RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 GRIPAP1Q4V328 841 aa13.04□□□□□ -0.32
GCN1-201ENST00000300648 KIF1BPQ96EK5 621 aa13.04□□□□□ -0.32
GCN1-201ENST00000300648 EIF2AK4Q9P2K8 1649 aaKnown RBP13.04□□□□□ -0.32
GCN1-201ENST00000300648 SNW1Q13573 536 aaKnown RBP13.04□□□□□ -0.32
GCN1-201ENST00000300648 SPECC1Q5M775 1068 aa13.04□□□□□ -0.32
GCN1-201ENST00000300648 EHMT1Q9H9B1 1298 aa13.04□□□□□ -0.32
GCN1-201ENST00000300648 PRKAR2BP31323 418 aa13.04□□□□□ -0.32
GCN1-201ENST00000300648 DAAM2Q86T65 1068 aa13.04□□□□□ -0.32
GCN1-201ENST00000300648 OPA1O60313 960 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 HSF2BPO75031 334 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 IRX3P78415 501 aaPredicted RBP13.03□□□□□ -0.32
GCN1-201ENST00000300648 AIMP1Q12904 312 aaKnown RBP13.03□□□□□ -0.32
GCN1-201ENST00000300648 CCDC155Q8N6L0 562 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 SYTL4Q96C24 671 aaPredicted RBP13.03□□□□□ -0.32
GCN1-201ENST00000300648 UBE2HP62256 183 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 RASAL2Q9UJF2 1139 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 FCHSD2O94868 740 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 TDO2P48775 406 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 NLRP6P59044 892 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 SEPT6Q14141 434 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 A0A087WZG4 1122 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 NUTM2DQ5VT03 806 aaPredicted RBP13.03□□□□□ -0.32
GCN1-201ENST00000300648 LRRC45Q96CN5 670 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
GCN1-201ENST00000300648 IKBKGQ9Y6K9 419 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 RNF187Q5TA31 235 aaPredicted RBP13.03□□□□□ -0.32
GCN1-201ENST00000300648 AACSQ86V21 672 aa13.03□□□□□ -0.32
GCN1-201ENST00000300648 URI1O94763 535 aaPredicted RBP13.02□□□□□ -0.32
GCN1-201ENST00000300648 TSNARE1Q96NA8 513 aa13.02□□□□□ -0.32
GCN1-201ENST00000300648 ZHX3Q9H4I2 956 aa13.02□□□□□ -0.32
GCN1-201ENST00000300648 PIP4K2BP78356 416 aa13.02□□□□□ -0.32
GCN1-201ENST00000300648 EXOSC9Q06265 439 aaKnown RBP13.02□□□□□ -0.32
GCN1-201ENST00000300648 LARP1Q6PKG0 1096 aaKnown RBP13.02□□□□□ -0.32
GCN1-201ENST00000300648 MPHOSPH8Q99549 860 aa13.02□□□□□ -0.32
GCN1-201ENST00000300648 ZSCAN16Q9H4T2 348 aaPredicted RBP13.02□□□□□ -0.32
GCN1-201ENST00000300648 HMG20BQ9P0W2 317 aa13.02□□□□□ -0.32
GCN1-201ENST00000300648 KLHL40Q2TBA0 621 aa13.02□□□□□ -0.33
GCN1-201ENST00000300648 CCDC178Q5BJE1 867 aa13.02□□□□□ -0.33
GCN1-201ENST00000300648 RMND1Q9NWS8 449 aa13.02□□□□□ -0.33
GCN1-201ENST00000300648 MSH5O43196 834 aa13.02□□□□□ -0.33
GCN1-201ENST00000300648 CCDC113Q9H0I3 377 aa13.02□□□□□ -0.33
GCN1-201ENST00000300648 SH3BGRP55822 239 aaPredicted RBP13.01□□□□□ -0.33
GCN1-201ENST00000300648 NLRP2Q9NX02 1062 aa13.01□□□□□ -0.33
GCN1-201ENST00000300648 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.01□□□□□ -0.335e-7■■□□□ 12.7
GCN1-201ENST00000300648 WDR66Q8TBY9 1149 aa13.01□□□□□ -0.33
GCN1-201ENST00000300648 LIMCH1Q9UPQ0 1083 aa13.01□□□□□ -0.33
GCN1-201ENST00000300648 C8orf76Q96K31 380 aa13.01□□□□□ -0.33
GCN1-201ENST00000300648 PEG3Q9GZU2 1588 aa13.01□□□□□ -0.33
GCN1-201ENST00000300648 CEP128Q6ZU80 1094 aa13.01□□□□□ -0.33
GCN1-201ENST00000300648 ABTB2Q8N961 1025 aa13.01□□□□□ -0.33
GCN1-201ENST00000300648 CTTNBP2Q8WZ74 1663 aa13.01□□□□□ -0.33
GCN1-201ENST00000300648 SETSIPP0DME0 302 aa13.01□□□□□ -0.33
GCN1-201ENST00000300648 USP37Q86T82 979 aa13.01□□□□□ -0.33
GCN1-201ENST00000300648 NUTM2FA1L443 756 aa13.01□□□□□ -0.33
GCN1-201ENST00000300648 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
GCN1-201ENST00000300648 MX1P20591 662 aa13□□□□□ -0.33
GCN1-201ENST00000300648 SPAG1Q07617 926 aa13□□□□□ -0.33
GCN1-201ENST00000300648 RUSC2Q8N2Y8 1516 aa13□□□□□ -0.33
GCN1-201ENST00000300648 GTF2A1P52655 376 aaPredicted RBP13□□□□□ -0.33
GCN1-201ENST00000300648 CEP126Q9P2H0 1117 aa13□□□□□ -0.33
GCN1-201ENST00000300648 SRGAP3O43295 1099 aa13□□□□□ -0.33
GCN1-201ENST00000300648 CEP135Q66GS9 1140 aa13□□□□□ -0.33
GCN1-201ENST00000300648 MSL1Q68DK7 614 aa13□□□□□ -0.33
GCN1-201ENST00000300648 RTEL1-TNFRSF6BF6WH68 1400 aa13□□□□□ -0.33
GCN1-201ENST00000300648 ZNF76P36508 570 aa13□□□□□ -0.33
GCN1-201ENST00000300648 AIDAQ96BJ3 306 aa13□□□□□ -0.33
GCN1-201ENST00000300648 ARAP1Q96P48 1450 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 NUP133Q8WUM0 1156 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 ZNF652Q9Y2D9 606 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 CLCN1P35523 988 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 USH1CQ9Y6N9 552 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 STK3Q13188 491 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 GOPCQ9HD26 462 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 LRPPRCP42704 1394 aaKnown RBP12.99□□□□□ -0.33
GCN1-201ENST00000300648 CBX1P83916 185 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
GCN1-201ENST00000300648 HLTFQ14527 1009 aaKnown RBP eCLIP12.99□□□□□ -0.337e-7■□□□□ 10.6
GCN1-201ENST00000300648 CCDC77Q9BR77 488 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 ACTN2P35609 894 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 C16orf45Q96MC5 204 aaPredicted RBP12.99□□□□□ -0.33
GCN1-201ENST00000300648 RAI14Q9P0K7 980 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 KIF4AO95239 1232 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 TICAM2Q86XR7 235 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 ARFGAP2Q8N6H7 521 aa12.99□□□□□ -0.33
GCN1-201ENST00000300648 DDX23Q9BUQ8 820 aaKnown RBP12.98□□□□□ -0.33
GCN1-201ENST00000300648 SELENOOQ9BVL4 669 aa12.98□□□□□ -0.33
GCN1-201ENST00000300648 AMOTQ4VCS5 1084 aa12.98□□□□□ -0.33
GCN1-201ENST00000300648 LMAN1P49257 510 aa12.98□□□□□ -0.33
GCN1-201ENST00000300648 CTCFLQ8NI51 663 aaPredicted RBP12.98□□□□□ -0.33
GCN1-201ENST00000300648 PTPRCP08575 1304 aa12.98□□□□□ -0.33
GCN1-201ENST00000300648 JAKMIP2Q96AA8 810 aa12.98□□□□□ -0.33
GCN1-201ENST00000300648 SLF2Q8IX21 1173 aa12.98□□□□□ -0.33
GCN1-201ENST00000300648 CTNNA2P26232 953 aa12.97□□□□□ -0.33
GCN1-201ENST00000300648 CYB5RLQ6IPT4 315 aa12.97□□□□□ -0.33
GCN1-201ENST00000300648 CWC27Q6UX04 472 aaKnown RBP12.97□□□□□ -0.33
GCN1-201ENST00000300648 FBF1Q8TES7 1133 aa12.97□□□□□ -0.33
GCN1-201ENST00000300648 HOMER2Q9NSB8 354 aa12.97□□□□□ -0.33
GCN1-201ENST00000300648 CCDC110Q8TBZ0 833 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms