RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 IL17REQ8NFR9 667 aa11.99□□□□□ -0.49
TFF1-201ENST00000291527 CCDC87Q9NVE4 849 aa11.99□□□□□ -0.49
TFF1-201ENST00000291527 ZBTB1Q9Y2K1 713 aa11.99□□□□□ -0.49
TFF1-201ENST00000291527 SOS1Q07889 1333 aaPredicted RBP11.99□□□□□ -0.49
TFF1-201ENST00000291527 KCNQ3O43525 872 aa11.98□□□□□ -0.49
TFF1-201ENST00000291527 DIAPH1O60610 1272 aaKnown RBP11.98□□□□□ -0.49
TFF1-201ENST00000291527 NMRK2Q9NPI5 230 aa11.98□□□□□ -0.49
TFF1-201ENST00000291527 ANKRD31Q8N7Z5 1873 aa11.97□□□□□ -0.49
TFF1-201ENST00000291527 NRXN2Q9P2S2 1712 aa11.97□□□□□ -0.49
TFF1-201ENST00000291527 HMGB2P26583 209 aaKnown RBP11.97□□□□□ -0.49
TFF1-201ENST00000291527 NFIXQ14938 502 aa11.97□□□□□ -0.49
TFF1-201ENST00000291527 PHACTR3Q96KR7 559 aa11.97□□□□□ -0.49
TFF1-201ENST00000291527 CARMIL3Q8ND23 1372 aa11.96□□□□□ -0.49
TFF1-201ENST00000291527 ZEB1P37275 1124 aaPredicted RBP11.96□□□□□ -0.49
TFF1-201ENST00000291527 C9orf131Q5VYM1 1079 aa11.96□□□□□ -0.49
TFF1-201ENST00000291527 CCDC24Q8N4L8 307 aa11.96□□□□□ -0.49
TFF1-201ENST00000291527 PRAMEF22A3QJZ6 481 aa11.95□□□□□ -0.5
TFF1-201ENST00000291527 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
TFF1-201ENST00000291527 CANXP27824 592 aaKnown RBP11.95□□□□□ -0.5
TFF1-201ENST00000291527 ZNF496Q96IT1 587 aaPredicted RBP11.95□□□□□ -0.5
TFF1-201ENST00000291527 COL15A1P39059 1388 aa11.94□□□□□ -0.5
TFF1-201ENST00000291527 HSPA6P17066 643 aa11.94□□□□□ -0.5
TFF1-201ENST00000291527 PIP4K2AP48426 406 aaPredicted RBP11.94□□□□□ -0.5
TFF1-201ENST00000291527 HTRA3P83110 453 aa11.94□□□□□ -0.5
TFF1-201ENST00000291527 RASSF7Q02833 373 aa11.94□□□□□ -0.5
TFF1-201ENST00000291527 DLEC1Q9Y238 1755 aa11.94□□□□□ -0.5
TFF1-201ENST00000291527 CACNA1SQ13698 1873 aa11.93□□□□□ -0.5
TFF1-201ENST00000291527 A1BGP04217 495 aa11.93□□□□□ -0.5
TFF1-201ENST00000291527 BICDL1Q6ZP65 573 aa11.93□□□□□ -0.5
TFF1-201ENST00000291527 PIM2Q9P1W9 311 aa11.93□□□□□ -0.5
TFF1-201ENST00000291527 NARFQ9UHQ1 456 aa11.93□□□□□ -0.5
TFF1-201ENST00000291527 COL11A2P13942 1736 aaPredicted RBP11.93□□□□□ -0.5
TFF1-201ENST00000291527 ZPR1O75312 459 aa11.92□□□□□ -0.5
TFF1-201ENST00000291527 SERPINB2P05120 415 aa11.92□□□□□ -0.5
TFF1-201ENST00000291527 EIF5P55010 431 aaKnown RBP11.92□□□□□ -0.5
TFF1-201ENST00000291527 DALRD3Q5D0E6 543 aaKnown RBP11.92□□□□□ -0.5
TFF1-201ENST00000291527 TBC1D9BQ66K14 1250 aa11.92□□□□□ -0.5
TFF1-201ENST00000291527 DCTN1Q14203 1278 aa11.91□□□□□ -0.5
TFF1-201ENST00000291527 RSPH6AQ9H0K4 717 aa11.91□□□□□ -0.5
TFF1-201ENST00000291527 RNF181Q9P0P0 153 aa11.91□□□□□ -0.5
TFF1-201ENST00000291527 TBC1D2BQ9UPU7 963 aa11.91□□□□□ -0.5
TFF1-201ENST00000291527 NPC1L1Q9UHC9 1359 aa11.91□□□□□ -0.5
TFF1-201ENST00000291527 GNAT3A8MTJ3 354 aa11.9□□□□□ -0.5
TFF1-201ENST00000291527 PRKAR2BP31323 418 aa11.9□□□□□ -0.5
TFF1-201ENST00000291527 ZNF790Q6PG37 636 aa11.9□□□□□ -0.5
TFF1-201ENST00000291527 DNAJC5GQ8N7S2 189 aa11.9□□□□□ -0.5
TFF1-201ENST00000291527 USP16Q9Y5T5 823 aa11.9□□□□□ -0.5
TFF1-201ENST00000291527 SLX4Q8IY92 1834 aa11.9□□□□□ -0.5
TFF1-201ENST00000291527 SCN7AQ01118 1682 aa11.9□□□□□ -0.5
TFF1-201ENST00000291527 HEG1Q9ULI3 1381 aa11.9□□□□□ -0.5
TFF1-201ENST00000291527 DLG5Q8TDM6 1919 aa11.9□□□□□ -0.51
TFF1-201ENST00000291527 MCM10Q7L590 875 aa11.89□□□□□ -0.51
TFF1-201ENST00000291527 VSIG10Q8N0Z9 540 aa11.89□□□□□ -0.51
TFF1-201ENST00000291527 RRAGCQ9HB90 399 aa11.89□□□□□ -0.51
TFF1-201ENST00000291527 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
TFF1-201ENST00000291527 CEMIPQ8WUJ3 1361 aa11.89□□□□□ -0.51
TFF1-201ENST00000291527 PPP2R1AP30153 589 aa11.88□□□□□ -0.51
TFF1-201ENST00000291527 C2CD5Q86YS7 1000 aa11.88□□□□□ -0.51
TFF1-201ENST00000291527 ZNF330Q9Y3S2 320 aaPredicted RBP11.88□□□□□ -0.51
TFF1-201ENST00000291527 BCORQ6W2J9 1755 aa11.87□□□□□ -0.51
TFF1-201ENST00000291527 FER1L6Q2WGJ9 1857 aa11.87□□□□□ -0.51
TFF1-201ENST00000291527 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
TFF1-201ENST00000291527 WDR90Q96KV7 1748 aa11.87□□□□□ -0.51
TFF1-201ENST00000291527 NFKBIEO00221 500 aa11.87□□□□□ -0.51
TFF1-201ENST00000291527 CAMTA2O94983 1202 aa11.87□□□□□ -0.51
TFF1-201ENST00000291527 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
TFF1-201ENST00000291527 DICER1Q9UPY3 1922 aaKnown RBP11.86□□□□□ -0.51
TFF1-201ENST00000291527 TOMM70O94826 608 aa11.86□□□□□ -0.51
TFF1-201ENST00000291527 TEFQ10587 303 aa11.86□□□□□ -0.51
TFF1-201ENST00000291527 PRR5LQ6MZQ0 368 aa11.86□□□□□ -0.51
TFF1-201ENST00000291527 TTC5Q8N0Z6 440 aa11.86□□□□□ -0.51
TFF1-201ENST00000291527 GAS2L2Q8NHY3 880 aa11.86□□□□□ -0.51
TFF1-201ENST00000291527 BTBD11A6QL63 1104 aa11.85□□□□□ -0.51
TFF1-201ENST00000291527 POTECB2RU33 542 aa11.85□□□□□ -0.51
TFF1-201ENST00000291527 NBPF26B4DH59 902 aa11.85□□□□□ -0.51
TFF1-201ENST00000291527 STARD3NLO95772 234 aa11.85□□□□□ -0.51
TFF1-201ENST00000291527 NBPF10Q6P3W6 841 aaKnown RBP11.85□□□□□ -0.51
TFF1-201ENST00000291527 SLC51AQ86UW1 340 aa11.85□□□□□ -0.51
TFF1-201ENST00000291527 NBPF15Q8N660 670 aa11.85□□□□□ -0.51
TFF1-201ENST00000291527 C21orf2O43822 256 aa11.84□□□□□ -0.51
TFF1-201ENST00000291527 U2AF1L5P0DN76 240 aaPredicted RBP11.84□□□□□ -0.51
TFF1-201ENST00000291527 U2AF1Q01081 240 aaKnown RBP eCLIP11.84□□□□□ -0.51
TFF1-201ENST00000291527 TTLL6Q8N841 843 aa11.84□□□□□ -0.51
TFF1-201ENST00000291527 ZNF622Q969S3 477 aaKnown RBP eCLIP11.84□□□□□ -0.51
TFF1-201ENST00000291527 FMNL2Q96PY5 1086 aa11.84□□□□□ -0.51
TFF1-201ENST00000291527 TNRC6CQ9HCJ0 1690 aaKnown RBP11.84□□□□□ -0.51
TFF1-201ENST00000291527 IFFO2Q5TF58 517 aa11.83□□□□□ -0.52
TFF1-201ENST00000291527 OLFM4Q6UX06 510 aa11.83□□□□□ -0.52
TFF1-201ENST00000291527 THUMPD2Q9BTF0 503 aaKnown RBP11.83□□□□□ -0.52
TFF1-201ENST00000291527 H0YIN7 160 aa11.82□□□□□ -0.52
TFF1-201ENST00000291527 IL6STP40189 918 aaPredicted RBP11.82□□□□□ -0.52
TFF1-201ENST00000291527 APLP1P51693 650 aa11.82□□□□□ -0.52
TFF1-201ENST00000291527 HLFQ16534 295 aa11.82□□□□□ -0.52
TFF1-201ENST00000291527 DZIP3Q86Y13 1208 aaKnown RBP11.82□□□□□ -0.52
TFF1-201ENST00000291527 RBM46Q8TBY0 533 aaKnown RBP11.82□□□□□ -0.52
TFF1-201ENST00000291527 NUP98P52948 1817 aa11.81□□□□□ -0.52
TFF1-201ENST00000291527 LMNB1P20700 586 aa11.81□□□□□ -0.52
TFF1-201ENST00000291527 BRIP1Q9BX63 1249 aa11.81□□□□□ -0.52
TFF1-201ENST00000291527 KDM3BQ7LBC6 1761 aa11.81□□□□□ -0.52
TFF1-201ENST00000291527 ARFGEF2Q9Y6D5 1785 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms