□□□ 1.35
HOXC10-201ENST00000303460 BARGINQ6ZT62 677 aa23.49■■□□□ 1.35
HOXC10-201ENST00000303460 N4BP2Q86UW6 1770 aaPredicted RBP23.49■■□□□ 1.35
HOXC10-201ENST00000303460 TMOD3Q9NYL9 352 aa23.49■■□□□ 1.35
HOXC10-201ENST00000303460 USP16Q9Y5T5 823 aa23.49■■□□□ 1.35
HOXC10-201ENST00000303460 CCT4P50991 539 aaKnown RBP23.48■■□□□ 1.35
HOXC10-201ENST00000303460 HDAC1Q13547 482 aaPredicted RBP23.48■■□□□ 1.35
HOXC10-201ENST00000303460 VPS72Q15906 364 aa23.48■■□□□ 1.35
HOXC10-201ENST00000303460 DDB1Q16531 1140 aa23.48■■□□□ 1.35
HOXC10-201ENST00000303460 FAM161AQ3B820 660 aa23.47■■□□□ 1.35
HOXC10-201ENST00000303460 LAMB4A4D0S4 1761 aa23.47■■□□□ 1.35
HOXC10-201ENST00000303460 PIGBQ92521 554 aa23.47■■□□□ 1.35
HOXC10-201ENST00000303460 DDX21Q9NR30 783 aaKnown RBP eCLIP23.47■■□□□ 1.35
HOXC10-201ENST00000303460 PXDNLA1KZ92 1463 aa23.46■■□□□ 1.35
HOXC10-201ENST00000303460 MEIS3Q99687 375 aa23.46■■□□□ 1.35
HOXC10-201ENST00000303460 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.45■■□□□ 1.35
HOXC10-201ENST00000303460 HYPKQ9NX55 129 aa23.45■■□□□ 1.34
HOXC10-201ENST00000303460 DOT1LQ8TEK3 1739 aa23.44■■□□□ 1.34
HOXC10-201ENST00000303460 ADCY9O60503 1353 aa23.44■■□□□ 1.34
HOXC10-201ENST00000303460 USP21Q9UK80 565 aa23.44■■□□□ 1.34
HOXC10-201ENST00000303460 PI4KAP2A4QPH2 592 aa23.43■■□□□ 1.34
HOXC10-201ENST00000303460 PTCD1O75127 700 aaKnown RBP23.43■■□□□ 1.34
HOXC10-201ENST00000303460 FAM98CQ17RN3 349 aaKnown RBP23.43■■□□□ 1.34
HOXC10-201ENST00000303460 PI4KAP1Q8N8J0 262 aa23.43■■□□□ 1.34
HOXC10-201ENST00000303460 MARCH10Q8NA82 808 aaPredicted RBP23.43■■□□□ 1.34
HOXC10-201ENST00000303460 DDRGK1Q96HY6 314 aa23.43■■□□□ 1.34
HOXC10-201ENST00000303460 BCL9O00512 1426 aa23.43■■□□□ 1.34
HOXC10-201ENST00000303460 SIRT2Q8IXJ6 389 aa23.43■■□□□ 1.34
HOXC10-201ENST00000303460 ASAP1Q9ULH1 1129 aa23.43■■□□□ 1.34
HOXC10-201ENST00000303460 MYL6BP14649 208 aa23.41■■□□□ 1.34
HOXC10-201ENST00000303460 MEX3CQ5U5Q3 659 aaKnown RBP23.41■■□□□ 1.34
HOXC10-201ENST00000303460 LRP10Q7Z4F1 713 aa23.41■■□□□ 1.34
HOXC10-201ENST00000303460 ATG3Q9NT62 314 aa23.41■■□□□ 1.34
HOXC10-201ENST00000303460 KAT6BQ8WYB5 2073 aa23.41■■□□□ 1.34
HOXC10-201ENST00000303460 ATP10DQ9P241 1426 aa23.41■■□□□ 1.34
HOXC10-201ENST00000303460 DNAAF4Q8WXU2 420 aa23.41■■□□□ 1.34
HOXC10-201ENST00000303460 PIP4K2AP48426 406 aaPredicted RBP23.4■■□□□ 1.34
HOXC10-201ENST00000303460 NPM2Q86SE8 214 aaKnown RBP23.39■■□□□ 1.34
HOXC10-201ENST00000303460 PRIM1P49642 420 aaKnown RBP23.39■■□□□ 1.33
HOXC10-201ENST00000303460 RGS3P49796 1198 aa23.39■■□□□ 1.33
HOXC10-201ENST00000303460 AIMP1Q12904 312 aaKnown RBP23.38■■□□□ 1.33
HOXC10-201ENST00000303460 BEND3Q5T5X7 828 aa23.38■■□□□ 1.33
HOXC10-201ENST00000303460 KSR2Q6VAB6 950 aa23.38■■□□□ 1.33
HOXC10-201ENST00000303460 PDZRN3Q9UPQ7 1066 aa23.38■■□□□ 1.33
HOXC10-201ENST00000303460 MAP3K2Q9Y2U5 619 aa23.38■■□□□ 1.33
HOXC10-201ENST00000303460 SMC5Q8IY18 1101 aa23.37■■□□□ 1.33
HOXC10-201ENST00000303460 SYTL4Q96C24 671 aaPredicted RBP23.37■■□□□ 1.33
HOXC10-201ENST00000303460 XAGE3Q8WTP9 111 aa23.37■■□□□ 1.33
HOXC10-201ENST00000303460 SRCIN1Q9C0H9 1055 aa23.37■■□□□ 1.33
HOXC10-201ENST00000303460 AFF2P51816 1311 aa23.37■■□□□ 1.33
HOXC10-201ENST00000303460 NBPF26B4DH59 902 aa23.36■■□□□ 1.33
HOXC10-201ENST00000303460 NBPF14Q5TI25 921 aa23.36■■□□□ 1.33
HOXC10-201ENST00000303460 NBPF10Q6P3W6 841 aaKnown RBP23.36■■□□□ 1.33
HOXC10-201ENST00000303460 NBPF15Q8N660 670 aa23.36■■□□□ 1.33
HOXC10-201ENST00000303460 CEP85Q6P2H3 762 aa23.35■■□□□ 1.33
HOXC10-201ENST00000303460 COPS6Q7L5N1 327 aa23.35■■□□□ 1.33
HOXC10-201ENST00000303460 USP44Q9H0E7 712 aa23.35■■□□□ 1.33
HOXC10-201ENST00000303460 ANKRD44Q8N8A2 993 aa23.35■■□□□ 1.33
HOXC10-201ENST00000303460 THSD7AQ9UPZ6 1657 aa23.34■■□□□ 1.33
HOXC10-201ENST00000303460 C8orf34Q49A92 452 aa23.34■■□□□ 1.33
HOXC10-201ENST00000303460 ACSBG1Q96GR2 724 aa23.34■■□□□ 1.33
HOXC10-201ENST00000303460 ERBB4Q15303 1308 aa23.34■■□□□ 1.33
HOXC10-201ENST00000303460 DDX58O95786 925 aaKnown RBP23.33■■□□□ 1.33
HOXC10-201ENST00000303460 A1BGP04217 495 aa23.33■■□□□ 1.33
HOXC10-201ENST00000303460 GNAI3P08754 354 aa23.33■■□□□ 1.32
HOXC10-201ENST00000303460 RPAP2Q8IXW5 612 aaPredicted RBP23.33■■□□□ 1.32
HOXC10-201ENST00000303460 VSIG10Q8N0Z9 540 aa23.33■■□□□ 1.32
HOXC10-201ENST00000303460 RBM42Q9BTD8 480 aaKnown RBP23.33■■□□□ 1.32
HOXC10-201ENST00000303460 GNAI2P04899 355 aa23.32■■□□□ 1.32
HOXC10-201ENST00000303460 SLC4A9Q96Q91 983 aa23.32■■□□□ 1.32
HOXC10-201ENST00000303460 DNAJC10Q8IXB1 793 aa23.31■■□□□ 1.32
HOXC10-201ENST00000303460 GJD4Q96KN9 370 aaPredicted RBP23.31■■□□□ 1.32
HOXC10-201ENST00000303460 ATRNO75882 1429 aa23.3■■□□□ 1.32
HOXC10-201ENST00000303460 RIC3Q7Z5B4 369 aa23.3■■□□□ 1.32
HOXC10-201ENST00000303460 A0A0G2JS52 829 aa23.29■■□□□ 1.32
HOXC10-201ENST00000303460 UBTFL1P0CB47 393 aaPredicted RBP23.29■■□□□ 1.32
HOXC10-201ENST00000303460 CWF19L2Q2TBE0 894 aaKnown RBP23.29■■□□□ 1.32
HOXC10-201ENST00000303460 ANKRD13DQ6ZTN6 518 aa23.29■■□□□ 1.32
HOXC10-201ENST00000303460 GCC1Q96CN9 775 aa23.29■■□□□ 1.32
HOXC10-201ENST00000303460 LRRFIP2Q9Y608 721 aaKnown RBP23.29■■□□□ 1.32
HOXC10-201ENST00000303460 ARFGEF2Q9Y6D5 1785 aa23.28■■□□□ 1.32
HOXC10-201ENST00000303460 ALDH1L1O75891 902 aa23.28■■□□□ 1.32
HOXC10-201ENST00000303460 NBPF7P0C2Y1 421 aaPredicted RBP23.28■■□□□ 1.32
HOXC10-201ENST00000303460 NUCB1Q02818 461 aa23.28■■□□□ 1.32
HOXC10-201ENST00000303460 LINS1Q8NG48 757 aa23.28■■□□□ 1.32
HOXC10-201ENST00000303460 TEX13AQ9BXU3 409 aaPredicted RBP23.27■■□□□ 1.32
HOXC10-201ENST00000303460 TJP1Q07157 1748 aa23.27■■□□□ 1.32
HOXC10-201ENST00000303460 KCNQ2O43526 872 aa23.27■■□□□ 1.32
HOXC10-201ENST00000303460 IGKV5-2P06315 115 aa23.27■■□□□ 1.32
HOXC10-201ENST00000303460 DCTPP1Q9H773 170 aa23.27■■□□□ 1.32
HOXC10-201ENST00000303460 METTL22Q9BUU2 404 aaPredicted RBP23.26■■□□□ 1.31
HOXC10-201ENST00000303460 TTLL7Q6ZT98 887 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms