RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 SLC39A6Q13433 755 aa20.43■□□□□ 0.86
PDE6D-201ENST00000287600 MTHFSDQ2M296 383 aaKnown RBP20.43■□□□□ 0.86
PDE6D-201ENST00000287600 UBR2Q8IWV8 1755 aa20.42■□□□□ 0.86
PDE6D-201ENST00000287600 ZPR1O75312 459 aa20.42■□□□□ 0.86
PDE6D-201ENST00000287600 PPP2R1AP30153 589 aa20.42■□□□□ 0.86
PDE6D-201ENST00000287600 DDR1Q08345 913 aa20.42■□□□□ 0.86
PDE6D-201ENST00000287600 ARHGAP27Q6ZUM4 889 aa20.42■□□□□ 0.86
PDE6D-201ENST00000287600 COL3A1P02461 1466 aaPredicted RBP20.42■□□□□ 0.86
PDE6D-201ENST00000287600 SOS1Q07889 1333 aaPredicted RBP20.41■□□□□ 0.86
PDE6D-201ENST00000287600 COL15A1P39059 1388 aa20.4■□□□□ 0.86
PDE6D-201ENST00000287600 USPL1Q5W0Q7 1092 aa20.4■□□□□ 0.86
PDE6D-201ENST00000287600 U2SURPO15042 1029 aaKnown RBP20.39■□□□□ 0.85
PDE6D-201ENST00000287600 CYP19A1P11511 503 aaPredicted RBP20.39■□□□□ 0.85
PDE6D-201ENST00000287600 CFAP53Q96M91 514 aa20.39■□□□□ 0.85
PDE6D-201ENST00000287600 PIM2Q9P1W9 311 aa20.39■□□□□ 0.85
PDE6D-201ENST00000287600 POLRMTO00411 1230 aaKnown RBP20.38■□□□□ 0.85
PDE6D-201ENST00000287600 KIF3CO14782 793 aa20.38■□□□□ 0.85
PDE6D-201ENST00000287600 HSPA6P17066 643 aa20.38■□□□□ 0.85
PDE6D-201ENST00000287600 KCNA3P22001 575 aa20.38■□□□□ 0.85
PDE6D-201ENST00000287600 ZBTB1Q9Y2K1 713 aa20.38■□□□□ 0.85
PDE6D-201ENST00000287600 AFDNP55196 1824 aaKnown RBP20.38■□□□□ 0.85
PDE6D-201ENST00000287600 DALRD3Q5D0E6 543 aaKnown RBP20.37■□□□□ 0.85
PDE6D-201ENST00000287600 TTC5Q8N0Z6 440 aa20.37■□□□□ 0.85
PDE6D-201ENST00000287600 VSIG10Q8N0Z9 540 aa20.36■□□□□ 0.85
PDE6D-201ENST00000287600 ZNF316A6NFI3 1004 aaPredicted RBP20.35■□□□□ 0.85
PDE6D-201ENST00000287600 TM4SF1P30408 202 aa20.35■□□□□ 0.85
PDE6D-201ENST00000287600 CHRNA5P30532 468 aa20.35■□□□□ 0.85
PDE6D-201ENST00000287600 NARFQ9UHQ1 456 aa20.35■□□□□ 0.85
PDE6D-201ENST00000287600 SIPA1L3O60292 1781 aaPredicted RBP20.35■□□□□ 0.85
PDE6D-201ENST00000287600 NRXN2Q9P2S2 1712 aa20.35■□□□□ 0.85
PDE6D-201ENST00000287600 TEFQ10587 303 aa20.34■□□□□ 0.85
PDE6D-201ENST00000287600 GAS2L2Q8NHY3 880 aa20.34■□□□□ 0.85
PDE6D-201ENST00000287600 CANXP27824 592 aaKnown RBP20.33■□□□□ 0.85
PDE6D-201ENST00000287600 NFIXQ14938 502 aa20.33■□□□□ 0.85
PDE6D-201ENST00000287600 RALBP1Q15311 655 aa20.33■□□□□ 0.85
PDE6D-201ENST00000287600 C9orf131Q5VYM1 1079 aa20.33■□□□□ 0.85
PDE6D-201ENST00000287600 DLEC1Q9Y238 1755 aa20.33■□□□□ 0.84
PDE6D-201ENST00000287600 GNAT3A8MTJ3 354 aa20.32■□□□□ 0.84
PDE6D-201ENST00000287600 SCN7AQ01118 1682 aa20.32■□□□□ 0.84
PDE6D-201ENST00000287600 STARD3NLO95772 234 aa20.31■□□□□ 0.84
PDE6D-201ENST00000287600 NUDCQ9Y266 331 aa20.31■□□□□ 0.84
PDE6D-201ENST00000287600 BCL2L12Q9HB09 334 aa20.3■□□□□ 0.84
PDE6D-201ENST00000287600 NMRK2Q9NPI5 230 aa20.3■□□□□ 0.84
PDE6D-201ENST00000287600 RNF181Q9P0P0 153 aa20.3■□□□□ 0.84
PDE6D-201ENST00000287600 HEG1Q9ULI3 1381 aa20.3■□□□□ 0.84
PDE6D-201ENST00000287600 TOMM70O94826 608 aa20.29■□□□□ 0.84
PDE6D-201ENST00000287600 SERPINB2P05120 415 aa20.29■□□□□ 0.84
PDE6D-201ENST00000287600 ZNF790Q6PG37 636 aa20.29■□□□□ 0.84
PDE6D-201ENST00000287600 IL17REQ8NFR9 667 aa20.29■□□□□ 0.84
PDE6D-201ENST00000287600 ZNF496Q96IT1 587 aaPredicted RBP20.29■□□□□ 0.84
PDE6D-201ENST00000287600 FOXD4L1Q9NU39 408 aa20.29■□□□□ 0.84
PDE6D-201ENST00000287600 ZNF330Q9Y3S2 320 aaPredicted RBP20.29■□□□□ 0.84
PDE6D-201ENST00000287600 SBF1O95248 1867 aa20.28■□□□□ 0.84
PDE6D-201ENST00000287600 A0A087WZG4 1122 aa20.28■□□□□ 0.84
PDE6D-201ENST00000287600 TNRC6CQ9HCJ0 1690 aaKnown RBP20.27■□□□□ 0.84
PDE6D-201ENST00000287600 U2AF1L5P0DN76 240 aaPredicted RBP20.27■□□□□ 0.84
PDE6D-201ENST00000287600 PRKAR2BP31323 418 aa20.27■□□□□ 0.84
PDE6D-201ENST00000287600 U2AF1Q01081 240 aaKnown RBP eCLIP20.27■□□□□ 0.84
PDE6D-201ENST00000287600 BICDL1Q6ZP65 573 aa20.27■□□□□ 0.84
PDE6D-201ENST00000287600 CEP350Q5VT06 3117 aa20.27■□□□□ 0.84
PDE6D-201ENST00000287600 CARMIL3Q8ND23 1372 aa20.26■□□□□ 0.83
PDE6D-201ENST00000287600 EIF5P55010 431 aaKnown RBP20.26■□□□□ 0.83
PDE6D-201ENST00000287600 C16orf71Q8IYS4 520 aaPredicted RBP20.26■□□□□ 0.83
PDE6D-201ENST00000287600 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
PDE6D-201ENST00000287600 KDM2BQ8NHM5 1336 aa20.26■□□□□ 0.83
PDE6D-201ENST00000287600 CEMIPQ8WUJ3 1361 aa20.25■□□□□ 0.83
PDE6D-201ENST00000287600 ZBTB22O15209 634 aa20.25■□□□□ 0.83
PDE6D-201ENST00000287600 RASSF7Q02833 373 aa20.25■□□□□ 0.83
PDE6D-201ENST00000287600 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
PDE6D-201ENST00000287600 APLP1P51693 650 aa20.24■□□□□ 0.83
PDE6D-201ENST00000287600 NPM2Q86SE8 214 aaKnown RBP20.24■□□□□ 0.83
PDE6D-201ENST00000287600 C2CD5Q86YS7 1000 aa20.24■□□□□ 0.83
PDE6D-201ENST00000287600 RSPH6AQ9H0K4 717 aa20.24■□□□□ 0.83
PDE6D-201ENST00000287600 TIAM2Q8IVF5 1701 aa20.24■□□□□ 0.83
PDE6D-201ENST00000287600 ANKRD31Q8N7Z5 1873 aa20.24■□□□□ 0.83
PDE6D-201ENST00000287600 BCORQ6W2J9 1755 aa20.23■□□□□ 0.83
PDE6D-201ENST00000287600 BTBD11A6QL63 1104 aa20.23■□□□□ 0.83
PDE6D-201ENST00000287600 PHACTR3Q96KR7 559 aa20.23■□□□□ 0.83
PDE6D-201ENST00000287600 MYBBP1AQ9BQG0 1328 aaKnown RBP20.23■□□□□ 0.83
PDE6D-201ENST00000287600 COL11A2P13942 1736 aaPredicted RBP20.22■□□□□ 0.83
PDE6D-201ENST00000287600 IL6STP40189 918 aaPredicted RBP20.22■□□□□ 0.83
PDE6D-201ENST00000287600 TBC1D9BQ66K14 1250 aa20.22■□□□□ 0.83
PDE6D-201ENST00000287600 TTLL6Q8N841 843 aa20.22■□□□□ 0.83
PDE6D-201ENST00000287600 PRKRIP1Q9H875 184 aaPredicted RBP20.22■□□□□ 0.83
PDE6D-201ENST00000287600 TBC1D2BQ9UPU7 963 aa20.22■□□□□ 0.83
PDE6D-201ENST00000287600 WDR90Q96KV7 1748 aa20.22■□□□□ 0.83
PDE6D-201ENST00000287600 H0YIN7 160 aa20.21■□□□□ 0.83
PDE6D-201ENST00000287600 RBM46Q8TBY0 533 aaKnown RBP20.21■□□□□ 0.83
PDE6D-201ENST00000287600 KCNQ3O43525 872 aa20.19■□□□□ 0.82
PDE6D-201ENST00000287600 A1BGP04217 495 aa20.19■□□□□ 0.82
PDE6D-201ENST00000287600 RTF1Q92541 710 aaKnown RBP20.19■□□□□ 0.82
PDE6D-201ENST00000287600 CCDC88AQ3V6T2 1871 aa20.19■□□□□ 0.82
PDE6D-201ENST00000287600 ZC3H4Q9UPT8 1303 aaKnown RBP20.19■□□□□ 0.82
PDE6D-201ENST00000287600 NPHP1O15259 732 aa20.18■□□□□ 0.82
PDE6D-201ENST00000287600 LMNB1P20700 586 aa20.18■□□□□ 0.82
PDE6D-201ENST00000287600 RRAGCQ9HB90 399 aa20.18■□□□□ 0.82
PDE6D-201ENST00000287600 CACNA1SQ13698 1873 aa20.18■□□□□ 0.82
PDE6D-201ENST00000287600 PDE6BP35913 854 aa20.17■□□□□ 0.82
PDE6D-201ENST00000287600 PRR5LQ6MZQ0 368 aa20.17■□□□□ 0.82
PDE6D-201ENST00000287600 MCM10Q7L590 875 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms