RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 MYT1Q01538 1121 aa16.43■□□□□ 0.22
CCDC7-202ENST00000302316 SLC4A10Q6U841 1118 aa16.43■□□□□ 0.22
CCDC7-202ENST00000302316 PIGBQ92521 554 aa16.43■□□□□ 0.22
CCDC7-202ENST00000302316 PCDHB15Q9Y5E8 787 aa16.43■□□□□ 0.22
CCDC7-202ENST00000302316 MARCH10Q8NA82 808 aaPredicted RBP16.43■□□□□ 0.22
CCDC7-202ENST00000302316 SYTL4Q96C24 671 aaPredicted RBP16.43■□□□□ 0.22
CCDC7-202ENST00000302316 BCL9O00512 1426 aa16.43■□□□□ 0.22
CCDC7-202ENST00000302316 ZBTB7BO15156 539 aaPredicted RBP16.42■□□□□ 0.22
CCDC7-202ENST00000302316 PTCD1O75127 700 aaKnown RBP16.42■□□□□ 0.22
CCDC7-202ENST00000302316 PROSER3Q2NL68 480 aa16.42■□□□□ 0.22
CCDC7-202ENST00000302316 CCT4P50991 539 aaKnown RBP16.42■□□□□ 0.22
CCDC7-202ENST00000302316 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCDC7-202ENST00000302316 PXDNLA1KZ92 1463 aa16.42■□□□□ 0.22
CCDC7-202ENST00000302316 HYPKQ9NX55 129 aa16.41■□□□□ 0.22
CCDC7-202ENST00000302316 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
CCDC7-202ENST00000302316 THSD7AQ9UPZ6 1657 aa16.41■□□□□ 0.22
CCDC7-202ENST00000302316 ASAP1Q9ULH1 1129 aa16.4■□□□□ 0.22
CCDC7-202ENST00000302316 ATRNO75882 1429 aa16.4■□□□□ 0.22
CCDC7-202ENST00000302316 IGHDP01880 384 aa16.4■□□□□ 0.22
CCDC7-202ENST00000302316 PRIM1P49642 420 aaKnown RBP16.4■□□□□ 0.22
CCDC7-202ENST00000302316 GJD4Q96KN9 370 aaPredicted RBP16.4■□□□□ 0.22
CCDC7-202ENST00000302316 N4BP2Q86UW6 1770 aaPredicted RBP16.39■□□□□ 0.22
CCDC7-202ENST00000302316 PDIA6Q15084 440 aa16.39■□□□□ 0.21
CCDC7-202ENST00000302316 ATG3Q9NT62 314 aa16.39■□□□□ 0.21
CCDC7-202ENST00000302316 TRPC5Q9UL62 973 aaPredicted RBP16.39■□□□□ 0.21
CCDC7-202ENST00000302316 ACSBG1Q96GR2 724 aa16.39■□□□□ 0.21
CCDC7-202ENST00000302316 MYL6BP14649 208 aa16.38■□□□□ 0.21
CCDC7-202ENST00000302316 RWDD1Q9H446 243 aaPredicted RBP16.38■□□□□ 0.21
CCDC7-202ENST00000302316 C1orf115Q9H7X2 142 aa16.38■□□□□ 0.21
CCDC7-202ENST00000302316 PI4KAP2A4QPH2 592 aa16.37■□□□□ 0.21
CCDC7-202ENST00000302316 PI4KAP1Q8N8J0 262 aa16.37■□□□□ 0.21
CCDC7-202ENST00000302316 KAT6BQ8WYB5 2073 aa16.37■□□□□ 0.21
CCDC7-202ENST00000302316 ADCY9O60503 1353 aa16.37■□□□□ 0.21
CCDC7-202ENST00000302316 ERBB4Q15303 1308 aa16.37■□□□□ 0.21
CCDC7-202ENST00000302316 DNAAF4Q8WXU2 420 aa16.37■□□□□ 0.21
CCDC7-202ENST00000302316 DDX58O95786 925 aaKnown RBP16.36■□□□□ 0.21
CCDC7-202ENST00000302316 PIP4K2AP48426 406 aaPredicted RBP16.36■□□□□ 0.21
CCDC7-202ENST00000302316 AIMP1Q12904 312 aaKnown RBP16.36■□□□□ 0.21
CCDC7-202ENST00000302316 MEIS3Q99687 375 aa16.36■□□□□ 0.21
CCDC7-202ENST00000302316 RBM42Q9BTD8 480 aaKnown RBP16.36■□□□□ 0.21
CCDC7-202ENST00000302316 VSIG10Q8N0Z9 540 aa16.36■□□□□ 0.21
CCDC7-202ENST00000302316 HDAC1Q13547 482 aaPredicted RBP16.35■□□□□ 0.21
CCDC7-202ENST00000302316 KSR2Q6VAB6 950 aa16.34■□□□□ 0.21
CCDC7-202ENST00000302316 XAGE3Q8WTP9 111 aa16.34■□□□□ 0.21
CCDC7-202ENST00000302316 MAP3K2Q9Y2U5 619 aa16.34■□□□□ 0.21
CCDC7-202ENST00000302316 ATP10DQ9P241 1426 aa16.34■□□□□ 0.21
CCDC7-202ENST00000302316 LRP10Q7Z4F1 713 aa16.34■□□□□ 0.21
CCDC7-202ENST00000302316 SRCIN1Q9C0H9 1055 aa16.34■□□□□ 0.21
CCDC7-202ENST00000302316 COPS6Q7L5N1 327 aa16.33■□□□□ 0.21
CCDC7-202ENST00000302316 TEX13AQ9BXU3 409 aaPredicted RBP16.33■□□□□ 0.21
CCDC7-202ENST00000302316 QTRT2Q9H974 415 aaKnown RBP16.33■□□□□ 0.21
CCDC7-202ENST00000302316 A1BGP04217 495 aa16.33■□□□□ 0.2
CCDC7-202ENST00000302316 BEND3Q5T5X7 828 aa16.33■□□□□ 0.2
CCDC7-202ENST00000302316 DNAJC10Q8IXB1 793 aa16.33■□□□□ 0.2
CCDC7-202ENST00000302316 NBPF26B4DH59 902 aa16.32■□□□□ 0.2
CCDC7-202ENST00000302316 NBPF14Q5TI25 921 aa16.32■□□□□ 0.2
CCDC7-202ENST00000302316 NBPF10Q6P3W6 841 aaKnown RBP16.32■□□□□ 0.2
CCDC7-202ENST00000302316 RIC3Q7Z5B4 369 aa16.32■□□□□ 0.2
CCDC7-202ENST00000302316 NBPF15Q8N660 670 aa16.32■□□□□ 0.2
CCDC7-202ENST00000302316 STARD3NLO95772 234 aa16.31■□□□□ 0.2
CCDC7-202ENST00000302316 GNAI3P08754 354 aa16.31■□□□□ 0.2
CCDC7-202ENST00000302316 KCNQ2O43526 872 aa16.31■□□□□ 0.2
CCDC7-202ENST00000302316 ONECUT3O60422 494 aaPredicted RBP16.31■□□□□ 0.2
CCDC7-202ENST00000302316 SKAP1Q86WV1 359 aa16.31■□□□□ 0.2
CCDC7-202ENST00000302316 SLC4A9Q96Q91 983 aa16.31■□□□□ 0.2
CCDC7-202ENST00000302316 SEPT12Q8IYM1 358 aa16.3■□□□□ 0.2
CCDC7-202ENST00000302316 TJP1Q07157 1748 aa16.3■□□□□ 0.2
CCDC7-202ENST00000302316 GNAI2P04899 355 aa16.3■□□□□ 0.2
CCDC7-202ENST00000302316 ANKRD13DQ6ZTN6 518 aa16.3■□□□□ 0.2
CCDC7-202ENST00000302316 PALLDQ8WX93 1383 aa16.3■□□□□ 0.2
CCDC7-202ENST00000302316 CEP85Q6P2H3 762 aa16.29■□□□□ 0.2
CCDC7-202ENST00000302316 SIRT2Q8IXJ6 389 aa16.29■□□□□ 0.2
CCDC7-202ENST00000302316 ALDH1L1O75891 902 aa16.28■□□□□ 0.2
CCDC7-202ENST00000302316 UBTFL1P0CB47 393 aaPredicted RBP16.28■□□□□ 0.2
CCDC7-202ENST00000302316 USP44Q9H0E7 712 aa16.28■□□□□ 0.2
CCDC7-202ENST00000302316 ARFGEF2Q9Y6D5 1785 aa16.28■□□□□ 0.2
CCDC7-202ENST00000302316 NEXNQ0ZGT2 675 aa16.28■□□□□ 0.2
CCDC7-202ENST00000302316 FAM182BQ5T319 152 aa16.28■□□□□ 0.2
CCDC7-202ENST00000302316 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
CCDC7-202ENST00000302316 ANKRD44Q8N8A2 993 aa16.28■□□□□ 0.2
CCDC7-202ENST00000302316 LINS1Q8NG48 757 aa16.28■□□□□ 0.2
CCDC7-202ENST00000302316 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
CCDC7-202ENST00000302316 NHSQ6T4R5 1651 aa16.28■□□□□ 0.2
CCDC7-202ENST00000302316 CWF19L2Q2TBE0 894 aaKnown RBP16.27■□□□□ 0.2
CCDC7-202ENST00000302316 SMC5Q8IY18 1101 aa16.27■□□□□ 0.2
CCDC7-202ENST00000302316 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.19
CCDC7-202ENST00000302316 CYP19A1P11511 503 aaPredicted RBP16.27■□□□□ 0.19
CCDC7-202ENST00000302316 SIK1P57059 783 aa16.27■□□□□ 0.19
CCDC7-202ENST00000302316 ZNF772Q68DY9 489 aaPredicted RBP16.27■□□□□ 0.19
CCDC7-202ENST00000302316 PLBD2Q8NHP8 589 aa16.27■□□□□ 0.19
CCDC7-202ENST00000302316 MYD88Q99836 296 aa16.27■□□□□ 0.19
CCDC7-202ENST00000302316 METTL22Q9BUU2 404 aaPredicted RBP16.27■□□□□ 0.19
CCDC7-202ENST00000302316 ZNF330Q9Y3S2 320 aaPredicted RBP16.27■□□□□ 0.19
CCDC7-202ENST00000302316 TTLL7Q6ZT98 887 aa16.26■□□□□ 0.19
CCDC7-202ENST00000302316 PDZRN3Q9UPQ7 1066 aa16.26■□□□□ 0.19
CCDC7-202ENST00000302316 LRRFIP2Q9Y608 721 aaKnown RBP16.26■□□□□ 0.19
CCDC7-202ENST00000302316 ATP6V1AP38606 617 aa16.25■□□□□ 0.19
CCDC7-202ENST00000302316 RGS3P49796 1198 aa16.25■□□□□ 0.19
CCDC7-202ENST00000302316 CICQ96RK0 1608 aaPredicted RBP16.25■□□□□ 0.19
CCDC7-202ENST00000302316 NUP188Q5SRE5 1749 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms