RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 FLIIQ13045 1269 aa14.62□□□□□ -0.07
CLPB-201ENST00000294053 MTERF4Q7Z6M4 381 aaKnown RBP14.62□□□□□ -0.07
CLPB-201ENST00000294053 PHAXQ9H814 394 aaKnown RBP14.62□□□□□ -0.07
CLPB-201ENST00000294053 KCNQ3O43525 872 aa14.61□□□□□ -0.07
CLPB-201ENST00000294053 CDC45O75419 566 aa14.61□□□□□ -0.07
CLPB-201ENST00000294053 ANXA1P04083 346 aa14.61□□□□□ -0.07
CLPB-201ENST00000294053 TTC22Q5TAA0 569 aa14.61□□□□□ -0.07
CLPB-201ENST00000294053 ANKLE2Q86XL3 938 aa14.61□□□□□ -0.07
CLPB-201ENST00000294053 PSME1Q06323 249 aa14.61□□□□□ -0.07
CLPB-201ENST00000294053 USP25Q9UHP3 1055 aa14.61□□□□□ -0.07
CLPB-201ENST00000294053 AK9Q5TCS8 1911 aa14.61□□□□□ -0.07
CLPB-201ENST00000294053 PNMA6EA0A0J9YXQ4 647 aa14.6□□□□□ -0.07
CLPB-201ENST00000294053 EIF2S2P20042 333 aaKnown RBP14.6□□□□□ -0.07
CLPB-201ENST00000294053 DTNBO60941 627 aa14.6□□□□□ -0.07
CLPB-201ENST00000294053 RPAP2Q8IXW5 612 aaPredicted RBP14.6□□□□□ -0.07
CLPB-201ENST00000294053 STK31Q9BXU1 1019 aa14.6□□□□□ -0.07
CLPB-201ENST00000294053 SDSP20132 328 aa14.6□□□□□ -0.07
CLPB-201ENST00000294053 ST18O60284 1047 aa14.59□□□□□ -0.07
CLPB-201ENST00000294053 LRSAM1Q6UWE0 723 aa14.59□□□□□ -0.07
CLPB-201ENST00000294053 CHD2O14647 1828 aaKnown RBP14.59□□□□□ -0.07
CLPB-201ENST00000294053 ANKARQ7Z5J8 1434 aa14.59□□□□□ -0.07
CLPB-201ENST00000294053 LTN1O94822 1766 aa14.59□□□□□ -0.07
CLPB-201ENST00000294053 MAP3K5Q99683 1374 aa14.59□□□□□ -0.07
CLPB-201ENST00000294053 TERF1P54274 439 aa14.59□□□□□ -0.07
CLPB-201ENST00000294053 FGD1P98174 961 aa14.59□□□□□ -0.07
CLPB-201ENST00000294053 RGPD2P0DJD1 1756 aa14.59□□□□□ -0.07
CLPB-201ENST00000294053 KIF24Q5T7B8 1368 aa14.59□□□□□ -0.07
CLPB-201ENST00000294053 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.07
CLPB-201ENST00000294053 ZNF771Q7L3S4 317 aaPredicted RBP14.58□□□□□ -0.07
CLPB-201ENST00000294053 VGLL3A8MV65 326 aa14.58□□□□□ -0.08
CLPB-201ENST00000294053 NEK4P51957 841 aa14.58□□□□□ -0.08
CLPB-201ENST00000294053 RABEP1Q15276 862 aa14.58□□□□□ -0.08
CLPB-201ENST00000294053 SPC24Q8NBT2 197 aa14.58□□□□□ -0.08
CLPB-201ENST00000294053 TSPY26PQ9H489 355 aa14.58□□□□□ -0.08
CLPB-201ENST00000294053 ZSCAN20P17040 1043 aaPredicted RBP14.57□□□□□ -0.08
CLPB-201ENST00000294053 TAF7Q15545 349 aaPredicted RBP14.57□□□□□ -0.08
CLPB-201ENST00000294053 ATP2B3Q16720 1220 aa14.57□□□□□ -0.08
CLPB-201ENST00000294053 HS1BP3Q53T59 392 aa14.57□□□□□ -0.08
CLPB-201ENST00000294053 MPRIPQ6WCQ1 1025 aa14.57□□□□□ -0.08
CLPB-201ENST00000294053 CGNQ9P2M7 1197 aaKnown RBP14.57□□□□□ -0.08
CLPB-201ENST00000294053 DMTNQ08495 405 aa14.56□□□□□ -0.08
CLPB-201ENST00000294053 LRRFIP2Q9Y608 721 aaKnown RBP14.56□□□□□ -0.08
CLPB-201ENST00000294053 HDGFL1Q5TGJ6 251 aa14.56□□□□□ -0.08
CLPB-201ENST00000294053 CCDC30Q5VVM6 783 aa14.56□□□□□ -0.08
CLPB-201ENST00000294053 KIF3AQ9Y496 699 aa14.56□□□□□ -0.08
CLPB-201ENST00000294053 NOLC1Q14978 699 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLPB-201ENST00000294053 IP6K1Q92551 441 aa14.56□□□□□ -0.08
CLPB-201ENST00000294053 DDX17Q92841 729 aaKnown RBP14.56□□□□□ -0.08
CLPB-201ENST00000294053 PDLIM2Q96JY6 352 aa14.56□□□□□ -0.08
CLPB-201ENST00000294053 U2AF2P26368 475 aaKnown RBP eCLIP14.55□□□□□ -0.08
CLPB-201ENST00000294053 CCT4P50991 539 aaKnown RBP14.55□□□□□ -0.08
CLPB-201ENST00000294053 NCOA3Q9Y6Q9 1424 aa14.55□□□□□ -0.08
CLPB-201ENST00000294053 GNAI2P04899 355 aa14.55□□□□□ -0.08
CLPB-201ENST00000294053 CHMP3Q9Y3E7 222 aa14.55□□□□□ -0.08
CLPB-201ENST00000294053 NPHP4O75161 1426 aaPredicted RBP14.55□□□□□ -0.08
CLPB-201ENST00000294053 LRRC37A3O60309 1634 aa14.55□□□□□ -0.08
CLPB-201ENST00000294053 PDCL2Q8N4E4 241 aa14.54□□□□□ -0.08
CLPB-201ENST00000294053 AXIN2Q9Y2T1 843 aa14.54□□□□□ -0.08
CLPB-201ENST00000294053 FAM208AQ9UK61 1670 aaKnown RBP14.54□□□□□ -0.08
CLPB-201ENST00000294053 PRAMEF22A3QJZ6 481 aa14.54□□□□□ -0.08
CLPB-201ENST00000294053 CASC1Q6TDU7 716 aa14.54□□□□□ -0.08
CLPB-201ENST00000294053 KDM4FA0A1W2PPD8 638 aa14.54□□□□□ -0.08
CLPB-201ENST00000294053 ZBTB22O15209 634 aa14.54□□□□□ -0.08
CLPB-201ENST00000294053 USP44Q9H0E7 712 aa14.54□□□□□ -0.08
CLPB-201ENST00000294053 MYRIPQ8NFW9 859 aa14.53□□□□□ -0.08
CLPB-201ENST00000294053 IL1RAPL2Q9NP60 686 aa14.53□□□□□ -0.08
CLPB-201ENST00000294053 CHPF2Q9P2E5 772 aa14.53□□□□□ -0.08
CLPB-201ENST00000294053 GCP02774 474 aa14.53□□□□□ -0.08
CLPB-201ENST00000294053 PDE1AP54750 535 aa14.53□□□□□ -0.08
CLPB-201ENST00000294053 CHAF1AQ13111 956 aaPredicted RBP14.53□□□□□ -0.08
CLPB-201ENST00000294053 LARP6Q9BRS8 491 aaKnown RBP14.53□□□□□ -0.08
CLPB-201ENST00000294053 USP26Q9BXU7 913 aa14.53□□□□□ -0.08
CLPB-201ENST00000294053 NFAT5O94916 1531 aa14.53□□□□□ -0.08
CLPB-201ENST00000294053 PDE4CQ08493 712 aa14.53□□□□□ -0.08
CLPB-201ENST00000294053 ZDHHC9Q9Y397 364 aa14.53□□□□□ -0.08
CLPB-201ENST00000294053 HTATSF1O43719 755 aaKnown RBP14.52□□□□□ -0.08
CLPB-201ENST00000294053 GADD45BO75293 160 aaPredicted RBP14.52□□□□□ -0.08
CLPB-201ENST00000294053 HCLS1P14317 486 aaPredicted RBP14.52□□□□□ -0.08
CLPB-201ENST00000294053 ZNF530Q6P9A1 599 aaPredicted RBP14.52□□□□□ -0.08
CLPB-201ENST00000294053 ZNF710Q8N1W2 664 aa14.52□□□□□ -0.08
CLPB-201ENST00000294053 ADCY5O95622 1261 aa14.52□□□□□ -0.09
CLPB-201ENST00000294053 CDK11BP21127 795 aaKnown RBP14.52□□□□□ -0.09
CLPB-201ENST00000294053 PXDNQ92626 1479 aa14.51□□□□□ -0.09
CLPB-201ENST00000294053 HMMRO75330 724 aa14.51□□□□□ -0.09
CLPB-201ENST00000294053 MCM5P33992 734 aa14.51□□□□□ -0.09
CLPB-201ENST00000294053 UPF3BQ9BZI7 483 aaKnown RBP14.51□□□□□ -0.09
CLPB-201ENST00000294053 NBPF7P0C2Y1 421 aaPredicted RBP14.51□□□□□ -0.09
CLPB-201ENST00000294053 EIF4A1P60842 406 aaKnown RBP14.51□□□□□ -0.09
CLPB-201ENST00000294053 UNC5CLQ8IV45 518 aa14.51□□□□□ -0.09
CLPB-201ENST00000294053 PLCD3Q8N3E9 789 aa14.51□□□□□ -0.09
CLPB-201ENST00000294053 ADGRL3Q9HAR2 1447 aa14.51□□□□□ -0.09
CLPB-201ENST00000294053 ZC3H6P61129 1189 aaKnown RBP14.51□□□□□ -0.09
CLPB-201ENST00000294053 BCL2L12Q9HB09 334 aa14.51□□□□□ -0.09
CLPB-201ENST00000294053 MAP4K4O95819 1239 aaPredicted RBP14.5□□□□□ -0.09
CLPB-201ENST00000294053 CEMIPQ8WUJ3 1361 aa14.5□□□□□ -0.09
CLPB-201ENST00000294053 HMGN5P82970 282 aaKnown RBP14.5□□□□□ -0.09
CLPB-201ENST00000294053 PROSER3Q2NL68 480 aa14.5□□□□□ -0.09
CLPB-201ENST00000294053 SYAP1Q96A49 352 aaPredicted RBP14.5□□□□□ -0.09
CLPB-201ENST00000294053 CWC22Q9HCG8 908 aaKnown RBP14.5□□□□□ -0.09
CLPB-201ENST00000294053 PI4KAP2A4QPH2 592 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms