RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
CLPX-201ENST00000300107 HMGB1P09429 215 aaKnown RBP14.94□□□□□ -0.02
CLPX-201ENST00000300107 GTF2F1P35269 517 aaKnown RBP eCLIP14.94□□□□□ -0.027e-13■■■□□ 17.6
CLPX-201ENST00000300107 TRERF1Q96PN7 1200 aa14.94□□□□□ -0.02
CLPX-201ENST00000300107 FSIP1Q8NA03 581 aa14.94□□□□□ -0.02
CLPX-201ENST00000300107 SHTN1A0MZ66 631 aa14.93□□□□□ -0.02
CLPX-201ENST00000300107 HS1BP3Q53T59 392 aa14.93□□□□□ -0.02
CLPX-201ENST00000300107 NEFHP12036 1026 aa14.93□□□□□ -0.02
CLPX-201ENST00000300107 PTPRCP08575 1304 aa14.93□□□□□ -0.02
CLPX-201ENST00000300107 IKQ13123 557 aaPredicted RBP14.93□□□□□ -0.02
CLPX-201ENST00000300107 STX1AQ16623 288 aa14.93□□□□□ -0.02
CLPX-201ENST00000300107 SPG7Q9UQ90 795 aa14.93□□□□□ -0.02
CLPX-201ENST00000300107 IL16Q14005 1332 aa14.93□□□□□ -0.02
CLPX-201ENST00000300107 TDO2P48775 406 aa14.93□□□□□ -0.02
CLPX-201ENST00000300107 SNW1Q13573 536 aaKnown RBP14.93□□□□□ -0.02
CLPX-201ENST00000300107 GIMAP6Q6P9H5 292 aa14.93□□□□□ -0.02
CLPX-201ENST00000300107 CD109Q6YHK3 1445 aa14.92□□□□□ -0.02
CLPX-201ENST00000300107 GUCY1B3Q02153 619 aa14.92□□□□□ -0.02
CLPX-201ENST00000300107 TAX1BP1Q86VP1 789 aa14.92□□□□□ -0.02
CLPX-201ENST00000300107 CEP135Q66GS9 1140 aa14.92□□□□□ -0.02
CLPX-201ENST00000300107 KLHL10Q6JEL2 608 aa14.92□□□□□ -0.02
CLPX-201ENST00000300107 CCDC141Q6ZP82 1450 aa14.92□□□□□ -0.02
CLPX-201ENST00000300107 MCM3P25205 808 aa14.92□□□□□ -0.02
CLPX-201ENST00000300107 IDI1Q13907 227 aa14.92□□□□□ -0.02
CLPX-201ENST00000300107 TAF7Q15545 349 aaPredicted RBP14.92□□□□□ -0.02
CLPX-201ENST00000300107 TAF4BQ92750 862 aa14.92□□□□□ -0.02
CLPX-201ENST00000300107 ZNF830Q96NB3 372 aaPredicted RBP14.92□□□□□ -0.02
CLPX-201ENST00000300107 ZHX3Q9H4I2 956 aa14.92□□□□□ -0.02
CLPX-201ENST00000300107 PCF11O94913 1555 aaKnown RBP14.92□□□□□ -0.02
CLPX-201ENST00000300107 TMC6Q7Z403 805 aa14.92□□□□□ -0.02
CLPX-201ENST00000300107 BMP2KQ9NSY1 1161 aaPredicted RBP14.92□□□□□ -0.02
CLPX-201ENST00000300107 ARHGAP45Q92619 1136 aa14.91□□□□□ -0.02
CLPX-201ENST00000300107 SOGA3Q5TF21 947 aa14.91□□□□□ -0.02
CLPX-201ENST00000300107 KRT222Q8N1A0 295 aa14.91□□□□□ -0.02
CLPX-201ENST00000300107 ECHDC1Q9NTX5 307 aa14.91□□□□□ -0.02
CLPX-201ENST00000300107 PTPN23Q9H3S7 1636 aa14.91□□□□□ -0.02
CLPX-201ENST00000300107 SDSP20132 328 aa14.91□□□□□ -0.02
CLPX-201ENST00000300107 FOXO3O43524 673 aa14.9□□□□□ -0.02
CLPX-201ENST00000300107 IDH1O75874 414 aaKnown RBP14.9□□□□□ -0.02
CLPX-201ENST00000300107 ZSCAN22P10073 491 aaPredicted RBP14.9□□□□□ -0.02
CLPX-201ENST00000300107 SMC5Q8IY18 1101 aa14.9□□□□□ -0.02
CLPX-201ENST00000300107 ZNF397Q8NF99 534 aaPredicted RBP14.9□□□□□ -0.02
CLPX-201ENST00000300107 GOLGA6L9A6NEM1 432 aa14.9□□□□□ -0.02
CLPX-201ENST00000300107 PRIM1P49642 420 aaKnown RBP14.9□□□□□ -0.02
CLPX-201ENST00000300107 MPHOSPH8Q99549 860 aa14.9□□□□□ -0.02
CLPX-201ENST00000300107 MAGI1Q96QZ7 1491 aaPredicted RBP14.9□□□□□ -0.02
CLPX-201ENST00000300107 RAB3GAP1Q15042 981 aa14.9□□□□□ -0.02
CLPX-201ENST00000300107 SPA17Q15506 151 aa14.9□□□□□ -0.02
CLPX-201ENST00000300107 CCDC8Q9H0W5 538 aaPredicted RBP14.9□□□□□ -0.02
CLPX-201ENST00000300107 ABCA10Q8WWZ4 1543 aa14.9□□□□□ -0.02
CLPX-201ENST00000300107 DISP3Q9P2K9 1392 aa14.9□□□□□ -0.02
CLPX-201ENST00000300107 LARP1Q6PKG0 1096 aaKnown RBP14.89□□□□□ -0.03
CLPX-201ENST00000300107 CCDC171Q6TFL3 1326 aa14.89□□□□□ -0.03
CLPX-201ENST00000300107 FLIIQ13045 1269 aa14.89□□□□□ -0.03
CLPX-201ENST00000300107 FAM200AQ8TCP9 573 aa14.89□□□□□ -0.03
CLPX-201ENST00000300107 PPP1R1BQ9UD71 204 aaPredicted RBP14.89□□□□□ -0.03
CLPX-201ENST00000300107 EMILIN1Q9Y6C2 1016 aa14.89□□□□□ -0.03
CLPX-201ENST00000300107 ADGRF5Q8IZF2 1346 aa14.89□□□□□ -0.03
CLPX-201ENST00000300107 POTEB2H3BUK9 544 aa14.89□□□□□ -0.03
CLPX-201ENST00000300107 BIN1O00499 593 aa14.89□□□□□ -0.03
CLPX-201ENST00000300107 CCDC186Q7Z3E2 898 aa14.89□□□□□ -0.03
CLPX-201ENST00000300107 CNNM3Q8NE01 707 aa14.89□□□□□ -0.03
CLPX-201ENST00000300107 DNAAF4Q8WXU2 420 aa14.89□□□□□ -0.03
CLPX-201ENST00000300107 EVI5LQ96CN4 794 aa14.89□□□□□ -0.03
CLPX-201ENST00000300107 FAM107BQ9H098 131 aa14.89□□□□□ -0.03
CLPX-201ENST00000300107 TTC12Q9H892 705 aaPredicted RBP14.89□□□□□ -0.03
CLPX-201ENST00000300107 CCDC85AQ96PX6 553 aaPredicted RBP14.89□□□□□ -0.03
CLPX-201ENST00000300107 SSBP05455 408 aaKnown RBP eCLIP14.88□□□□□ -0.03
CLPX-201ENST00000300107 NME9Q86XW9 330 aa14.88□□□□□ -0.03
CLPX-201ENST00000300107 AIDAQ96BJ3 306 aa14.88□□□□□ -0.03
CLPX-201ENST00000300107 SEPT7Q16181 437 aaKnown RBP14.88□□□□□ -0.03
CLPX-201ENST00000300107 TIGD1Q96MW7 591 aa14.88□□□□□ -0.03
CLPX-201ENST00000300107 ANAPC15P60006 121 aa14.88□□□□□ -0.03
CLPX-201ENST00000300107 ENOX2Q16206 610 aaKnown RBP14.88□□□□□ -0.03
CLPX-201ENST00000300107 SMARCC1Q92922 1105 aaPredicted RBP14.88□□□□□ -0.03
CLPX-201ENST00000300107 POGZQ7Z3K3 1410 aa14.88□□□□□ -0.03
CLPX-201ENST00000300107 CCDC196A0A1B0GTZ2 297 aa14.87□□□□□ -0.03
CLPX-201ENST00000300107 PTCD1O75127 700 aaKnown RBP14.87□□□□□ -0.03
CLPX-201ENST00000300107 USP48Q86UV5 1035 aa14.87□□□□□ -0.03
CLPX-201ENST00000300107 CCDC150Q8NCX0 1101 aa14.87□□□□□ -0.03
CLPX-201ENST00000300107 CPLX3Q8WVH0 158 aa14.87□□□□□ -0.03
CLPX-201ENST00000300107 TSHZ3Q63HK5 1081 aa14.87□□□□□ -0.03
CLPX-201ENST00000300107 GIMAP7Q8NHV1 300 aa14.87□□□□□ -0.03
CLPX-201ENST00000300107 MAPKBP1O60336 1514 aa14.87□□□□□ -0.03
CLPX-201ENST00000300107 IFIT1P09914 478 aaKnown RBP14.87□□□□□ -0.03
CLPX-201ENST00000300107 CCT2P78371 535 aaKnown RBP14.87□□□□□ -0.03
CLPX-201ENST00000300107 SCAF11Q99590 1463 aaKnown RBP14.87□□□□□ -0.03
CLPX-201ENST00000300107 NSD2O96028 1365 aa14.87□□□□□ -0.03
CLPX-201ENST00000300107 SKILP12757 684 aa14.86□□□□□ -0.03
CLPX-201ENST00000300107 PAFAH1B1P43034 410 aa14.86□□□□□ -0.03
CLPX-201ENST00000300107 GNG11P61952 73 aa14.86□□□□□ -0.03
CLPX-201ENST00000300107 USHBP1Q8N6Y0 703 aa14.86□□□□□ -0.03
CLPX-201ENST00000300107 MBIPQ9NS73 344 aa14.86□□□□□ -0.03
CLPX-201ENST00000300107 RAI14Q9P0K7 980 aa14.86□□□□□ -0.03
CLPX-201ENST00000300107 ZRSR2Q15696 482 aaKnown RBP14.86□□□□□ -0.03
CLPX-201ENST00000300107 CAMSAP2Q08AD1 1489 aa14.86□□□□□ -0.03
CLPX-201ENST00000300107 LMAN1P49257 510 aa14.86□□□□□ -0.03
CLPX-201ENST00000300107 SEC24BO95487 1268 aa14.86□□□□□ -0.03
CLPX-201ENST00000300107 ZSCAN16Q9H4T2 348 aaPredicted RBP14.86□□□□□ -0.03
CLPX-201ENST00000300107 FBXO3Q9UK99 471 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms