RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 NBPF6Q5VWK0 638 aa11.58□□□□□ -0.56
CLRN1-201ENST00000295911 BBXQ8WY36 941 aaPredicted RBP11.58□□□□□ -0.56
CLRN1-201ENST00000295911 NBPF4Q96M43 638 aa11.58□□□□□ -0.56
CLRN1-201ENST00000295911 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
CLRN1-201ENST00000295911 OVOS2A0A0G2JMS6 1433 aa11.58□□□□□ -0.56
CLRN1-201ENST00000295911 CEMIPQ8WUJ3 1361 aa11.57□□□□□ -0.56
CLRN1-201ENST00000295911 EIF5BO60841 1220 aaKnown RBP11.57□□□□□ -0.56
CLRN1-201ENST00000295911 AKAP4Q5JQC9 854 aa11.57□□□□□ -0.56
CLRN1-201ENST00000295911 ANKRD45Q5TZF3 282 aa11.57□□□□□ -0.56
CLRN1-201ENST00000295911 CADPS2Q86UW7 1296 aa11.57□□□□□ -0.56
CLRN1-201ENST00000295911 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
CLRN1-201ENST00000295911 MED1Q15648 1581 aaPredicted RBP11.57□□□□□ -0.56
CLRN1-201ENST00000295911 HOXB7P09629 217 aa11.56□□□□□ -0.56
CLRN1-201ENST00000295911 BECN1Q14457 450 aa11.56□□□□□ -0.56
CLRN1-201ENST00000295911 LMOD2Q6P5Q4 547 aa11.56□□□□□ -0.56
CLRN1-201ENST00000295911 ANKRD44Q8N8A2 993 aa11.56□□□□□ -0.56
CLRN1-201ENST00000295911 ABCC6O95255 1503 aa11.56□□□□□ -0.56
CLRN1-201ENST00000295911 TMEM94Q12767 1356 aa11.56□□□□□ -0.56
CLRN1-201ENST00000295911 LMTK3Q96Q04 1460 aa11.55□□□□□ -0.56
CLRN1-201ENST00000295911 CRYBG1Q9Y4K1 1723 aa11.55□□□□□ -0.56
CLRN1-201ENST00000295911 XIRP1Q702N8 1843 aaKnown RBP11.55□□□□□ -0.56
CLRN1-201ENST00000295911 ZBTB7CA1YPR0 619 aa11.55□□□□□ -0.56
CLRN1-201ENST00000295911 SIRT2Q8IXJ6 389 aa11.55□□□□□ -0.56
CLRN1-201ENST00000295911 USHBP1Q8N6Y0 703 aa11.55□□□□□ -0.56
CLRN1-201ENST00000295911 ANKRD24Q8TF21 1146 aa11.55□□□□□ -0.56
CLRN1-201ENST00000295911 LNPKQ9C0E8 428 aa11.55□□□□□ -0.56
CLRN1-201ENST00000295911 DCTPP1Q9H773 170 aa11.55□□□□□ -0.56
CLRN1-201ENST00000295911 C1orf115Q9H7X2 142 aa11.55□□□□□ -0.56
CLRN1-201ENST00000295911 SIPA1L3O60292 1781 aaPredicted RBP11.55□□□□□ -0.56
CLRN1-201ENST00000295911 G3V3G9 751 aa11.54□□□□□ -0.56
CLRN1-201ENST00000295911 HMMRO75330 724 aa11.54□□□□□ -0.56
CLRN1-201ENST00000295911 XPCQ01831 940 aaPredicted RBP11.54□□□□□ -0.56
CLRN1-201ENST00000295911 BMP2KLQ5H9B9 411 aa11.54□□□□□ -0.56
CLRN1-201ENST00000295911 C1orf141Q5JVX7 400 aa11.54□□□□□ -0.56
CLRN1-201ENST00000295911 TBC1D32Q96NH3 1257 aa11.54□□□□□ -0.56
CLRN1-201ENST00000295911 BCL11BQ9C0K0 894 aaPredicted RBP11.54□□□□□ -0.56
CLRN1-201ENST00000295911 PLEKHG2Q9H7P9 1386 aa11.54□□□□□ -0.56
CLRN1-201ENST00000295911 PXDNLA1KZ92 1463 aa11.54□□□□□ -0.56
CLRN1-201ENST00000295911 NPHP3Q7Z494 1330 aa11.54□□□□□ -0.56
CLRN1-201ENST00000295911 COL18A1P39060 1754 aa11.54□□□□□ -0.56
CLRN1-201ENST00000295911 SNPHO15079 494 aa11.53□□□□□ -0.56
CLRN1-201ENST00000295911 TEFQ10587 303 aa11.53□□□□□ -0.56
CLRN1-201ENST00000295911 ZNF530Q6P9A1 599 aaPredicted RBP11.53□□□□□ -0.56
CLRN1-201ENST00000295911 MS4A4AQ96JQ5 239 aa11.53□□□□□ -0.56
CLRN1-201ENST00000295911 ADAMTS7Q9UKP4 1686 aa11.53□□□□□ -0.56
CLRN1-201ENST00000295911 GNAI3P08754 354 aa11.52□□□□□ -0.56
CLRN1-201ENST00000295911 FLIIQ13045 1269 aa11.52□□□□□ -0.56
CLRN1-201ENST00000295911 CEP85Q6P2H3 762 aa11.52□□□□□ -0.56
CLRN1-201ENST00000295911 G2E3Q7L622 706 aa11.52□□□□□ -0.56
CLRN1-201ENST00000295911 LRRC59Q96AG4 307 aaKnown RBP11.52□□□□□ -0.56
CLRN1-201ENST00000295911 TMEM121BQ9BXQ6 578 aaPredicted RBP11.52□□□□□ -0.56
CLRN1-201ENST00000295911 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.52□□□□□ -0.56
CLRN1-201ENST00000295911 USP35Q9P2H5 1018 aa11.52□□□□□ -0.56
CLRN1-201ENST00000295911 SCN11AQ9UI33 1791 aa11.52□□□□□ -0.56
CLRN1-201ENST00000295911 ATP10DQ9P241 1426 aa11.52□□□□□ -0.57
CLRN1-201ENST00000295911 FKBP5Q13451 457 aaPredicted RBP11.52□□□□□ -0.57
CLRN1-201ENST00000295911 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
CLRN1-201ENST00000295911 SLC4A10Q6U841 1118 aa11.52□□□□□ -0.57
CLRN1-201ENST00000295911 PCDH10Q9P2E7 1040 aa11.52□□□□□ -0.57
CLRN1-201ENST00000295911 STRCQ7RTU9 1775 aa11.51□□□□□ -0.57
CLRN1-201ENST00000295911 RNMTO43148 476 aaKnown RBP11.51□□□□□ -0.57
CLRN1-201ENST00000295911 GNAI2P04899 355 aa11.51□□□□□ -0.57
CLRN1-201ENST00000295911 EIF4A1P60842 406 aaKnown RBP11.51□□□□□ -0.57
CLRN1-201ENST00000295911 HDGFL1Q5TGJ6 251 aa11.51□□□□□ -0.57
CLRN1-201ENST00000295911 MEIS3Q99687 375 aa11.51□□□□□ -0.57
CLRN1-201ENST00000295911 LGR6Q9HBX8 967 aa11.51□□□□□ -0.57
CLRN1-201ENST00000295911 STK24Q9Y6E0 443 aa11.51□□□□□ -0.57
CLRN1-201ENST00000295911 TNS3Q68CZ2 1445 aa11.5□□□□□ -0.57
CLRN1-201ENST00000295911 BTBD11A6QL63 1104 aa11.5□□□□□ -0.57
CLRN1-201ENST00000295911 VSIG10Q8N0Z9 540 aa11.5□□□□□ -0.57
CLRN1-201ENST00000295911 C22orf23Q9BZE7 217 aa11.5□□□□□ -0.57
CLRN1-201ENST00000295911 TAOK2Q9UL54 1235 aa11.5□□□□□ -0.57
CLRN1-201ENST00000295911 ERBB3P21860 1342 aa11.49□□□□□ -0.57
CLRN1-201ENST00000295911 PXDNQ92626 1479 aa11.49□□□□□ -0.57
CLRN1-201ENST00000295911 F6X3S4 739 aa11.49□□□□□ -0.57
CLRN1-201ENST00000295911 NBR1Q14596 966 aa11.49□□□□□ -0.57
CLRN1-201ENST00000295911 AXIN2Q9Y2T1 843 aa11.49□□□□□ -0.57
CLRN1-201ENST00000295911 STK25O00506 426 aa11.48□□□□□ -0.57
CLRN1-201ENST00000295911 ZC3H6P61129 1189 aaKnown RBP11.48□□□□□ -0.57
CLRN1-201ENST00000295911 RAPGEF4Q8WZA2 1011 aa11.48□□□□□ -0.57
CLRN1-201ENST00000295911 SPG7Q9UQ90 795 aa11.48□□□□□ -0.57
CLRN1-201ENST00000295911 SPATA31A3Q5VYP0 1347 aa11.48□□□□□ -0.57
CLRN1-201ENST00000295911 CPDO75976 1380 aa11.47□□□□□ -0.57
CLRN1-201ENST00000295911 TATP17735 454 aaPredicted RBP11.47□□□□□ -0.57
CLRN1-201ENST00000295911 MFAP1P55081 439 aaKnown RBP11.47□□□□□ -0.57
CLRN1-201ENST00000295911 MPRIPQ6WCQ1 1025 aa11.47□□□□□ -0.57
CLRN1-201ENST00000295911 PLEKHM2Q8IWE5 1019 aa11.47□□□□□ -0.57
CLRN1-201ENST00000295911 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
CLRN1-201ENST00000295911 PKD1L3Q7Z443 1732 aa11.47□□□□□ -0.57
CLRN1-201ENST00000295911 CDC45O75419 566 aa11.46□□□□□ -0.57
CLRN1-201ENST00000295911 SLC4A3P48751 1232 aa11.46□□□□□ -0.57
CLRN1-201ENST00000295911 RBM25P49756 843 aaKnown RBP11.46□□□□□ -0.57
CLRN1-201ENST00000295911 ATP8B2P98198 1209 aa11.46□□□□□ -0.57
CLRN1-201ENST00000295911 NECTIN2Q92692 538 aa11.46□□□□□ -0.57
CLRN1-201ENST00000295911 DBF4Q9UBU7 674 aaPredicted RBP11.46□□□□□ -0.57
CLRN1-201ENST00000295911 EIF2S2P20042 333 aaKnown RBP11.45□□□□□ -0.58
CLRN1-201ENST00000295911 HSPA2P54652 639 aa11.45□□□□□ -0.58
CLRN1-201ENST00000295911 TTC22Q5TAA0 569 aa11.45□□□□□ -0.58
CLRN1-201ENST00000295911 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
CLRN1-201ENST00000295911 MARVELD3Q96A59 401 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms