RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 USPL1Q5W0Q7 1092 aa33.86■■■■□ 3.01
U2AF1-201ENST00000291552 TEFQ10587 303 aa33.85■■■■□ 3.01
U2AF1-201ENST00000291552 TM4SF1P30408 202 aa33.84■■■■□ 3.01
U2AF1-201ENST00000291552 ZNF496Q96IT1 587 aaPredicted RBP33.84■■■■□ 3.01
U2AF1-201ENST00000291552 POLRMTO00411 1230 aaKnown RBP33.83■■■■□ 3.01
U2AF1-201ENST00000291552 GIGYF1O75420 1035 aaPredicted RBP33.83■■■■□ 3.01
U2AF1-201ENST00000291552 TTC5Q8N0Z6 440 aa33.83■■■■□ 3.01
U2AF1-201ENST00000291552 HEG1Q9ULI3 1381 aa33.83■■■■□ 3.01
U2AF1-201ENST00000291552 KCNA3P22001 575 aa33.82■■■■□ 3
U2AF1-201ENST00000291552 ZNF790Q6PG37 636 aa33.82■■■■□ 3
U2AF1-201ENST00000291552 BCL2L12Q9HB09 334 aa33.82■■■■□ 3
U2AF1-201ENST00000291552 SCN7AQ01118 1682 aa33.82■■■■□ 3
U2AF1-201ENST00000291552 ZPR1O75312 459 aa33.81■■■■□ 3
U2AF1-201ENST00000291552 NARFQ9UHQ1 456 aa33.81■■■■□ 3
U2AF1-201ENST00000291552 NUDCQ9Y266 331 aa33.81■■■■□ 3
U2AF1-201ENST00000291552 U2AF1L5P0DN76 240 aaPredicted RBP33.8■■■■□ 3
U2AF1-201ENST00000291552 U2AF1Q01081 240 aaKnown RBP eCLIP33.8■■■■□ 3
U2AF1-201ENST00000291552 BCS1LQ9Y276 419 aa33.8■■■■□ 3
U2AF1-201ENST00000291552 DLG5Q8TDM6 1919 aa33.79■■■■□ 3
U2AF1-201ENST00000291552 KCNQ3O43525 872 aa33.77■■■■□ 3
U2AF1-201ENST00000291552 CANXP27824 592 aaKnown RBP33.77■■■■□ 3
U2AF1-201ENST00000291552 NFIXQ14938 502 aa33.77■■■■□ 3
U2AF1-201ENST00000291552 DLEC1Q9Y238 1755 aa33.77■■■■□ 3
U2AF1-201ENST00000291552 EIF5P55010 431 aaKnown RBP33.76■■■□□ 2.99
U2AF1-201ENST00000291552 FCHSD2O94868 740 aa33.74■■■□□ 2.99
U2AF1-201ENST00000291552 STARD3NLO95772 234 aa33.74■■■□□ 2.99
U2AF1-201ENST00000291552 BCORQ6W2J9 1755 aa33.72■■■□□ 2.99
U2AF1-201ENST00000291552 CHRNA5P30532 468 aa33.72■■■□□ 2.99
U2AF1-201ENST00000291552 MCM10Q7L590 875 aa33.71■■■□□ 2.99
U2AF1-201ENST00000291552 ZNF526Q8TF50 670 aaPredicted RBP33.71■■■□□ 2.99
U2AF1-201ENST00000291552 FMNL2Q96PY5 1086 aa33.71■■■□□ 2.99
U2AF1-201ENST00000291552 ANKRD31Q8N7Z5 1873 aa33.71■■■□□ 2.99
U2AF1-201ENST00000291552 BTBD11A6QL63 1104 aa33.7■■■□□ 2.99
U2AF1-201ENST00000291552 GPBP1L1Q9HC44 474 aaPredicted RBP33.7■■■□□ 2.99
U2AF1-201ENST00000291552 SENP3-EIF4A1A0A087X0R7 540 aa33.69■■■□□ 2.98
U2AF1-201ENST00000291552 SBF1O95248 1867 aa33.68■■■□□ 2.98
U2AF1-201ENST00000291552 TEX13AQ9BXU3 409 aaPredicted RBP33.68■■■□□ 2.98
U2AF1-201ENST00000291552 PIM2Q9P1W9 311 aa33.68■■■□□ 2.98
U2AF1-201ENST00000291552 CARMIL3Q8ND23 1372 aa33.68■■■□□ 2.98
U2AF1-201ENST00000291552 DCTN1Q14203 1278 aa33.67■■■□□ 2.98
U2AF1-201ENST00000291552 ARHGAP27Q6ZUM4 889 aa33.67■■■□□ 2.98
U2AF1-201ENST00000291552 A1BGP04217 495 aa33.66■■■□□ 2.98
U2AF1-201ENST00000291552 A0A087WZG4 1122 aa33.65■■■□□ 2.98
U2AF1-201ENST00000291552 SERPINB2P05120 415 aa33.65■■■□□ 2.98
U2AF1-201ENST00000291552 PRAMEF22A3QJZ6 481 aa33.64■■■□□ 2.98
U2AF1-201ENST00000291552 IL6STP40189 918 aaPredicted RBP33.64■■■□□ 2.98
U2AF1-201ENST00000291552 DALRD3Q5D0E6 543 aaKnown RBP33.64■■■□□ 2.98
U2AF1-201ENST00000291552 KDM3BQ7LBC6 1761 aa33.63■■■□□ 2.97
U2AF1-201ENST00000291552 COL11A2P13942 1736 aaPredicted RBP33.63■■■□□ 2.97
U2AF1-201ENST00000291552 RTF1Q92541 710 aaKnown RBP33.63■■■□□ 2.97
U2AF1-201ENST00000291552 LAMB4A4D0S4 1761 aa33.62■■■□□ 2.97
U2AF1-201ENST00000291552 TBC1D2BQ9UPU7 963 aa33.62■■■□□ 2.97
U2AF1-201ENST00000291552 ZNF330Q9Y3S2 320 aaPredicted RBP33.62■■■□□ 2.97
U2AF1-201ENST00000291552 USP16Q9Y5T5 823 aa33.62■■■□□ 2.97
U2AF1-201ENST00000291552 TBC1D9BQ66K14 1250 aa33.61■■■□□ 2.97
U2AF1-201ENST00000291552 BICDL1Q6ZP65 573 aa33.61■■■□□ 2.97
U2AF1-201ENST00000291552 HTATSF1O43719 755 aaKnown RBP33.6■■■□□ 2.97
U2AF1-201ENST00000291552 CEP350Q5VT06 3117 aa33.59■■■□□ 2.97
U2AF1-201ENST00000291552 CAMTA2O94983 1202 aa33.58■■■□□ 2.97
U2AF1-201ENST00000291552 PIP4K2AP48426 406 aaPredicted RBP33.58■■■□□ 2.97
U2AF1-201ENST00000291552 PLEKHF1Q96S99 279 aa33.58■■■□□ 2.97
U2AF1-201ENST00000291552 KIF3CO14782 793 aa33.57■■■□□ 2.96
U2AF1-201ENST00000291552 C9orf131Q5VYM1 1079 aa33.55■■■□□ 2.96
U2AF1-201ENST00000291552 SNRPA1P09661 255 aaKnown RBP33.54■■■□□ 2.96
U2AF1-201ENST00000291552 CCDC88AQ3V6T2 1871 aa33.53■■■□□ 2.96
U2AF1-201ENST00000291552 TAF7Q15545 349 aaPredicted RBP33.52■■■□□ 2.96
U2AF1-201ENST00000291552 C2CD5Q86YS7 1000 aa33.52■■■□□ 2.96
U2AF1-201ENST00000291552 PRR5LQ6MZQ0 368 aa33.51■■■□□ 2.95
U2AF1-201ENST00000291552 DZIP3Q86Y13 1208 aaKnown RBP33.51■■■□□ 2.95
U2AF1-201ENST00000291552 MIS18AQ9NYP9 233 aa33.51■■■□□ 2.95
U2AF1-201ENST00000291552 CACNA1SQ13698 1873 aa33.5■■■□□ 2.95
U2AF1-201ENST00000291552 NBPF26B4DH59 902 aa33.5■■■□□ 2.95
U2AF1-201ENST00000291552 NBPF10Q6P3W6 841 aaKnown RBP33.5■■■□□ 2.95
U2AF1-201ENST00000291552 NBPF15Q8N660 670 aa33.5■■■□□ 2.95
U2AF1-201ENST00000291552 NFE2L2Q16236 605 aa33.49■■■□□ 2.95
U2AF1-201ENST00000291552 CCDC24Q8N4L8 307 aa33.49■■■□□ 2.95
U2AF1-201ENST00000291552 RASSF7Q02833 373 aa33.48■■■□□ 2.95
U2AF1-201ENST00000291552 THUMPD2Q9BTF0 503 aaKnown RBP33.47■■■□□ 2.95
U2AF1-201ENST00000291552 RNF181Q9P0P0 153 aa33.47■■■□□ 2.95
U2AF1-201ENST00000291552 ARFGEF2Q9Y6D5 1785 aa33.47■■■□□ 2.95
U2AF1-201ENST00000291552 TIAM2Q8IVF5 1701 aa33.46■■■□□ 2.95
U2AF1-201ENST00000291552 NMRK2Q9NPI5 230 aa33.46■■■□□ 2.95
U2AF1-201ENST00000291552 H0YIN7 160 aa33.45■■■□□ 2.95
U2AF1-201ENST00000291552 PRELPP51888 382 aa33.45■■■□□ 2.95
U2AF1-201ENST00000291552 NPM2Q86SE8 214 aaKnown RBP33.45■■■□□ 2.95
U2AF1-201ENST00000291552 TTLL6Q8N841 843 aa33.45■■■□□ 2.95
U2AF1-201ENST00000291552 FER1L6Q2WGJ9 1857 aa33.44■■■□□ 2.94
U2AF1-201ENST00000291552 NEFMP07197 916 aa33.44■■■□□ 2.94
U2AF1-201ENST00000291552 RALBP1Q15311 655 aa33.44■■■□□ 2.94
U2AF1-201ENST00000291552 SETDB2Q96T68 719 aa33.44■■■□□ 2.94
U2AF1-201ENST00000291552 BRIP1Q9BX63 1249 aa33.44■■■□□ 2.94
U2AF1-201ENST00000291552 SLX4Q8IY92 1834 aa33.43■■■□□ 2.94
U2AF1-201ENST00000291552 TNRC6CQ9HCJ0 1690 aaKnown RBP33.42■■■□□ 2.94
U2AF1-201ENST00000291552 DDX10Q13206 875 aaKnown RBP33.41■■■□□ 2.94
U2AF1-201ENST00000291552 CNBD1Q8NA66 436 aa33.41■■■□□ 2.94
U2AF1-201ENST00000291552 NUP98P52948 1817 aa33.4■■■□□ 2.94
U2AF1-201ENST00000291552 MAPK8IP3Q9UPT6 1336 aa33.4■■■□□ 2.94
U2AF1-201ENST00000291552 HSPA6P17066 643 aa33.39■■■□□ 2.94
U2AF1-201ENST00000291552 PDE6BP35913 854 aa33.39■■■□□ 2.94
U2AF1-201ENST00000291552 CLEC4GQ6UXB4 293 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms