RNA–Protein interactions for RNA: ENST00000300215.7

EPB42-201, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 4,553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-201ENST00000300215 USP25Q9UHP3 1055 aa13.32□□□□□ -0.28
EPB42-201ENST00000300215 USP5P45974 858 aa13.31□□□□□ -0.28
EPB42-201ENST00000300215 AIDAQ96BJ3 306 aa13.31□□□□□ -0.28
EPB42-201ENST00000300215 SPG7Q9UQ90 795 aa13.31□□□□□ -0.28
EPB42-201ENST00000300215 PTPN14Q15678 1187 aa13.31□□□□□ -0.28
EPB42-201ENST00000300215 KIAA1328Q86T90 577 aa13.31□□□□□ -0.28
EPB42-201ENST00000300215 TBC1D2Q9BYX2 928 aa13.31□□□□□ -0.28
EPB42-201ENST00000300215 RRP9O43818 475 aaKnown RBP13.31□□□□□ -0.28
EPB42-201ENST00000300215 BICDL1Q6ZP65 573 aa13.31□□□□□ -0.28
EPB42-201ENST00000300215 IMMTQ16891 758 aaKnown RBP13.3□□□□□ -0.28
EPB42-201ENST00000300215 SMTNL1A8MU46 457 aa13.3□□□□□ -0.28
EPB42-201ENST00000300215 URI1O94763 535 aaPredicted RBP13.3□□□□□ -0.28
EPB42-201ENST00000300215 NUTM2BA6NNL0 878 aaPredicted RBP13.3□□□□□ -0.28
EPB42-201ENST00000300215 MINDY4BA8MYZ0 360 aa13.3□□□□□ -0.28
EPB42-201ENST00000300215 NUTM2EB1AL46 878 aaPredicted RBP13.3□□□□□ -0.28
EPB42-201ENST00000300215 NUTM2AQ8IVF1 878 aaPredicted RBP13.3□□□□□ -0.28
EPB42-201ENST00000300215 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
EPB42-201ENST00000300215 PHF23Q9BUL5 403 aaPredicted RBP13.29□□□□□ -0.28
EPB42-201ENST00000300215 CCDC8Q9H0W5 538 aaPredicted RBP13.29□□□□□ -0.28
EPB42-201ENST00000300215 PRDM10Q9NQV6 1147 aa13.29□□□□□ -0.28
EPB42-201ENST00000300215 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
EPB42-201ENST00000300215 PER1O15534 1290 aaPredicted RBP13.29□□□□□ -0.28
EPB42-201ENST00000300215 METTL24Q5JXM2 366 aa13.29□□□□□ -0.28
EPB42-201ENST00000300215 ANKLE2Q86XL3 938 aa13.29□□□□□ -0.28
EPB42-201ENST00000300215 SCAND2PQ9GZW5 306 aaPredicted RBP13.29□□□□□ -0.28
EPB42-201ENST00000300215 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
EPB42-201ENST00000300215 TMCO3Q6UWJ1 677 aa13.29□□□□□ -0.28
EPB42-201ENST00000300215 GOLGA6L7A0A1B0GV03 622 aa13.29□□□□□ -0.28
EPB42-201ENST00000300215 DNA2P51530 1060 aa13.29□□□□□ -0.28
EPB42-201ENST00000300215 TAF7Q15545 349 aaPredicted RBP13.29□□□□□ -0.28
EPB42-201ENST00000300215 TRMT1Q9NXH9 659 aaKnown RBP13.29□□□□□ -0.28
EPB42-201ENST00000300215 AMOTL2Q9Y2J4 779 aa13.29□□□□□ -0.28
EPB42-201ENST00000300215 PPFIA3O75145 1194 aa13.28□□□□□ -0.28
EPB42-201ENST00000300215 CBX1P83916 185 aa13.28□□□□□ -0.28
EPB42-201ENST00000300215 WWC2Q6AWC2 1192 aa13.28□□□□□ -0.28
EPB42-201ENST00000300215 CRACR2AQ9BSW2 395 aa13.28□□□□□ -0.28
EPB42-201ENST00000300215 CARD14Q9BXL6 1004 aa13.28□□□□□ -0.28
EPB42-201ENST00000300215 TNPO1Q92973 898 aaKnown RBP13.28□□□□□ -0.28
EPB42-201ENST00000300215 ABCC2Q92887 1545 aa13.28□□□□□ -0.28
EPB42-201ENST00000300215 SHANK2Q9UPX8 1470 aa13.28□□□□□ -0.28
EPB42-201ENST00000300215 GNAT3A8MTJ3 354 aa13.28□□□□□ -0.28
EPB42-201ENST00000300215 KIF4BQ2VIQ3 1234 aa13.27□□□□□ -0.28
EPB42-201ENST00000300215 KIF18AQ8NI77 898 aa13.27□□□□□ -0.28
EPB42-201ENST00000300215 C16orf45Q96MC5 204 aaPredicted RBP13.27□□□□□ -0.28
EPB42-201ENST00000300215 TEX14Q8IWB6 1497 aa13.27□□□□□ -0.28
EPB42-201ENST00000300215 SSR1P43307 286 aaKnown RBP13.27□□□□□ -0.28
EPB42-201ENST00000300215 TAF4BQ92750 862 aa13.27□□□□□ -0.28
EPB42-201ENST00000300215 TXLNBQ8N3L3 684 aa13.27□□□□□ -0.29
EPB42-201ENST00000300215 C8orf76Q96K31 380 aa13.27□□□□□ -0.29
EPB42-201ENST00000300215 ZNF76P36508 570 aa13.26□□□□□ -0.29
EPB42-201ENST00000300215 ZRSR2Q15696 482 aaKnown RBP13.26□□□□□ -0.29
EPB42-201ENST00000300215 CCDC183Q5T5S1 534 aa13.26□□□□□ -0.29
EPB42-201ENST00000300215 CPLX3Q8WVH0 158 aa13.26□□□□□ -0.29
EPB42-201ENST00000300215 ANO10Q9NW15 660 aa13.26□□□□□ -0.29
EPB42-201ENST00000300215 ZNF518AQ6AHZ1 1483 aa13.26□□□□□ -0.29
EPB42-201ENST00000300215 BIN1O00499 593 aa13.26□□□□□ -0.29
EPB42-201ENST00000300215 IFIT1P09914 478 aaKnown RBP13.26□□□□□ -0.29
EPB42-201ENST00000300215 WASF1Q92558 559 aa13.26□□□□□ -0.29
EPB42-201ENST00000300215 PARD3Q8TEW0 1356 aa13.26□□□□□ -0.29
EPB42-201ENST00000300215 PDIA4P13667 645 aaKnown RBP13.25□□□□□ -0.29
EPB42-201ENST00000300215 USHBP1Q8N6Y0 703 aa13.25□□□□□ -0.29
EPB42-201ENST00000300215 KDM6BO15054 1643 aa13.25□□□□□ -0.29
EPB42-201ENST00000300215 TRIM27P14373 513 aa13.25□□□□□ -0.29
EPB42-201ENST00000300215 CCT2P78371 535 aaKnown RBP13.25□□□□□ -0.29
EPB42-201ENST00000300215 IQCEQ6IPM2 695 aa13.25□□□□□ -0.29
EPB42-201ENST00000300215 TRERF1Q96PN7 1200 aa13.25□□□□□ -0.29
EPB42-201ENST00000300215 NAPBQ9H115 298 aa13.25□□□□□ -0.29
EPB42-201ENST00000300215 ADGRL2O95490 1459 aa13.25□□□□□ -0.29
EPB42-201ENST00000300215 TOP1P11387 765 aaKnown RBP13.25□□□□□ -0.29
EPB42-201ENST00000300215 IBSPP21815 317 aaPredicted RBP13.25□□□□□ -0.29
EPB42-201ENST00000300215 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
EPB42-201ENST00000300215 CLIP2Q9UDT6 1046 aa13.25□□□□□ -0.29
EPB42-201ENST00000300215 TSHZ3Q63HK5 1081 aa13.24□□□□□ -0.29
EPB42-201ENST00000300215 LIMCH1Q9UPQ0 1083 aa13.24□□□□□ -0.29
EPB42-201ENST00000300215 PANK2Q9BZ23 570 aa13.24□□□□□ -0.29
EPB42-201ENST00000300215 CCDC113Q9H0I3 377 aa13.24□□□□□ -0.29
EPB42-201ENST00000300215 TNNT1P13805 278 aa13.23□□□□□ -0.29
EPB42-201ENST00000300215 LARP1Q6PKG0 1096 aaKnown RBP13.23□□□□□ -0.29
EPB42-201ENST00000300215 MYD88Q99836 296 aa13.23□□□□□ -0.29
EPB42-201ENST00000300215 TMX1Q9H3N1 280 aa13.23□□□□□ -0.29
EPB42-201ENST00000300215 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
EPB42-201ENST00000300215 POLR3GO15318 223 aaPredicted RBP13.23□□□□□ -0.29
EPB42-201ENST00000300215 KIF2AO00139 706 aaPredicted RBP13.23□□□□□ -0.29
EPB42-201ENST00000300215 SPA17Q15506 151 aa13.23□□□□□ -0.29
EPB42-201ENST00000300215 SH2B1Q9NRF2 756 aaPredicted RBP13.23□□□□□ -0.29
EPB42-201ENST00000300215 POGZQ7Z3K3 1410 aa13.23□□□□□ -0.29
EPB42-201ENST00000300215 ZSCAN12O43309 604 aa13.23□□□□□ -0.29
EPB42-201ENST00000300215 FOXO3O43524 673 aa13.23□□□□□ -0.29
EPB42-201ENST00000300215 CCDC148Q8NFR7 591 aa13.23□□□□□ -0.29
EPB42-201ENST00000300215 FAM83GA6ND36 823 aa13.22□□□□□ -0.29
EPB42-201ENST00000300215 RANBP6O60518 1105 aaKnown RBP13.22□□□□□ -0.29
EPB42-201ENST00000300215 EZRP15311 586 aaKnown RBP13.22□□□□□ -0.29
EPB42-201ENST00000300215 UBA5Q9GZZ9 404 aa13.22□□□□□ -0.29
EPB42-201ENST00000300215 MKNK2Q9HBH9 465 aa13.22□□□□□ -0.29
EPB42-201ENST00000300215 CEP131Q9UPN4 1083 aa13.22□□□□□ -0.29
EPB42-201ENST00000300215 KIF5CO60282 957 aa13.22□□□□□ -0.29
EPB42-201ENST00000300215 CACNA2D4Q7Z3S7 1137 aa13.22□□□□□ -0.29
EPB42-201ENST00000300215 FSIP1Q8NA03 581 aa13.22□□□□□ -0.29
EPB42-201ENST00000300215 NKTRP30414 1462 aaKnown RBP13.22□□□□□ -0.29
EPB42-201ENST00000300215 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms