RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 NBPF7P0C2Y1 421 aaPredicted RBP20.25■□□□□ 0.83
RPN1-201ENST00000296255 EIF2S2P20042 333 aaKnown RBP20.25■□□□□ 0.83
RPN1-201ENST00000296255 EIF4A1P60842 406 aaKnown RBP20.25■□□□□ 0.83
RPN1-201ENST00000296255 PI4K2BQ8TCG2 481 aa20.25■□□□□ 0.83
RPN1-201ENST00000296255 INTS4Q96HW7 963 aaKnown RBP20.25■□□□□ 0.83
RPN1-201ENST00000296255 RAB11FIP3O75154 756 aa20.24■□□□□ 0.83
RPN1-201ENST00000296255 C14orf37Q86TY3 774 aa20.24■□□□□ 0.83
RPN1-201ENST00000296255 NBPF6Q5VWK0 638 aa20.24■□□□□ 0.83
RPN1-201ENST00000296255 RHPN1Q8TCX5 695 aa20.24■□□□□ 0.83
RPN1-201ENST00000296255 ANP32BQ92688 251 aaKnown RBP20.24■□□□□ 0.83
RPN1-201ENST00000296255 NBPF4Q96M43 638 aa20.24■□□□□ 0.83
RPN1-201ENST00000296255 KCNQ3O43525 872 aa20.23■□□□□ 0.83
RPN1-201ENST00000296255 HSPA4P34932 840 aa20.23■□□□□ 0.83
RPN1-201ENST00000296255 CHPF2Q9P2E5 772 aa20.23■□□□□ 0.83
RPN1-201ENST00000296255 FER1L4A9Z1Z3 1794 aa20.23■□□□□ 0.83
RPN1-201ENST00000296255 IP6K1Q92551 441 aa20.22■□□□□ 0.83
RPN1-201ENST00000296255 KDM3BQ7LBC6 1761 aa20.22■□□□□ 0.83
RPN1-201ENST00000296255 SRGAP3O43295 1099 aa20.22■□□□□ 0.83
RPN1-201ENST00000296255 BEND3Q5T5X7 828 aa20.22■□□□□ 0.83
RPN1-201ENST00000296255 NFAT5O94916 1531 aa20.21■□□□□ 0.83
RPN1-201ENST00000296255 PHF8Q9UPP1 1060 aa20.21■□□□□ 0.83
RPN1-201ENST00000296255 SYCE3A1L190 88 aa20.2■□□□□ 0.82
RPN1-201ENST00000296255 PI4KAP2A4QPH2 592 aa20.2■□□□□ 0.82
RPN1-201ENST00000296255 EPB41L2O43491 1005 aaKnown RBP20.2■□□□□ 0.82
RPN1-201ENST00000296255 LRSAM1Q6UWE0 723 aa20.2■□□□□ 0.82
RPN1-201ENST00000296255 ZSCAN30Q86W11 494 aa20.2■□□□□ 0.82
RPN1-201ENST00000296255 PI4KAP1Q8N8J0 262 aa20.2■□□□□ 0.82
RPN1-201ENST00000296255 SETD1BQ9UPS6 1966 aaKnown RBP20.2■□□□□ 0.82
RPN1-201ENST00000296255 DNAAF4Q8WXU2 420 aa20.2■□□□□ 0.82
RPN1-201ENST00000296255 SGSM2O43147 1006 aa20.19■□□□□ 0.82
RPN1-201ENST00000296255 ANXA1P04083 346 aa20.19■□□□□ 0.82
RPN1-201ENST00000296255 KIF1BPQ96EK5 621 aa20.19■□□□□ 0.82
RPN1-201ENST00000296255 PDLIM2Q96JY6 352 aa20.19■□□□□ 0.82
RPN1-201ENST00000296255 RGPD2P0DJD1 1756 aa20.19■□□□□ 0.82
RPN1-201ENST00000296255 HOXB7P09629 217 aa20.19■□□□□ 0.82
RPN1-201ENST00000296255 RAD50Q92878 1312 aa20.18■□□□□ 0.82
RPN1-201ENST00000296255 ADCY9O60503 1353 aa20.18■□□□□ 0.82
RPN1-201ENST00000296255 MBD3O95983 291 aa20.18■□□□□ 0.82
RPN1-201ENST00000296255 PLEKHG5O94827 1062 aa20.17■□□□□ 0.82
RPN1-201ENST00000296255 LSG1Q9H089 658 aaKnown RBP20.17■□□□□ 0.82
RPN1-201ENST00000296255 SNX14Q9Y5W7 946 aa20.17■□□□□ 0.82
RPN1-201ENST00000296255 CRYBG1Q9Y4K1 1723 aa20.17■□□□□ 0.82
RPN1-201ENST00000296255 RBM33Q96EV2 1170 aaKnown RBP20.16■□□□□ 0.82
RPN1-201ENST00000296255 LMO7Q8WWI1 1683 aa20.16■□□□□ 0.82
RPN1-201ENST00000296255 LRRC59Q96AG4 307 aaKnown RBP20.16■□□□□ 0.82
RPN1-201ENST00000296255 RASEFQ8IZ41 740 aa20.15■□□□□ 0.82
RPN1-201ENST00000296255 FOXD4L6Q3SYB3 417 aaPredicted RBP20.15■□□□□ 0.82
RPN1-201ENST00000296255 FOXD4L3Q6VB84 417 aaPredicted RBP20.15■□□□□ 0.82
RPN1-201ENST00000296255 MPRIPQ6WCQ1 1025 aa20.15■□□□□ 0.82
RPN1-201ENST00000296255 TTC14Q96N46 770 aa20.15■□□□□ 0.82
RPN1-201ENST00000296255 ZBTB7CA1YPR0 619 aa20.14■□□□□ 0.82
RPN1-201ENST00000296255 BTBD11A6QL63 1104 aa20.14■□□□□ 0.82
RPN1-201ENST00000296255 CNTROBQ8N137 903 aa20.14■□□□□ 0.82
RPN1-201ENST00000296255 USP42Q9H9J4 1324 aaKnown RBP20.14■□□□□ 0.81
RPN1-201ENST00000296255 RPAP1Q9BWH6 1393 aaPredicted RBP20.14■□□□□ 0.81
RPN1-201ENST00000296255 GADD45BO75293 160 aaPredicted RBP20.14■□□□□ 0.81
RPN1-201ENST00000296255 HS1BP3Q53T59 392 aa20.14■□□□□ 0.81
RPN1-201ENST00000296255 ZNF530Q6P9A1 599 aaPredicted RBP20.14■□□□□ 0.81
RPN1-201ENST00000296255 GDPD2Q9HCC8 539 aa20.14■□□□□ 0.81
RPN1-201ENST00000296255 TEFQ10587 303 aa20.13■□□□□ 0.81
RPN1-201ENST00000296255 AKAP4Q5JQC9 854 aa20.13■□□□□ 0.81
RPN1-201ENST00000296255 WDR33Q9C0J8 1336 aaKnown RBP20.13■□□□□ 0.81
RPN1-201ENST00000296255 PRKCSHP14314 528 aaPredicted RBP20.13■□□□□ 0.81
RPN1-201ENST00000296255 CWC27Q6UX04 472 aaKnown RBP20.13■□□□□ 0.81
RPN1-201ENST00000296255 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.13■□□□□ 0.81
RPN1-201ENST00000296255 SPG7Q9UQ90 795 aa20.13■□□□□ 0.81
RPN1-201ENST00000296255 CHD2O14647 1828 aaKnown RBP20.12■□□□□ 0.81
RPN1-201ENST00000296255 MTX1Q13505 466 aa20.11■□□□□ 0.81
RPN1-201ENST00000296255 HSP90AB4PQ58FF6 505 aa20.11■□□□□ 0.81
RPN1-201ENST00000296255 LARP6Q9BRS8 491 aaKnown RBP20.11■□□□□ 0.81
RPN1-201ENST00000296255 PXDNQ92626 1479 aa20.11■□□□□ 0.81
RPN1-201ENST00000296255 MSNP26038 577 aaKnown RBP20.11■□□□□ 0.81
RPN1-201ENST00000296255 AK2P54819 239 aa20.11■□□□□ 0.81
RPN1-201ENST00000296255 PROSER3Q2NL68 480 aa20.11■□□□□ 0.81
RPN1-201ENST00000296255 RUFY3Q7L099 469 aa20.11■□□□□ 0.81
RPN1-201ENST00000296255 USP48Q86UV5 1035 aa20.11■□□□□ 0.81
RPN1-201ENST00000296255 PHRF1Q9P1Y6 1649 aaKnown RBP20.11■□□□□ 0.81
RPN1-201ENST00000296255 TTC41PQ6P2S7 1318 aa20.11■□□□□ 0.81
RPN1-201ENST00000296255 TCHHQ07283 1943 aa20.1■□□□□ 0.81
RPN1-201ENST00000296255 NOL7Q9UMY1 257 aaKnown RBP20.1■□□□□ 0.81
RPN1-201ENST00000296255 PSME1Q06323 249 aa20.1■□□□□ 0.81
RPN1-201ENST00000296255 OS9Q13438 667 aaPredicted RBP20.1■□□□□ 0.81
RPN1-201ENST00000296255 RNF214Q8ND24 703 aa20.1■□□□□ 0.81
RPN1-201ENST00000296255 CHMP4AQ9BY43 222 aa20.1■□□□□ 0.81
RPN1-201ENST00000296255 DBF4Q9UBU7 674 aaPredicted RBP20.1■□□□□ 0.81
RPN1-201ENST00000296255 MAP3K2Q9Y2U5 619 aa20.1■□□□□ 0.81
RPN1-201ENST00000296255 RNMTO43148 476 aaKnown RBP20.09■□□□□ 0.81
RPN1-201ENST00000296255 GLRX3O76003 335 aaKnown RBP20.09■□□□□ 0.81
RPN1-201ENST00000296255 PLEKHO1Q53GL0 409 aaPredicted RBP20.09■□□□□ 0.81
RPN1-201ENST00000296255 ESCO1Q5FWF5 840 aa20.09■□□□□ 0.81
RPN1-201ENST00000296255 OFD1O75665 1012 aa20.09■□□□□ 0.81
RPN1-201ENST00000296255 CPA1P15085 419 aa20.09■□□□□ 0.81
RPN1-201ENST00000296255 KCNH5Q8NCM2 988 aa20.09■□□□□ 0.81
RPN1-201ENST00000296255 PRAMEF22A3QJZ6 481 aa20.08■□□□□ 0.81
RPN1-201ENST00000296255 KIAA1211Q6ZU35 1233 aa20.08■□□□□ 0.81
RPN1-201ENST00000296255 LIMCH1Q9UPQ0 1083 aa20.08■□□□□ 0.81
RPN1-201ENST00000296255 PA2G4Q9UQ80 394 aaKnown RBP20.08■□□□□ 0.81
RPN1-201ENST00000296255 ADGRL3Q9HAR2 1447 aa20.08■□□□□ 0.8
RPN1-201ENST00000296255 GIGYF1O75420 1035 aaPredicted RBP20.08■□□□□ 0.8
RPN1-201ENST00000296255 PTH1RQ03431 593 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms