RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 IFFO2Q5TF58 517 aa19.9■□□□□ 0.78
UBXN1-202ENST00000301935 RUNDC1Q96C34 613 aa19.9■□□□□ 0.78
UBXN1-202ENST00000301935 USP42Q9H9J4 1324 aaKnown RBP19.9■□□□□ 0.78
UBXN1-202ENST00000301935 MRC1P22897 1456 aa19.9■□□□□ 0.78
UBXN1-202ENST00000301935 NCBP3Q53F19 620 aaKnown RBP19.88■□□□□ 0.77
UBXN1-202ENST00000301935 ARHGAP27Q6ZUM4 889 aa19.88■□□□□ 0.77
UBXN1-202ENST00000301935 SRP68Q9UHB9 627 aaKnown RBP19.88■□□□□ 0.77
UBXN1-202ENST00000301935 KCNA3P22001 575 aa19.87■□□□□ 0.77
UBXN1-202ENST00000301935 RSPH6AQ9H0K4 717 aa19.87■□□□□ 0.77
UBXN1-202ENST00000301935 MAPK8IP3Q9UPT6 1336 aa19.86■□□□□ 0.77
UBXN1-202ENST00000301935 DDR1Q08345 913 aa19.86■□□□□ 0.77
UBXN1-202ENST00000301935 FKBP8Q14318 412 aa19.86■□□□□ 0.77
UBXN1-202ENST00000301935 AKAP4Q5JQC9 854 aa19.85■□□□□ 0.77
UBXN1-202ENST00000301935 PLEKHF1Q96S99 279 aa19.85■□□□□ 0.77
UBXN1-202ENST00000301935 KCPQ6ZWJ8 1503 aa19.85■□□□□ 0.77
UBXN1-202ENST00000301935 AFDNP55196 1824 aaKnown RBP19.84■□□□□ 0.77
UBXN1-202ENST00000301935 TOMM70O94826 608 aa19.84■□□□□ 0.77
UBXN1-202ENST00000301935 HMOX1P09601 288 aa19.84■□□□□ 0.77
UBXN1-202ENST00000301935 INTS5Q6P9B9 1019 aaKnown RBP19.84■□□□□ 0.77
UBXN1-202ENST00000301935 SLC52A2Q9HAB3 445 aa19.84■□□□□ 0.77
UBXN1-202ENST00000301935 PIM2Q9P1W9 311 aa19.84■□□□□ 0.77
UBXN1-202ENST00000301935 UBR2Q8IWV8 1755 aa19.83■□□□□ 0.77
UBXN1-202ENST00000301935 NRXN2Q9P2S2 1712 aa19.83■□□□□ 0.77
UBXN1-202ENST00000301935 PRKAR2BP31323 418 aa19.83■□□□□ 0.77
UBXN1-202ENST00000301935 DLEC1Q9Y238 1755 aa19.83■□□□□ 0.76
UBXN1-202ENST00000301935 WDR90Q96KV7 1748 aa19.82■□□□□ 0.76
UBXN1-202ENST00000301935 DNAJC10Q8IXB1 793 aa19.82■□□□□ 0.76
UBXN1-202ENST00000301935 NMRK2Q9NPI5 230 aa19.82■□□□□ 0.76
UBXN1-202ENST00000301935 TNRC6CQ9HCJ0 1690 aaKnown RBP19.81■□□□□ 0.76
UBXN1-202ENST00000301935 SOS1Q07889 1333 aaPredicted RBP19.81■□□□□ 0.76
UBXN1-202ENST00000301935 POLRMTO00411 1230 aaKnown RBP19.81■□□□□ 0.76
UBXN1-202ENST00000301935 APLP1P51693 650 aa19.81■□□□□ 0.76
UBXN1-202ENST00000301935 HNRNPUQ00839 825 aaKnown RBP eCLIP19.81■□□□□ 0.76
UBXN1-202ENST00000301935 DALRD3Q5D0E6 543 aaKnown RBP19.81■□□□□ 0.76
UBXN1-202ENST00000301935 C9orf131Q5VYM1 1079 aa19.81■□□□□ 0.76
UBXN1-202ENST00000301935 SBF1O95248 1867 aa19.81■□□□□ 0.76
UBXN1-202ENST00000301935 TM4SF1P30408 202 aa19.8■□□□□ 0.76
UBXN1-202ENST00000301935 CCDC146Q8IYE0 955 aa19.8■□□□□ 0.76
UBXN1-202ENST00000301935 LGR6Q9HBX8 967 aa19.8■□□□□ 0.76
UBXN1-202ENST00000301935 COL15A1P39059 1388 aa19.8■□□□□ 0.76
UBXN1-202ENST00000301935 APAF1O14727 1248 aa19.79■□□□□ 0.76
UBXN1-202ENST00000301935 RNMTO43148 476 aaKnown RBP19.79■□□□□ 0.76
UBXN1-202ENST00000301935 ZPR1O75312 459 aa19.79■□□□□ 0.76
UBXN1-202ENST00000301935 CHRNA5P30532 468 aa19.79■□□□□ 0.76
UBXN1-202ENST00000301935 USPL1Q5W0Q7 1092 aa19.79■□□□□ 0.76
UBXN1-202ENST00000301935 CYP19A1P11511 503 aaPredicted RBP19.78■□□□□ 0.76
UBXN1-202ENST00000301935 GAS2L2Q8NHY3 880 aa19.78■□□□□ 0.76
UBXN1-202ENST00000301935 SLC39A6Q13433 755 aa19.77■□□□□ 0.76
UBXN1-202ENST00000301935 NFE2L2Q16236 605 aa19.77■□□□□ 0.76
UBXN1-202ENST00000301935 CCDC27Q2M243 656 aa19.77■□□□□ 0.76
UBXN1-202ENST00000301935 TMPOP42166 694 aaKnown RBP19.76■□□□□ 0.75
UBXN1-202ENST00000301935 LMOD3Q0VAK6 560 aa19.76■□□□□ 0.75
UBXN1-202ENST00000301935 RBM46Q8TBY0 533 aaKnown RBP19.76■□□□□ 0.75
UBXN1-202ENST00000301935 YTHDC1Q96MU7 727 aaKnown RBP19.76■□□□□ 0.75
UBXN1-202ENST00000301935 RNF181Q9P0P0 153 aa19.76■□□□□ 0.75
UBXN1-202ENST00000301935 NARFQ9UHQ1 456 aa19.76■□□□□ 0.75
UBXN1-202ENST00000301935 ZBTB1Q9Y2K1 713 aa19.76■□□□□ 0.75
UBXN1-202ENST00000301935 ZBED9Q6R2W3 1325 aa19.76■□□□□ 0.75
UBXN1-202ENST00000301935 MTHFSDQ2M296 383 aaKnown RBP19.75■□□□□ 0.75
UBXN1-202ENST00000301935 PHACTR3Q96KR7 559 aa19.75■□□□□ 0.75
UBXN1-202ENST00000301935 SIPA1L3O60292 1781 aaPredicted RBP19.75■□□□□ 0.75
UBXN1-202ENST00000301935 KDM2BQ8NHM5 1336 aa19.75■□□□□ 0.75
UBXN1-202ENST00000301935 SCN7AQ01118 1682 aa19.75■□□□□ 0.75
UBXN1-202ENST00000301935 TIAM2Q8IVF5 1701 aa19.74■□□□□ 0.75
UBXN1-202ENST00000301935 NFIXQ14938 502 aa19.74■□□□□ 0.75
UBXN1-202ENST00000301935 VSIG10Q8N0Z9 540 aa19.74■□□□□ 0.75
UBXN1-202ENST00000301935 HTATSF1O43719 755 aaKnown RBP19.73■□□□□ 0.75
UBXN1-202ENST00000301935 C16orf71Q8IYS4 520 aaPredicted RBP19.73■□□□□ 0.75
UBXN1-202ENST00000301935 DNAJC5GQ8N7S2 189 aa19.73■□□□□ 0.75
UBXN1-202ENST00000301935 RIPK4P57078 832 aa19.72■□□□□ 0.75
UBXN1-202ENST00000301935 BCL2L12Q9HB09 334 aa19.72■□□□□ 0.75
UBXN1-202ENST00000301935 CARMIL3Q8ND23 1372 aa19.7■□□□□ 0.74
UBXN1-202ENST00000301935 SERPINB2P05120 415 aa19.7■□□□□ 0.74
UBXN1-202ENST00000301935 RASSF7Q02833 373 aa19.7■□□□□ 0.74
UBXN1-202ENST00000301935 CALD1Q05682 793 aaKnown RBP19.7■□□□□ 0.74
UBXN1-202ENST00000301935 ANKRD31Q8N7Z5 1873 aa19.7■□□□□ 0.74
UBXN1-202ENST00000301935 ZC3H4Q9UPT8 1303 aaKnown RBP19.7■□□□□ 0.74
UBXN1-202ENST00000301935 FSTL1Q12841 308 aa19.69■□□□□ 0.74
UBXN1-202ENST00000301935 WDR63Q8IWG1 891 aa19.69■□□□□ 0.74
UBXN1-202ENST00000301935 TTC5Q8N0Z6 440 aa19.69■□□□□ 0.74
UBXN1-202ENST00000301935 CCDC88AQ3V6T2 1871 aa19.69■□□□□ 0.74
UBXN1-202ENST00000301935 COL11A2P13942 1736 aaPredicted RBP19.68■□□□□ 0.74
UBXN1-202ENST00000301935 GNAT3A8MTJ3 354 aa19.68■□□□□ 0.74
UBXN1-202ENST00000301935 CANXP27824 592 aaKnown RBP19.68■□□□□ 0.74
UBXN1-202ENST00000301935 NEUROD2Q15784 382 aa19.68■□□□□ 0.74
UBXN1-202ENST00000301935 WWC1Q8IX03 1113 aa19.68■□□□□ 0.74
UBXN1-202ENST00000301935 RTF1Q92541 710 aaKnown RBP19.68■□□□□ 0.74
UBXN1-202ENST00000301935 RRAGCQ9HB90 399 aa19.68■□□□□ 0.74
UBXN1-202ENST00000301935 RRP7AQ9Y3A4 280 aaKnown RBP19.67■□□□□ 0.74
UBXN1-202ENST00000301935 BCORQ6W2J9 1755 aa19.66■□□□□ 0.74
UBXN1-202ENST00000301935 STARD3NLO95772 234 aa19.66■□□□□ 0.74
UBXN1-202ENST00000301935 LMNB1P20700 586 aa19.66■□□□□ 0.74
UBXN1-202ENST00000301935 EIF5P55010 431 aaKnown RBP19.66■□□□□ 0.74
UBXN1-202ENST00000301935 TTLL6Q8N841 843 aa19.66■□□□□ 0.74
UBXN1-202ENST00000301935 SALL2Q9Y467 1007 aaPredicted RBP19.66■□□□□ 0.74
UBXN1-202ENST00000301935 ZNF521Q96K83 1311 aa19.66■□□□□ 0.74
UBXN1-202ENST00000301935 HEG1Q9ULI3 1381 aa19.66■□□□□ 0.74
UBXN1-202ENST00000301935 PRELPP51888 382 aa19.65■□□□□ 0.74
UBXN1-202ENST00000301935 HTRA3P83110 453 aa19.65■□□□□ 0.74
UBXN1-202ENST00000301935 C2CD5Q86YS7 1000 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms