RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 HSP90AA2PQ14568 343 aaPredicted RBP20.45■□□□□ 0.86
CHRNE-201ENST00000293780 LGR6Q9HBX8 967 aa20.45■□□□□ 0.86
CHRNE-201ENST00000293780 KCNA6P17658 529 aa20.45■□□□□ 0.86
CHRNE-201ENST00000293780 RHPN1Q8TCX5 695 aa20.45■□□□□ 0.86
CHRNE-201ENST00000293780 POLA2Q14181 598 aa20.44■□□□□ 0.86
CHRNE-201ENST00000293780 PI4K2BQ8TCG2 481 aa20.44■□□□□ 0.86
CHRNE-201ENST00000293780 INTS4Q96HW7 963 aaKnown RBP20.44■□□□□ 0.86
CHRNE-201ENST00000293780 BABAM1Q9NWV8 329 aa20.44■□□□□ 0.86
CHRNE-201ENST00000293780 SRGAP3O43295 1099 aa20.44■□□□□ 0.86
CHRNE-201ENST00000293780 KCNQ3O43525 872 aa20.44■□□□□ 0.86
CHRNE-201ENST00000293780 GDPD2Q9HCC8 539 aa20.44■□□□□ 0.86
CHRNE-201ENST00000293780 MARF1Q9Y4F3 1742 aaKnown RBP20.44■□□□□ 0.86
CHRNE-201ENST00000293780 SLIT1O75093 1534 aa20.43■□□□□ 0.86
CHRNE-201ENST00000293780 ANXA1P04083 346 aa20.43■□□□□ 0.86
CHRNE-201ENST00000293780 HSPA4P34932 840 aa20.43■□□□□ 0.86
CHRNE-201ENST00000293780 PDLIM2Q96JY6 352 aa20.43■□□□□ 0.86
CHRNE-201ENST00000293780 ARHGAP23Q9P227 1491 aa20.43■□□□□ 0.86
CHRNE-201ENST00000293780 AOX1Q06278 1338 aa20.43■□□□□ 0.86
CHRNE-201ENST00000293780 IL17RAQ96F46 866 aa20.43■□□□□ 0.86
CHRNE-201ENST00000293780 PXDNLA1KZ92 1463 aa20.42■□□□□ 0.86
CHRNE-201ENST00000293780 RAB11FIP3O75154 756 aa20.42■□□□□ 0.86
CHRNE-201ENST00000293780 CHPF2Q9P2E5 772 aa20.42■□□□□ 0.86
CHRNE-201ENST00000293780 SETD1BQ9UPS6 1966 aaKnown RBP20.42■□□□□ 0.86
CHRNE-201ENST00000293780 RRP9O43818 475 aaKnown RBP20.42■□□□□ 0.86
CHRNE-201ENST00000293780 MSNP26038 577 aaKnown RBP20.42■□□□□ 0.86
CHRNE-201ENST00000293780 EIF4A1P60842 406 aaKnown RBP20.41■□□□□ 0.86
CHRNE-201ENST00000293780 RNF214Q8ND24 703 aa20.41■□□□□ 0.86
CHRNE-201ENST00000293780 LARP6Q9BRS8 491 aaKnown RBP20.41■□□□□ 0.86
CHRNE-201ENST00000293780 PI4KAP2A4QPH2 592 aa20.41■□□□□ 0.86
CHRNE-201ENST00000293780 GADD45BO75293 160 aaPredicted RBP20.41■□□□□ 0.86
CHRNE-201ENST00000293780 MBD3O95983 291 aa20.41■□□□□ 0.86
CHRNE-201ENST00000293780 NBPF6Q5VWK0 638 aa20.41■□□□□ 0.86
CHRNE-201ENST00000293780 PI4KAP1Q8N8J0 262 aa20.41■□□□□ 0.86
CHRNE-201ENST00000293780 NBPF4Q96M43 638 aa20.41■□□□□ 0.86
CHRNE-201ENST00000293780 ZBTB7CA1YPR0 619 aa20.4■□□□□ 0.86
CHRNE-201ENST00000293780 BEND3Q5T5X7 828 aa20.4■□□□□ 0.86
CHRNE-201ENST00000293780 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.4■□□□□ 0.86
CHRNE-201ENST00000293780 SGSM2O43147 1006 aa20.39■□□□□ 0.86
CHRNE-201ENST00000293780 N4BP2Q86UW6 1770 aaPredicted RBP20.39■□□□□ 0.86
CHRNE-201ENST00000293780 KIF1BPQ96EK5 621 aa20.39■□□□□ 0.85
CHRNE-201ENST00000293780 RBM33Q96EV2 1170 aaKnown RBP20.39■□□□□ 0.85
CHRNE-201ENST00000293780 RASEFQ8IZ41 740 aa20.38■□□□□ 0.85
CHRNE-201ENST00000293780 SNX14Q9Y5W7 946 aa20.38■□□□□ 0.85
CHRNE-201ENST00000293780 CEMIPQ8WUJ3 1361 aa20.38■□□□□ 0.85
CHRNE-201ENST00000293780 DNAAF4Q8WXU2 420 aa20.38■□□□□ 0.85
CHRNE-201ENST00000293780 PKNOX2Q96KN3 472 aa20.38■□□□□ 0.85
CHRNE-201ENST00000293780 LSG1Q9H089 658 aaKnown RBP20.38■□□□□ 0.85
CHRNE-201ENST00000293780 KIAA1211Q6ZU35 1233 aa20.37■□□□□ 0.85
CHRNE-201ENST00000293780 VSIG10Q8N0Z9 540 aa20.37■□□□□ 0.85
CHRNE-201ENST00000293780 ANKARQ7Z5J8 1434 aa20.37■□□□□ 0.85
CHRNE-201ENST00000293780 CWC27Q6UX04 472 aaKnown RBP20.37■□□□□ 0.85
CHRNE-201ENST00000293780 USP48Q86UV5 1035 aa20.37■□□□□ 0.85
CHRNE-201ENST00000293780 NOL7Q9UMY1 257 aaKnown RBP20.37■□□□□ 0.85
CHRNE-201ENST00000293780 SPG7Q9UQ90 795 aa20.37■□□□□ 0.85
CHRNE-201ENST00000293780 RAD50Q92878 1312 aa20.37■□□□□ 0.85
CHRNE-201ENST00000293780 HS1BP3Q53T59 392 aa20.36■□□□□ 0.85
CHRNE-201ENST00000293780 IP6K1Q92551 441 aa20.36■□□□□ 0.85
CHRNE-201ENST00000293780 TCHHQ07283 1943 aa20.36■□□□□ 0.85
CHRNE-201ENST00000293780 DTNBO60941 627 aa20.35■□□□□ 0.85
CHRNE-201ENST00000293780 OFD1O75665 1012 aa20.35■□□□□ 0.85
CHRNE-201ENST00000293780 PLEKHG5O94827 1062 aa20.35■□□□□ 0.85
CHRNE-201ENST00000293780 CPA1P15085 419 aa20.35■□□□□ 0.85
CHRNE-201ENST00000293780 TPRNQ4KMQ1 711 aa20.35■□□□□ 0.85
CHRNE-201ENST00000293780 CNTROBQ8N137 903 aa20.35■□□□□ 0.85
CHRNE-201ENST00000293780 RPAP1Q9BWH6 1393 aaPredicted RBP20.35■□□□□ 0.85
CHRNE-201ENST00000293780 AK2P54819 239 aa20.35■□□□□ 0.85
CHRNE-201ENST00000293780 MPRIPQ6WCQ1 1025 aa20.35■□□□□ 0.85
CHRNE-201ENST00000293780 LRRC59Q96AG4 307 aaKnown RBP20.35■□□□□ 0.85
CHRNE-201ENST00000293780 TTC14Q96N46 770 aa20.35■□□□□ 0.85
CHRNE-201ENST00000293780 WDR33Q9C0J8 1336 aaKnown RBP20.34■□□□□ 0.85
CHRNE-201ENST00000293780 BTBD11A6QL63 1104 aa20.34■□□□□ 0.85
CHRNE-201ENST00000293780 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
CHRNE-201ENST00000293780 PHF8Q9UPP1 1060 aa20.34■□□□□ 0.85
CHRNE-201ENST00000293780 ADCY9O60503 1353 aa20.34■□□□□ 0.85
CHRNE-201ENST00000293780 OS9Q13438 667 aaPredicted RBP20.33■□□□□ 0.85
CHRNE-201ENST00000293780 RUFY3Q7L099 469 aa20.33■□□□□ 0.85
CHRNE-201ENST00000293780 ZNF142P52746 1687 aaPredicted RBP20.33■□□□□ 0.85
CHRNE-201ENST00000293780 TSPY26PQ9H489 355 aa20.33■□□□□ 0.84
CHRNE-201ENST00000293780 XPCQ01831 940 aaPredicted RBP20.32■□□□□ 0.84
CHRNE-201ENST00000293780 LTN1O94822 1766 aa20.32■□□□□ 0.84
CHRNE-201ENST00000293780 CNPY2Q9Y2B0 182 aa20.32■□□□□ 0.84
CHRNE-201ENST00000293780 TEFQ10587 303 aa20.31■□□□□ 0.84
CHRNE-201ENST00000293780 ZNF530Q6P9A1 599 aaPredicted RBP20.31■□□□□ 0.84
CHRNE-201ENST00000293780 ANKLE2Q86XL3 938 aa20.31■□□□□ 0.84
CHRNE-201ENST00000293780 ZMYND15Q9H091 742 aa20.31■□□□□ 0.84
CHRNE-201ENST00000293780 PA2G4Q9UQ80 394 aaKnown RBP20.31■□□□□ 0.84
CHRNE-201ENST00000293780 TPM2P07951 284 aa20.31■□□□□ 0.84
CHRNE-201ENST00000293780 HOXB7P09629 217 aa20.3■□□□□ 0.84
CHRNE-201ENST00000293780 PTH1RQ03431 593 aa20.3■□□□□ 0.84
CHRNE-201ENST00000293780 PROSER3Q2NL68 480 aa20.3■□□□□ 0.84
CHRNE-201ENST00000293780 LARGE1O95461 756 aa20.3■□□□□ 0.84
CHRNE-201ENST00000293780 LIMCH1Q9UPQ0 1083 aa20.3■□□□□ 0.84
CHRNE-201ENST00000293780 ZKSCAN5Q9Y2L8 839 aa20.3■□□□□ 0.84
CHRNE-201ENST00000293780 USP54Q70EL1 1684 aa20.29■□□□□ 0.84
CHRNE-201ENST00000293780 PRAMEF22A3QJZ6 481 aa20.29■□□□□ 0.84
CHRNE-201ENST00000293780 ZNF500O60304 480 aaPredicted RBP20.29■□□□□ 0.84
CHRNE-201ENST00000293780 CASTP20810 708 aaKnown RBP20.29■□□□□ 0.84
CHRNE-201ENST00000293780 SYAP1Q96A49 352 aaPredicted RBP20.29■□□□□ 0.84
CHRNE-201ENST00000293780 MAP3K2Q9Y2U5 619 aa20.29■□□□□ 0.84
CHRNE-201ENST00000293780 MED1Q15648 1581 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 219.5 ms