RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 ATP8B2P98198 1209 aa17.27■□□□□ 0.36
KDM1B-201ENST00000297792 PRPF40BQ6NWY9 871 aaKnown RBP17.27■□□□□ 0.36
KDM1B-201ENST00000297792 FAM173BQ6P4H8 233 aa17.27■□□□□ 0.36
KDM1B-201ENST00000297792 JAKMIP1Q96N16 626 aaKnown RBP17.27■□□□□ 0.36
KDM1B-201ENST00000297792 FOSBP53539 338 aa17.27■□□□□ 0.36
KDM1B-201ENST00000297792 LMOD2Q6P5Q4 547 aa17.27■□□□□ 0.36
KDM1B-201ENST00000297792 RGS12O14924 1447 aa17.27■□□□□ 0.35
KDM1B-201ENST00000297792 ZNF500O60304 480 aaPredicted RBP17.27■□□□□ 0.35
KDM1B-201ENST00000297792 SASS6Q6UVJ0 657 aa17.26■□□□□ 0.35
KDM1B-201ENST00000297792 RASEFQ8IZ41 740 aa17.26■□□□□ 0.35
KDM1B-201ENST00000297792 DNM1Q05193 864 aaKnown RBP17.26■□□□□ 0.35
KDM1B-201ENST00000297792 STK3Q13188 491 aa17.26■□□□□ 0.35
KDM1B-201ENST00000297792 TMEM2Q9UHN6 1383 aa17.26■□□□□ 0.35
KDM1B-201ENST00000297792 GOLGA6L4A6NEF3 574 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 TAF7Q15545 349 aaPredicted RBP17.25■□□□□ 0.35
KDM1B-201ENST00000297792 HS1BP3Q53T59 392 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 STX6O43752 255 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 SYT1P21579 422 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 GNAT3A8MTJ3 354 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 NBPF7P0C2Y1 421 aaPredicted RBP17.25■□□□□ 0.35
KDM1B-201ENST00000297792 CNTROBQ8N137 903 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 ABTB2Q8N961 1025 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 RHPN1Q8TCX5 695 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 DLC1Q96QB1 1528 aa17.25■□□□□ 0.35
KDM1B-201ENST00000297792 USP44Q9H0E7 712 aa17.24■□□□□ 0.35
KDM1B-201ENST00000297792 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
KDM1B-201ENST00000297792 SIL1Q9H173 461 aa17.24■□□□□ 0.35
KDM1B-201ENST00000297792 KIF24Q5T7B8 1368 aa17.23■□□□□ 0.35
KDM1B-201ENST00000297792 GJB2P29033 226 aa17.23■□□□□ 0.35
KDM1B-201ENST00000297792 AIMP1Q12904 312 aaKnown RBP17.23■□□□□ 0.35
KDM1B-201ENST00000297792 PA2G4Q9UQ80 394 aaKnown RBP17.23■□□□□ 0.35
KDM1B-201ENST00000297792 RIMS1Q86UR5 1692 aaKnown RBP17.23■□□□□ 0.35
KDM1B-201ENST00000297792 LARGE1O95461 756 aa17.23■□□□□ 0.35
KDM1B-201ENST00000297792 OSBPL3Q9H4L5 887 aa17.23■□□□□ 0.35
KDM1B-201ENST00000297792 C9orf78Q9NZ63 289 aaPredicted RBP17.23■□□□□ 0.35
KDM1B-201ENST00000297792 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
KDM1B-201ENST00000297792 SNX14Q9Y5W7 946 aa17.23■□□□□ 0.35
KDM1B-201ENST00000297792 EID1Q9Y6B2 187 aa17.23■□□□□ 0.35
KDM1B-201ENST00000297792 PI4KAP2A4QPH2 592 aa17.23■□□□□ 0.35
KDM1B-201ENST00000297792 ZSCAN22P10073 491 aaPredicted RBP17.23■□□□□ 0.35
KDM1B-201ENST00000297792 CKAP2LQ8IYA6 745 aa17.23■□□□□ 0.35
KDM1B-201ENST00000297792 PI4KAP1Q8N8J0 262 aa17.23■□□□□ 0.35
KDM1B-201ENST00000297792 CDC42BPGQ6DT37 1551 aa17.22■□□□□ 0.35
KDM1B-201ENST00000297792 PPFIA3O75145 1194 aa17.22■□□□□ 0.35
KDM1B-201ENST00000297792 CUL4AQ13619 759 aa17.22■□□□□ 0.35
KDM1B-201ENST00000297792 NOLC1Q14978 699 aaKnown RBP eCLIP17.22■□□□□ 0.35
KDM1B-201ENST00000297792 FBXW7Q969H0 707 aa17.22■□□□□ 0.35
KDM1B-201ENST00000297792 ZHX1Q9UKY1 873 aaPredicted RBP17.22■□□□□ 0.35
KDM1B-201ENST00000297792 NRXN3Q9Y4C0 1643 aa17.22■□□□□ 0.35
KDM1B-201ENST00000297792 CBX1P83916 185 aa17.22■□□□□ 0.35
KDM1B-201ENST00000297792 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.22■□□□□ 0.35
KDM1B-201ENST00000297792 KIAA0232Q92628 1395 aa17.22■□□□□ 0.35
KDM1B-201ENST00000297792 SETD1BQ9UPS6 1966 aaKnown RBP17.22■□□□□ 0.35
KDM1B-201ENST00000297792 IFIT2P09913 472 aaKnown RBP17.21■□□□□ 0.35
KDM1B-201ENST00000297792 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
KDM1B-201ENST00000297792 USP6P35125 1406 aa17.21■□□□□ 0.35
KDM1B-201ENST00000297792 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
KDM1B-201ENST00000297792 INTS4Q96HW7 963 aaKnown RBP17.21■□□□□ 0.35
KDM1B-201ENST00000297792 PDRG1Q9NUG6 133 aa17.21■□□□□ 0.35
KDM1B-201ENST00000297792 CHPF2Q9P2E5 772 aa17.21■□□□□ 0.35
KDM1B-201ENST00000297792 TFIP11Q9UBB9 837 aaKnown RBP17.21■□□□□ 0.35
KDM1B-201ENST00000297792 SOS1Q07889 1333 aaPredicted RBP17.21■□□□□ 0.35
KDM1B-201ENST00000297792 CEBPZQ03701 1054 aaKnown RBP17.21■□□□□ 0.35
KDM1B-201ENST00000297792 PPP6R1Q9UPN7 881 aa17.21■□□□□ 0.35
KDM1B-201ENST00000297792 ANAPC15P60006 121 aa17.2■□□□□ 0.34
KDM1B-201ENST00000297792 PLEKHG3A1L390 1219 aa17.2■□□□□ 0.34
KDM1B-201ENST00000297792 KCNQ3O43525 872 aa17.2■□□□□ 0.34
KDM1B-201ENST00000297792 KCNA6P17658 529 aa17.2■□□□□ 0.34
KDM1B-201ENST00000297792 RUFY3Q7L099 469 aa17.2■□□□□ 0.34
KDM1B-201ENST00000297792 DIP2BQ9P265 1576 aa17.2■□□□□ 0.34
KDM1B-201ENST00000297792 SPATA31D1Q6ZQQ2 1576 aa17.2■□□□□ 0.34
KDM1B-201ENST00000297792 ADAMTS13Q76LX8 1427 aa17.2■□□□□ 0.34
KDM1B-201ENST00000297792 PTPRUQ92729 1446 aa17.2■□□□□ 0.34
KDM1B-201ENST00000297792 HSPA4P34932 840 aa17.2■□□□□ 0.34
KDM1B-201ENST00000297792 ADCK5Q3MIX3 580 aa17.19■□□□□ 0.34
KDM1B-201ENST00000297792 CRB1P82279 1406 aa17.19■□□□□ 0.34
KDM1B-201ENST00000297792 DYNC1I1O14576 645 aa17.19■□□□□ 0.34
KDM1B-201ENST00000297792 F13A1P00488 732 aa17.19■□□□□ 0.34
KDM1B-201ENST00000297792 CLASRPQ8N2M8 674 aaKnown RBP17.19■□□□□ 0.34
KDM1B-201ENST00000297792 SPDYE4A6NLX3 237 aa17.19■□□□□ 0.34
KDM1B-201ENST00000297792 CHAF1AQ13111 956 aaPredicted RBP17.19■□□□□ 0.34
KDM1B-201ENST00000297792 CCDC8Q9H0W5 538 aaPredicted RBP17.19■□□□□ 0.34
KDM1B-201ENST00000297792 FGD1P98174 961 aa17.18■□□□□ 0.34
KDM1B-201ENST00000297792 KIF1BPQ96EK5 621 aa17.18■□□□□ 0.34
KDM1B-201ENST00000297792 LGR6Q9HBX8 967 aa17.18■□□□□ 0.34
KDM1B-201ENST00000297792 ATP6V1DQ9Y5K8 247 aa17.18■□□□□ 0.34
KDM1B-201ENST00000297792 MCM5P33992 734 aa17.18■□□□□ 0.34
KDM1B-201ENST00000297792 PTH1RQ03431 593 aa17.18■□□□□ 0.34
KDM1B-201ENST00000297792 TEFQ10587 303 aa17.18■□□□□ 0.34
KDM1B-201ENST00000297792 LARP1BQ659C4 914 aaKnown RBP17.18■□□□□ 0.34
KDM1B-201ENST00000297792 AACSQ86V21 672 aa17.18■□□□□ 0.34
KDM1B-201ENST00000297792 SGSM2O43147 1006 aa17.18■□□□□ 0.34
KDM1B-201ENST00000297792 UBE2HP62256 183 aa17.18■□□□□ 0.34
KDM1B-201ENST00000297792 LRRC59Q96AG4 307 aaKnown RBP17.18■□□□□ 0.34
KDM1B-201ENST00000297792 ZNF592Q92610 1267 aa17.17■□□□□ 0.34
KDM1B-201ENST00000297792 ZKSCAN1P17029 563 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms