RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 HELBQ8NG08 1087 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-201ENST00000299267 IFIT1P09914 478 aaKnown RBP12.24□□□□□ -0.45
GABRB3-201ENST00000299267 ATP2B1P20020 1258 aa12.24□□□□□ -0.45
GABRB3-201ENST00000299267 DRC7Q8IY82 874 aa12.24□□□□□ -0.45
GABRB3-201ENST00000299267 ARHGAP45Q92619 1136 aa12.24□□□□□ -0.45
GABRB3-201ENST00000299267 GNL3LQ9NVN8 582 aaKnown RBP12.24□□□□□ -0.45
GABRB3-201ENST00000299267 NIP7Q9Y221 180 aaKnown RBP eCLIP12.24□□□□□ -0.45
GABRB3-201ENST00000299267 KIF3AQ9Y496 699 aa12.24□□□□□ -0.45
GABRB3-201ENST00000299267 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
GABRB3-201ENST00000299267 KLHDC4Q8TBB5 520 aa12.24□□□□□ -0.45
GABRB3-201ENST00000299267 RNF17Q9BXT8 1623 aaKnown RBP12.24□□□□□ -0.45
GABRB3-201ENST00000299267 ERICH2A1L162 156 aa12.24□□□□□ -0.45
GABRB3-201ENST00000299267 MARCH6O60337 910 aa12.24□□□□□ -0.45
GABRB3-201ENST00000299267 FAM89AQ96GI7 184 aa12.24□□□□□ -0.45
GABRB3-201ENST00000299267 USP16Q9Y5T5 823 aa12.24□□□□□ -0.45
GABRB3-201ENST00000299267 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
GABRB3-201ENST00000299267 RBM5P52756 815 aaKnown RBP eCLIP12.23□□□□□ -0.45
GABRB3-201ENST00000299267 DZIP3Q86Y13 1208 aaKnown RBP12.23□□□□□ -0.45
GABRB3-201ENST00000299267 KCNQ4P56696 695 aa12.23□□□□□ -0.45
GABRB3-201ENST00000299267 BRINP3Q76B58 766 aa12.23□□□□□ -0.45
GABRB3-201ENST00000299267 CHMP5Q9NZZ3 219 aa12.23□□□□□ -0.45
GABRB3-201ENST00000299267 PCDH11XQ9BZA7 1347 aa12.23□□□□□ -0.45
GABRB3-201ENST00000299267 PCDH11YQ9BZA8 1340 aa12.23□□□□□ -0.45
GABRB3-201ENST00000299267 ANKRD18BA2A2Z9 1011 aa12.23□□□□□ -0.45
GABRB3-201ENST00000299267 NBPF5PQ86XG9 351 aaPredicted RBP12.23□□□□□ -0.45
GABRB3-201ENST00000299267 USP21Q9UK80 565 aa12.23□□□□□ -0.45
GABRB3-201ENST00000299267 ATP2B2Q01814 1243 aa12.23□□□□□ -0.45
GABRB3-201ENST00000299267 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
GABRB3-201ENST00000299267 RHPN1Q8TCX5 695 aa12.23□□□□□ -0.45
GABRB3-201ENST00000299267 CLSTN1O94985 981 aa12.22□□□□□ -0.45
GABRB3-201ENST00000299267 HSP90AB3PQ58FF7 597 aa12.22□□□□□ -0.45
GABRB3-201ENST00000299267 USP6P35125 1406 aa12.22□□□□□ -0.45
GABRB3-201ENST00000299267 LINS1Q8NG48 757 aa12.22□□□□□ -0.45
GABRB3-201ENST00000299267 SLC52A2Q9HAB3 445 aa12.22□□□□□ -0.45
GABRB3-201ENST00000299267 AXIN2Q9Y2T1 843 aa12.22□□□□□ -0.45
GABRB3-201ENST00000299267 GOLIM4O00461 696 aa12.22□□□□□ -0.45
GABRB3-201ENST00000299267 JAKMIP1Q96N16 626 aaKnown RBP12.22□□□□□ -0.45
GABRB3-201ENST00000299267 DDX21Q9NR30 783 aaKnown RBP eCLIP12.22□□□□□ -0.45
GABRB3-201ENST00000299267 ZBTB40Q9NUA8 1239 aa12.22□□□□□ -0.45
GABRB3-201ENST00000299267 CDK11BP21127 795 aaKnown RBP12.21□□□□□ -0.45
GABRB3-201ENST00000299267 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.21□□□□□ -0.45
GABRB3-201ENST00000299267 USP19O94966 1318 aa12.21□□□□□ -0.45
GABRB3-201ENST00000299267 ANKRD44Q8N8A2 993 aa12.21□□□□□ -0.45
GABRB3-201ENST00000299267 PLEKHF1Q96S99 279 aa12.21□□□□□ -0.45
GABRB3-201ENST00000299267 PRAMEF22A3QJZ6 481 aa12.21□□□□□ -0.46
GABRB3-201ENST00000299267 C6orf229H3BNL8 230 aa12.21□□□□□ -0.46
GABRB3-201ENST00000299267 RAB11FIP3O75154 756 aa12.21□□□□□ -0.46
GABRB3-201ENST00000299267 DDX46Q7L014 1031 aaKnown RBP12.21□□□□□ -0.46
GABRB3-201ENST00000299267 ARHGEF10O15013 1369 aa12.21□□□□□ -0.46
GABRB3-201ENST00000299267 MAP3K4Q9Y6R4 1608 aa12.21□□□□□ -0.46
GABRB3-201ENST00000299267 CEP152O94986 1710 aa12.21□□□□□ -0.46
GABRB3-201ENST00000299267 PPFIA3O75145 1194 aa12.21□□□□□ -0.46
GABRB3-201ENST00000299267 PRPF40BQ6NWY9 871 aaKnown RBP12.21□□□□□ -0.46
GABRB3-201ENST00000299267 SLC4A8Q2Y0W8 1093 aa12.2□□□□□ -0.46
GABRB3-201ENST00000299267 HIP1O00291 1037 aa12.2□□□□□ -0.46
GABRB3-201ENST00000299267 NBPF7P0C2Y1 421 aaPredicted RBP12.2□□□□□ -0.46
GABRB3-201ENST00000299267 TRIM29Q14134 588 aa12.2□□□□□ -0.46
GABRB3-201ENST00000299267 GNPATO15228 680 aa12.2□□□□□ -0.46
GABRB3-201ENST00000299267 PSMA5P28066 241 aa12.2□□□□□ -0.46
GABRB3-201ENST00000299267 EIF4A1P60842 406 aaKnown RBP12.2□□□□□ -0.46
GABRB3-201ENST00000299267 ECHDC1Q9NTX5 307 aa12.2□□□□□ -0.46
GABRB3-201ENST00000299267 KDM5AP29375 1690 aaKnown RBP12.2□□□□□ -0.46
GABRB3-201ENST00000299267 ZBTB7BO15156 539 aaPredicted RBP12.19□□□□□ -0.46
GABRB3-201ENST00000299267 TDO2P48775 406 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 CEBPZQ03701 1054 aaKnown RBP12.19□□□□□ -0.46
GABRB3-201ENST00000299267 PIBF1Q8WXW3 757 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 TFCP2L1Q9NZI6 479 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 DIP2CQ9Y2E4 1556 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 HCLS1P14317 486 aaPredicted RBP12.19□□□□□ -0.46
GABRB3-201ENST00000299267 CEP85Q6P2H3 762 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 TBC1D9Q6ZT07 1266 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 RPGRQ92834 1020 aaKnown RBP12.19□□□□□ -0.46
GABRB3-201ENST00000299267 ZNF622Q969S3 477 aaKnown RBP eCLIP12.19□□□□□ -0.46
GABRB3-201ENST00000299267 SETDB2Q96T68 719 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 CYP46A1Q9Y6A2 500 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 PHKG2P15735 406 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 RABEP1Q15276 862 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 OTUD7AQ8TE49 926 aaPredicted RBP12.19□□□□□ -0.46
GABRB3-201ENST00000299267 E9PCH4 1651 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 INSRP06213 1382 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 MINDY4BA8MYZ0 360 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 ATP8B2P98198 1209 aa12.19□□□□□ -0.46
GABRB3-201ENST00000299267 NFKBIBQ15653 356 aa12.18□□□□□ -0.46
GABRB3-201ENST00000299267 ZSCAN29Q8IWY8 852 aaPredicted RBP12.18□□□□□ -0.46
GABRB3-201ENST00000299267 AIDAQ96BJ3 306 aa12.18□□□□□ -0.46
GABRB3-201ENST00000299267 AKAP2Q9Y2D5 859 aa12.18□□□□□ -0.46
GABRB3-201ENST00000299267 IKQ13123 557 aaPredicted RBP12.18□□□□□ -0.46
GABRB3-201ENST00000299267 BICC1Q9H694 974 aaKnown RBP12.18□□□□□ -0.46
GABRB3-201ENST00000299267 BLOC1S2Q6QNY1 142 aa12.18□□□□□ -0.46
GABRB3-201ENST00000299267 ASAP1Q9ULH1 1129 aa12.18□□□□□ -0.46
GABRB3-201ENST00000299267 UNC13BO14795 1591 aa12.18□□□□□ -0.46
GABRB3-201ENST00000299267 SDSP20132 328 aa12.17□□□□□ -0.46
GABRB3-201ENST00000299267 CASTP20810 708 aaKnown RBP12.17□□□□□ -0.46
GABRB3-201ENST00000299267 NUCB1Q02818 461 aa12.17□□□□□ -0.46
GABRB3-201ENST00000299267 HDAC1Q13547 482 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-201ENST00000299267 NUP133Q8WUM0 1156 aa12.17□□□□□ -0.46
GABRB3-201ENST00000299267 SYAP1Q96A49 352 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-201ENST00000299267 JAG2Q9Y219 1238 aa12.17□□□□□ -0.46
GABRB3-201ENST00000299267 GOLGA6L3A6NEY3 463 aa12.17□□□□□ -0.46
GABRB3-201ENST00000299267 CAVIN4Q5BKX8 364 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms