RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 TTC5Q8N0Z6 440 aa12.77□□□□□ -0.37
HMHB1-201ENST00000289448 BCL2L12Q9HB09 334 aa12.77□□□□□ -0.37
HMHB1-201ENST00000289448 UBR2Q8IWV8 1755 aa12.76□□□□□ -0.37
HMHB1-201ENST00000289448 KIF13BQ9NQT8 1826 aa12.76□□□□□ -0.37
HMHB1-201ENST00000289448 POLRMTO00411 1230 aaKnown RBP12.76□□□□□ -0.37
HMHB1-201ENST00000289448 ZPR1O75312 459 aa12.76□□□□□ -0.37
HMHB1-201ENST00000289448 CANXP27824 592 aaKnown RBP12.76□□□□□ -0.37
HMHB1-201ENST00000289448 MCM10Q7L590 875 aa12.76□□□□□ -0.37
HMHB1-201ENST00000289448 NARFQ9UHQ1 456 aa12.76□□□□□ -0.37
HMHB1-201ENST00000289448 COL15A1P39059 1388 aa12.76□□□□□ -0.37
HMHB1-201ENST00000289448 EIF5P55010 431 aaKnown RBP12.75□□□□□ -0.37
HMHB1-201ENST00000289448 DCTN1Q14203 1278 aa12.75□□□□□ -0.37
HMHB1-201ENST00000289448 HEG1Q9ULI3 1381 aa12.75□□□□□ -0.37
HMHB1-201ENST00000289448 SIPA1L3O60292 1781 aaPredicted RBP12.74□□□□□ -0.37
HMHB1-201ENST00000289448 N4BP2Q86UW6 1770 aaPredicted RBP12.74□□□□□ -0.37
HMHB1-201ENST00000289448 ATP10DQ9P241 1426 aa12.74□□□□□ -0.37
HMHB1-201ENST00000289448 ADCY9O60503 1353 aa12.74□□□□□ -0.37
HMHB1-201ENST00000289448 BTBD11A6QL63 1104 aa12.74□□□□□ -0.37
HMHB1-201ENST00000289448 STARD3NLO95772 234 aa12.74□□□□□ -0.37
HMHB1-201ENST00000289448 ZEB1P37275 1124 aaPredicted RBP12.74□□□□□ -0.37
HMHB1-201ENST00000289448 NFIXQ14938 502 aa12.74□□□□□ -0.37
HMHB1-201ENST00000289448 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
HMHB1-201ENST00000289448 PRAMEF22A3QJZ6 481 aa12.73□□□□□ -0.37
HMHB1-201ENST00000289448 A1BGP04217 495 aa12.73□□□□□ -0.37
HMHB1-201ENST00000289448 FMNL2Q96PY5 1086 aa12.73□□□□□ -0.37
HMHB1-201ENST00000289448 CHRNA5P30532 468 aa12.72□□□□□ -0.37
HMHB1-201ENST00000289448 C1QTNF8P60827 252 aa12.72□□□□□ -0.37
HMHB1-201ENST00000289448 PLEKHF1Q96S99 279 aa12.72□□□□□ -0.37
HMHB1-201ENST00000289448 GIGYF1O75420 1035 aaPredicted RBP12.71□□□□□ -0.37
HMHB1-201ENST00000289448 RTF1Q92541 710 aaKnown RBP12.71□□□□□ -0.37
HMHB1-201ENST00000289448 TEX13AQ9BXU3 409 aaPredicted RBP12.71□□□□□ -0.37
HMHB1-201ENST00000289448 TBC1D2BQ9UPU7 963 aa12.71□□□□□ -0.37
HMHB1-201ENST00000289448 USP16Q9Y5T5 823 aa12.71□□□□□ -0.37
HMHB1-201ENST00000289448 HTATSF1O43719 755 aaKnown RBP12.7□□□□□ -0.38
HMHB1-201ENST00000289448 PIP4K2AP48426 406 aaPredicted RBP12.7□□□□□ -0.38
HMHB1-201ENST00000289448 ARHGAP27Q6ZUM4 889 aa12.7□□□□□ -0.38
HMHB1-201ENST00000289448 ZNF526Q8TF50 670 aaPredicted RBP12.7□□□□□ -0.38
HMHB1-201ENST00000289448 MIS18AQ9NYP9 233 aa12.7□□□□□ -0.38
HMHB1-201ENST00000289448 PIM2Q9P1W9 311 aa12.7□□□□□ -0.38
HMHB1-201ENST00000289448 A0A087WZG4 1122 aa12.69□□□□□ -0.38
HMHB1-201ENST00000289448 SERPINB2P05120 415 aa12.69□□□□□ -0.38
HMHB1-201ENST00000289448 IL6STP40189 918 aaPredicted RBP12.69□□□□□ -0.38
HMHB1-201ENST00000289448 DDX10Q13206 875 aaKnown RBP12.69□□□□□ -0.38
HMHB1-201ENST00000289448 TBC1D9BQ66K14 1250 aa12.69□□□□□ -0.38
HMHB1-201ENST00000289448 BICDL1Q6ZP65 573 aa12.69□□□□□ -0.38
HMHB1-201ENST00000289448 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
HMHB1-201ENST00000289448 CARMIL3Q8ND23 1372 aa12.69□□□□□ -0.38
HMHB1-201ENST00000289448 BRCA1P38398 1863 aaKnown RBP12.68□□□□□ -0.38
HMHB1-201ENST00000289448 CAMTA2O94983 1202 aa12.68□□□□□ -0.38
HMHB1-201ENST00000289448 DALRD3Q5D0E6 543 aaKnown RBP12.68□□□□□ -0.38
HMHB1-201ENST00000289448 GPBP1L1Q9HC44 474 aaPredicted RBP12.68□□□□□ -0.38
HMHB1-201ENST00000289448 SNRPA1P09661 255 aaKnown RBP12.67□□□□□ -0.38
HMHB1-201ENST00000289448 TAF7Q15545 349 aaPredicted RBP12.67□□□□□ -0.38
HMHB1-201ENST00000289448 THUMPD2Q9BTF0 503 aaKnown RBP12.67□□□□□ -0.38
HMHB1-201ENST00000289448 NRXN2Q9P2S2 1712 aa12.67□□□□□ -0.38
HMHB1-201ENST00000289448 AFDNP55196 1824 aaKnown RBP12.67□□□□□ -0.38
HMHB1-201ENST00000289448 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
HMHB1-201ENST00000289448 NFE2L2Q16236 605 aa12.66□□□□□ -0.38
HMHB1-201ENST00000289448 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
HMHB1-201ENST00000289448 CCDC24Q8N4L8 307 aa12.66□□□□□ -0.38
HMHB1-201ENST00000289448 NBPF15Q8N660 670 aa12.66□□□□□ -0.38
HMHB1-201ENST00000289448 SENP3-EIF4A1A0A087X0R7 540 aa12.65□□□□□ -0.38
HMHB1-201ENST00000289448 RALBP1Q15311 655 aa12.65□□□□□ -0.38
HMHB1-201ENST00000289448 DZIP3Q86Y13 1208 aaKnown RBP12.65□□□□□ -0.38
HMHB1-201ENST00000289448 KIF3CO14782 793 aa12.64□□□□□ -0.39
HMHB1-201ENST00000289448 C9orf131Q5VYM1 1079 aa12.64□□□□□ -0.39
HMHB1-201ENST00000289448 PRR5LQ6MZQ0 368 aa12.64□□□□□ -0.39
HMHB1-201ENST00000289448 C2CD5Q86YS7 1000 aa12.64□□□□□ -0.39
HMHB1-201ENST00000289448 SCN7AQ01118 1682 aa12.64□□□□□ -0.39
HMHB1-201ENST00000289448 ARFGEF1Q9Y6D6 1849 aa12.63□□□□□ -0.39
HMHB1-201ENST00000289448 SETDB2Q96T68 719 aa12.63□□□□□ -0.39
HMHB1-201ENST00000289448 H0YIN7 160 aa12.62□□□□□ -0.39
HMHB1-201ENST00000289448 NEFMP07197 916 aa12.62□□□□□ -0.39
HMHB1-201ENST00000289448 PRELPP51888 382 aa12.62□□□□□ -0.39
HMHB1-201ENST00000289448 EIF4A1P60842 406 aaKnown RBP12.62□□□□□ -0.39
HMHB1-201ENST00000289448 RASSF7Q02833 373 aa12.62□□□□□ -0.39
HMHB1-201ENST00000289448 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
HMHB1-201ENST00000289448 TTLL6Q8N841 843 aa12.62□□□□□ -0.39
HMHB1-201ENST00000289448 BRIP1Q9BX63 1249 aa12.62□□□□□ -0.39
HMHB1-201ENST00000289448 DLG5Q8TDM6 1919 aa12.62□□□□□ -0.39
HMHB1-201ENST00000289448 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
HMHB1-201ENST00000289448 PNISRQ8TF01 805 aaKnown RBP12.61□□□□□ -0.39
HMHB1-201ENST00000289448 PNNQ9H307 717 aaKnown RBP12.61□□□□□ -0.39
HMHB1-201ENST00000289448 RNF181Q9P0P0 153 aa12.61□□□□□ -0.39
HMHB1-201ENST00000289448 MYBBP1AQ9BQG0 1328 aaKnown RBP12.61□□□□□ -0.39
HMHB1-201ENST00000289448 ANKRD31Q8N7Z5 1873 aa12.6□□□□□ -0.39
HMHB1-201ENST00000289448 RIPK4P57078 832 aa12.6□□□□□ -0.39
HMHB1-201ENST00000289448 HLFQ16534 295 aa12.6□□□□□ -0.39
HMHB1-201ENST00000289448 CLEC4GQ6UXB4 293 aa12.6□□□□□ -0.39
HMHB1-201ENST00000289448 CNBD1Q8NA66 436 aa12.6□□□□□ -0.39
HMHB1-201ENST00000289448 NMRK2Q9NPI5 230 aa12.6□□□□□ -0.39
HMHB1-201ENST00000289448 PDE6BP35913 854 aa12.59□□□□□ -0.39
HMHB1-201ENST00000289448 TMPOP42166 694 aaKnown RBP12.59□□□□□ -0.39
HMHB1-201ENST00000289448 CCDC146Q8IYE0 955 aa12.59□□□□□ -0.39
HMHB1-201ENST00000289448 ZNF622Q969S3 477 aaKnown RBP eCLIP12.59□□□□□ -0.39
HMHB1-201ENST00000289448 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
HMHB1-201ENST00000289448 BCORQ6W2J9 1755 aa12.58□□□□□ -0.39
HMHB1-201ENST00000289448 KDM3BQ7LBC6 1761 aa12.58□□□□□ -0.39
HMHB1-201ENST00000289448 DLEC1Q9Y238 1755 aa12.58□□□□□ -0.39
HMHB1-201ENST00000289448 NFKBIEO00221 500 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms