RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 OFD1O75665 1012 aa7.55□□□□□ -1.2
VCAM1-201ENST00000294728 PLEKHG5O94827 1062 aa7.55□□□□□ -1.2
VCAM1-201ENST00000294728 NASPP49321 788 aaPredicted RBP7.55□□□□□ -1.2
VCAM1-201ENST00000294728 HSP90AA1P07900 732 aaKnown RBP7.55□□□□□ -1.2
VCAM1-201ENST00000294728 SDSP20132 328 aa7.55□□□□□ -1.2
VCAM1-201ENST00000294728 SSFA2P28290 1259 aa7.55□□□□□ -1.2
VCAM1-201ENST00000294728 GLIPR1L2Q4G1C9 344 aa7.55□□□□□ -1.2
VCAM1-201ENST00000294728 CHMP4AQ9BY43 222 aa7.55□□□□□ -1.2
VCAM1-201ENST00000294728 NOL7Q9UMY1 257 aaKnown RBP7.55□□□□□ -1.2
VCAM1-201ENST00000294728 LMO7Q8WWI1 1683 aa7.54□□□□□ -1.2
VCAM1-201ENST00000294728 PDIA4P13667 645 aaKnown RBP7.54□□□□□ -1.2
VCAM1-201ENST00000294728 SAFB2Q14151 953 aaKnown RBP eCLIP7.54□□□□□ -1.2
VCAM1-201ENST00000294728 EIF4A2Q14240 407 aaKnown RBP7.54□□□□□ -1.2
VCAM1-201ENST00000294728 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.54□□□□□ -1.2
VCAM1-201ENST00000294728 NME9Q86XW9 330 aa7.54□□□□□ -1.2
VCAM1-201ENST00000294728 TMEM87AQ8NBN3 555 aa7.54□□□□□ -1.2
VCAM1-201ENST00000294728 ERBB4Q15303 1308 aa7.54□□□□□ -1.2
VCAM1-201ENST00000294728 XPCQ01831 940 aaPredicted RBP7.54□□□□□ -1.2
VCAM1-201ENST00000294728 KRT28Q7Z3Y7 464 aa7.54□□□□□ -1.2
VCAM1-201ENST00000294728 FLT4P35916 1363 aa7.54□□□□□ -1.2
VCAM1-201ENST00000294728 OVOS2A0A0G2JMS6 1433 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 MAP7D2Q96T17 732 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 DDX49Q9Y6V7 483 aaKnown RBP7.53□□□□□ -1.2
VCAM1-201ENST00000294728 IGSF1Q8N6C5 1336 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 HMOX1P09601 288 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 PSME1Q06323 249 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 ZSCAN23Q3MJ62 389 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 LRSAM1Q6UWE0 723 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 GZF1Q9H116 711 aaPredicted RBP7.53□□□□□ -1.2
VCAM1-201ENST00000294728 RGPD3A6NKT7 1758 aaPredicted RBP7.53□□□□□ -1.2
VCAM1-201ENST00000294728 RGPD4Q7Z3J3 1758 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 PRR36Q9H6K5 1346 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 EP400Q96L91 3159 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 ADAMTS7Q9UKP4 1686 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 CAMTA1Q9Y6Y1 1673 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 BRD1O95696 1058 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 GNAI3P08754 354 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 PDE1AP54750 535 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 CSPP1Q1MSJ5 1256 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 WAPLQ7Z5K2 1190 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.53□□□□□ -1.2
VCAM1-201ENST00000294728 SPRYD3Q8NCJ5 442 aa7.53□□□□□ -1.2
VCAM1-201ENST00000294728 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.53□□□□□ -1.2
VCAM1-201ENST00000294728 USP42Q9H9J4 1324 aaKnown RBP7.52□□□□□ -1.2
VCAM1-201ENST00000294728 PSDA5PKW4 1024 aaPredicted RBP7.52□□□□□ -1.21
VCAM1-201ENST00000294728 UVSSAQ2YD98 709 aa7.52□□□□□ -1.21
VCAM1-201ENST00000294728 MCCP23508 829 aa7.52□□□□□ -1.21
VCAM1-201ENST00000294728 MTERF4Q7Z6M4 381 aaKnown RBP7.52□□□□□ -1.21
VCAM1-201ENST00000294728 FAM184AQ8NB25 1140 aa7.52□□□□□ -1.21
VCAM1-201ENST00000294728 C1orf115Q9H7X2 142 aa7.52□□□□□ -1.21
VCAM1-201ENST00000294728 ZDHHC9Q9Y397 364 aa7.52□□□□□ -1.21
VCAM1-201ENST00000294728 RAB11FIP3O75154 756 aa7.51□□□□□ -1.21
VCAM1-201ENST00000294728 GNAI2P04899 355 aa7.51□□□□□ -1.21
VCAM1-201ENST00000294728 HOXB7P09629 217 aa7.51□□□□□ -1.21
VCAM1-201ENST00000294728 ATP8B2P98198 1209 aa7.51□□□□□ -1.21
VCAM1-201ENST00000294728 RBM42Q9BTD8 480 aaKnown RBP7.51□□□□□ -1.21
VCAM1-201ENST00000294728 THUMPD2Q9BTF0 503 aaKnown RBP7.51□□□□□ -1.21
VCAM1-201ENST00000294728 PHF8Q9UPP1 1060 aa7.51□□□□□ -1.21
VCAM1-201ENST00000294728 FAM83GA6ND36 823 aa7.51□□□□□ -1.21
VCAM1-201ENST00000294728 SYAP1Q96A49 352 aaPredicted RBP7.51□□□□□ -1.21
VCAM1-201ENST00000294728 ESYT1Q9BSJ8 1104 aa7.51□□□□□ -1.21
VCAM1-201ENST00000294728 PDCL3Q9H2J4 239 aa7.51□□□□□ -1.21
VCAM1-201ENST00000294728 SPATA31A5Q5VU36 1347 aa7.51□□□□□ -1.21
VCAM1-201ENST00000294728 SPATA31A7Q8IWB4 1347 aa7.51□□□□□ -1.21
VCAM1-201ENST00000294728 NCAPD2Q15021 1401 aa7.51□□□□□ -1.21
VCAM1-201ENST00000294728 PLEKHG2Q9H7P9 1386 aa7.51□□□□□ -1.21
VCAM1-201ENST00000294728 PHF14O94880 888 aa7.5□□□□□ -1.21
VCAM1-201ENST00000294728 LETM1O95202 739 aaPredicted RBP7.5□□□□□ -1.21
VCAM1-201ENST00000294728 SIPA1L3O60292 1781 aaPredicted RBP7.5□□□□□ -1.21
VCAM1-201ENST00000294728 CAMKK2Q96RR4 588 aa7.5□□□□□ -1.21
VCAM1-201ENST00000294728 MAP3K5Q99683 1374 aa7.5□□□□□ -1.21
VCAM1-201ENST00000294728 EN1Q05925 392 aaPredicted RBP7.5□□□□□ -1.21
VCAM1-201ENST00000294728 GPT2Q8TD30 523 aa7.5□□□□□ -1.21
VCAM1-201ENST00000294728 CCDC39Q9UFE4 941 aa7.5□□□□□ -1.21
VCAM1-201ENST00000294728 CASZ1Q86V15 1759 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 SULT6B1Q6IMI4 303 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 KCNB2Q92953 911 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 NAP1L5Q96NT1 182 aaPredicted RBP7.49□□□□□ -1.21
VCAM1-201ENST00000294728 MEIS3Q99687 375 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 LRRCC1Q9C099 1032 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 ZKSCAN5Q9Y2L8 839 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 ABCC6O95255 1503 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 LTN1O94822 1766 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 R3HDM1Q15032 1099 aaKnown RBP7.49□□□□□ -1.21
VCAM1-201ENST00000294728 CCDC30Q5VVM6 783 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 MCTP1Q6DN14 999 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 SSH3Q8TE77 659 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 CEMIPQ8WUJ3 1361 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 ACEP12821 1306 aa7.49□□□□□ -1.21
VCAM1-201ENST00000294728 MSNP26038 577 aaKnown RBP7.48□□□□□ -1.21
VCAM1-201ENST00000294728 CHMLP26374 656 aa7.48□□□□□ -1.21
VCAM1-201ENST00000294728 POLA2Q14181 598 aa7.48□□□□□ -1.21
VCAM1-201ENST00000294728 HSP90AA2PQ14568 343 aaPredicted RBP7.48□□□□□ -1.21
VCAM1-201ENST00000294728 CABLES1Q8TDN4 633 aa7.48□□□□□ -1.21
VCAM1-201ENST00000294728 TMX3Q96JJ7 454 aa7.48□□□□□ -1.21
VCAM1-201ENST00000294728 RPAP1Q9BWH6 1393 aaPredicted RBP7.48□□□□□ -1.21
VCAM1-201ENST00000294728 WDR33Q9C0J8 1336 aaKnown RBP7.48□□□□□ -1.21
VCAM1-201ENST00000294728 PARP4Q9UKK3 1724 aaKnown RBP7.48□□□□□ -1.21
VCAM1-201ENST00000294728 SLC4A2P04920 1241 aa7.48□□□□□ -1.21
VCAM1-201ENST00000294728 MX1P20591 662 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms