RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 CWC27Q6UX04 472 aaKnown RBP12.26□□□□□ -0.45
LMX1A-201ENST00000294816 TMEM87AQ8NBN3 555 aa12.26□□□□□ -0.45
LMX1A-201ENST00000294816 FGD1P98174 961 aa12.26□□□□□ -0.45
LMX1A-201ENST00000294816 FAM173BQ6P4H8 233 aa12.26□□□□□ -0.45
LMX1A-201ENST00000294816 CCDC112Q8NEF3 446 aa12.26□□□□□ -0.45
LMX1A-201ENST00000294816 OGFRQ9NZT2 677 aa12.26□□□□□ -0.45
LMX1A-201ENST00000294816 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.26□□□□□ -0.45
LMX1A-201ENST00000294816 NRBP1Q9UHY1 535 aa12.26□□□□□ -0.45
LMX1A-201ENST00000294816 LRRFIP2Q9Y608 721 aaKnown RBP12.26□□□□□ -0.45
LMX1A-201ENST00000294816 V9GYY5 206 aaPredicted RBP12.26□□□□□ -0.45
LMX1A-201ENST00000294816 NCKAP5LQ9HCH0 1330 aa12.25□□□□□ -0.45
LMX1A-201ENST00000294816 CHL1O00533 1208 aa12.25□□□□□ -0.45
LMX1A-201ENST00000294816 LARGE1O95461 756 aa12.25□□□□□ -0.45
LMX1A-201ENST00000294816 HSPA4P34932 840 aa12.25□□□□□ -0.45
LMX1A-201ENST00000294816 RUFY3Q7L099 469 aa12.25□□□□□ -0.45
LMX1A-201ENST00000294816 SNX14Q9Y5W7 946 aa12.25□□□□□ -0.45
LMX1A-201ENST00000294816 MAP3K11Q16584 847 aa12.25□□□□□ -0.45
LMX1A-201ENST00000294816 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
LMX1A-201ENST00000294816 NUP62CLQ9H1M0 184 aa12.25□□□□□ -0.45
LMX1A-201ENST00000294816 NECAB1Q8N987 351 aa12.24□□□□□ -0.45
LMX1A-201ENST00000294816 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
LMX1A-201ENST00000294816 FEZ1Q99689 392 aa12.24□□□□□ -0.45
LMX1A-201ENST00000294816 ZBTB22O15209 634 aa12.24□□□□□ -0.45
LMX1A-201ENST00000294816 SURF6O75683 361 aaKnown RBP12.24□□□□□ -0.45
LMX1A-201ENST00000294816 FAM200AQ8TCP9 573 aa12.24□□□□□ -0.45
LMX1A-201ENST00000294816 NPHP1O15259 732 aa12.24□□□□□ -0.45
LMX1A-201ENST00000294816 CDK11BP21127 795 aaKnown RBP12.24□□□□□ -0.45
LMX1A-201ENST00000294816 TYRO3Q06418 890 aa12.24□□□□□ -0.45
LMX1A-201ENST00000294816 MAPK8IP2Q13387 824 aaPredicted RBP12.24□□□□□ -0.45
LMX1A-201ENST00000294816 JAKMIP1Q96N16 626 aaKnown RBP12.24□□□□□ -0.45
LMX1A-201ENST00000294816 FUCA2Q9BTY2 467 aa12.24□□□□□ -0.45
LMX1A-201ENST00000294816 GNAI3P08754 354 aa12.23□□□□□ -0.45
LMX1A-201ENST00000294816 KCNJ4P48050 445 aa12.23□□□□□ -0.45
LMX1A-201ENST00000294816 ANO6Q4KMQ2 910 aa12.23□□□□□ -0.45
LMX1A-201ENST00000294816 TNMDQ9H2S6 317 aa12.23□□□□□ -0.45
LMX1A-201ENST00000294816 YEATS2Q9ULM3 1422 aa12.23□□□□□ -0.45
LMX1A-201ENST00000294816 ERICH4A6NGS2 130 aa12.23□□□□□ -0.45
LMX1A-201ENST00000294816 FOXO3O43524 673 aa12.23□□□□□ -0.45
LMX1A-201ENST00000294816 CTIFO43310 598 aaKnown RBP12.22□□□□□ -0.45
LMX1A-201ENST00000294816 LIG1P18858 919 aa12.22□□□□□ -0.45
LMX1A-201ENST00000294816 TFIP11Q9UBB9 837 aaKnown RBP12.22□□□□□ -0.45
LMX1A-201ENST00000294816 SMTNL1A8MU46 457 aa12.22□□□□□ -0.45
LMX1A-201ENST00000294816 ATP8B2P98198 1209 aa12.22□□□□□ -0.45
LMX1A-201ENST00000294816 PDRG1Q9NUG6 133 aa12.22□□□□□ -0.45
LMX1A-201ENST00000294816 MTMR6Q9Y217 621 aa12.22□□□□□ -0.45
LMX1A-201ENST00000294816 POGZQ7Z3K3 1410 aa12.22□□□□□ -0.45
LMX1A-201ENST00000294816 OS9Q13438 667 aaPredicted RBP12.22□□□□□ -0.45
LMX1A-201ENST00000294816 EIF4A2Q14240 407 aaKnown RBP12.22□□□□□ -0.45
LMX1A-201ENST00000294816 LMTK2Q8IWU2 1503 aa12.21□□□□□ -0.45
LMX1A-201ENST00000294816 NUTM2FA1L443 756 aa12.21□□□□□ -0.45
LMX1A-201ENST00000294816 LARP1BQ659C4 914 aaKnown RBP12.21□□□□□ -0.45
LMX1A-201ENST00000294816 CTNNA3Q9UI47 895 aa12.21□□□□□ -0.45
LMX1A-201ENST00000294816 RAD50Q92878 1312 aa12.21□□□□□ -0.45
LMX1A-201ENST00000294816 SALL3Q9BXA9 1300 aa12.21□□□□□ -0.45
LMX1A-201ENST00000294816 PTPRMP28827 1452 aa12.21□□□□□ -0.45
LMX1A-201ENST00000294816 VGLL3A8MV65 326 aa12.21□□□□□ -0.45
LMX1A-201ENST00000294816 UBTFL1P0CB47 393 aaPredicted RBP12.21□□□□□ -0.45
LMX1A-201ENST00000294816 KRT85P78386 507 aa12.21□□□□□ -0.45
LMX1A-201ENST00000294816 PRPF40BQ6NWY9 871 aaKnown RBP12.21□□□□□ -0.45
LMX1A-201ENST00000294816 CBX8Q9HC52 389 aa12.21□□□□□ -0.45
LMX1A-201ENST00000294816 DACT1Q9NYF0 836 aa12.21□□□□□ -0.45
LMX1A-201ENST00000294816 MRVI1Q9Y6F6 885 aa12.21□□□□□ -0.45
LMX1A-201ENST00000294816 MAP2P11137 1827 aaKnown RBP12.21□□□□□ -0.45
LMX1A-201ENST00000294816 SSH2Q76I76 1423 aa12.21□□□□□ -0.45
LMX1A-201ENST00000294816 NEXMIFQ5QGS0 1516 aa12.21□□□□□ -0.46
LMX1A-201ENST00000294816 RAPGEF3O95398 923 aa12.21□□□□□ -0.46
LMX1A-201ENST00000294816 TTC6Q86TZ1 520 aa12.21□□□□□ -0.46
LMX1A-201ENST00000294816 ARAP3Q8WWN8 1544 aa12.2□□□□□ -0.46
LMX1A-201ENST00000294816 SGSM2O43147 1006 aa12.2□□□□□ -0.46
LMX1A-201ENST00000294816 CPSF1Q10570 1443 aaKnown RBP12.2□□□□□ -0.46
LMX1A-201ENST00000294816 FLIIQ13045 1269 aa12.2□□□□□ -0.46
LMX1A-201ENST00000294816 BICD2Q8TD16 824 aa12.2□□□□□ -0.46
LMX1A-201ENST00000294816 CLIP2Q9UDT6 1046 aa12.2□□□□□ -0.46
LMX1A-201ENST00000294816 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
LMX1A-201ENST00000294816 CDC42BPGQ6DT37 1551 aa12.2□□□□□ -0.46
LMX1A-201ENST00000294816 ZSCAN25Q6NSZ9 544 aa12.2□□□□□ -0.46
LMX1A-201ENST00000294816 CNTROBQ8N137 903 aa12.2□□□□□ -0.46
LMX1A-201ENST00000294816 TTC14Q96N46 770 aa12.2□□□□□ -0.46
LMX1A-201ENST00000294816 KIDINS220Q9ULH0 1771 aa12.2□□□□□ -0.46
LMX1A-201ENST00000294816 CEP135Q66GS9 1140 aa12.19□□□□□ -0.46
LMX1A-201ENST00000294816 DNAJC25Q9H1X3 360 aa12.19□□□□□ -0.46
LMX1A-201ENST00000294816 TRMT1Q9NXH9 659 aaKnown RBP12.19□□□□□ -0.46
LMX1A-201ENST00000294816 TCEANC2Q96MN5 208 aa12.19□□□□□ -0.46
LMX1A-201ENST00000294816 STAP2Q9UGK3 403 aa12.19□□□□□ -0.46
LMX1A-201ENST00000294816 KIAA0232Q92628 1395 aa12.19□□□□□ -0.46
LMX1A-201ENST00000294816 GTF2E1P29083 439 aaPredicted RBP12.19□□□□□ -0.46
LMX1A-201ENST00000294816 ZNF75DP51815 510 aa12.19□□□□□ -0.46
LMX1A-201ENST00000294816 ADCK5Q3MIX3 580 aa12.19□□□□□ -0.46
LMX1A-201ENST00000294816 HSP90AB2PQ58FF8 381 aa12.19□□□□□ -0.46
LMX1A-201ENST00000294816 FBXO31Q5XUX0 539 aaPredicted RBP12.19□□□□□ -0.46
LMX1A-201ENST00000294816 SLC52A1Q9NWF4 448 aa12.19□□□□□ -0.46
LMX1A-201ENST00000294816 CYP46A1Q9Y6A2 500 aa12.19□□□□□ -0.46
LMX1A-201ENST00000294816 UHRF1BP1LA0JNW5 1464 aa12.18□□□□□ -0.46
LMX1A-201ENST00000294816 TAF3Q5VWG9 929 aa12.18□□□□□ -0.46
LMX1A-201ENST00000294816 CACTINQ8WUQ7 758 aaKnown RBP12.18□□□□□ -0.46
LMX1A-201ENST00000294816 FBXW7Q969H0 707 aa12.18□□□□□ -0.46
LMX1A-201ENST00000294816 LSG1Q9H089 658 aaKnown RBP12.18□□□□□ -0.46
LMX1A-201ENST00000294816 ZNF165P49910 485 aa12.18□□□□□ -0.46
LMX1A-201ENST00000294816 GABPB1Q06547 395 aaPredicted RBP12.18□□□□□ -0.46
LMX1A-201ENST00000294816 STK3Q13188 491 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms