RNA–Protein interactions for RNA: ENST00000286758.4

CXCL13-201, Transcript of C-X-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL13, Length 1,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13-201ENST00000286758 SAMD9Q5K651 1589 aa12.91□□□□□ -0.34
CXCL13-201ENST00000286758 IPO8O15397 1037 aaKnown RBP12.91□□□□□ -0.34
CXCL13-201ENST00000286758 ZNF526Q8TF50 670 aaPredicted RBP12.91□□□□□ -0.34
CXCL13-201ENST00000286758 LHX6Q9UPM6 363 aa12.91□□□□□ -0.34
CXCL13-201ENST00000286758 NUB1Q9Y5A7 615 aa12.91□□□□□ -0.34
CXCL13-201ENST00000286758 ZNF608Q9ULD9 1512 aaPredicted RBP12.91□□□□□ -0.34
CXCL13-201ENST00000286758 CD151P48509 253 aa12.9□□□□□ -0.34
CXCL13-201ENST00000286758 KLHL23Q8NBE8 558 aa12.9□□□□□ -0.34
CXCL13-201ENST00000286758 GIMAP7Q8NHV1 300 aa12.9□□□□□ -0.34
CXCL13-201ENST00000286758 CLUAP1Q96AJ1 413 aa12.9□□□□□ -0.34
CXCL13-201ENST00000286758 PCDHGA4Q9Y5G9 962 aa12.9□□□□□ -0.34
CXCL13-201ENST00000286758 IGF1RP08069 1367 aa12.9□□□□□ -0.34
CXCL13-201ENST00000286758 PARD3Q8TEW0 1356 aa12.9□□□□□ -0.34
CXCL13-201ENST00000286758 CCDC171Q6TFL3 1326 aa12.89□□□□□ -0.35
CXCL13-201ENST00000286758 KIF14Q15058 1648 aa12.89□□□□□ -0.35
CXCL13-201ENST00000286758 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
CXCL13-201ENST00000286758 PLIN1O60240 522 aa12.89□□□□□ -0.35
CXCL13-201ENST00000286758 MAGEA8P43361 318 aa12.89□□□□□ -0.35
CXCL13-201ENST00000286758 CDC37Q16543 378 aaPredicted RBP12.89□□□□□ -0.35
CXCL13-201ENST00000286758 TMC2Q8TDI7 906 aa12.89□□□□□ -0.35
CXCL13-201ENST00000286758 DNAAF4Q8WXU2 420 aa12.89□□□□□ -0.35
CXCL13-201ENST00000286758 LARP6Q9BRS8 491 aaKnown RBP12.89□□□□□ -0.35
CXCL13-201ENST00000286758 TRAK1Q9UPV9 953 aa12.89□□□□□ -0.35
CXCL13-201ENST00000286758 ABCC10Q5T3U5 1492 aa12.89□□□□□ -0.35
CXCL13-201ENST00000286758 PTPRCP08575 1304 aa12.88□□□□□ -0.35
CXCL13-201ENST00000286758 EIF5P55010 431 aaKnown RBP12.88□□□□□ -0.35
CXCL13-201ENST00000286758 CORO7P57737 925 aa12.88□□□□□ -0.35
CXCL13-201ENST00000286758 TSGA10IPQ3SY00 556 aa12.88□□□□□ -0.35
CXCL13-201ENST00000286758 CCDC186Q7Z3E2 898 aa12.88□□□□□ -0.35
CXCL13-201ENST00000286758 SKAP1Q86WV1 359 aa12.88□□□□□ -0.35
CXCL13-201ENST00000286758 MPNDQ8N594 471 aa12.88□□□□□ -0.35
CXCL13-201ENST00000286758 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
CXCL13-201ENST00000286758 RWDD1Q9H446 243 aaPredicted RBP12.88□□□□□ -0.35
CXCL13-201ENST00000286758 AXIN2Q9Y2T1 843 aa12.88□□□□□ -0.35
CXCL13-201ENST00000286758 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.88□□□□□ -0.35
CXCL13-201ENST00000286758 NAIPQ13075 1403 aa12.88□□□□□ -0.35
CXCL13-201ENST00000286758 RPRD2Q5VT52 1461 aaKnown RBP12.87□□□□□ -0.35
CXCL13-201ENST00000286758 A0A087WUV0 522 aaPredicted RBP12.87□□□□□ -0.35
CXCL13-201ENST00000286758 ACTN2P35609 894 aa12.87□□□□□ -0.35
CXCL13-201ENST00000286758 NEDD9Q14511 834 aa12.87□□□□□ -0.35
CXCL13-201ENST00000286758 CRYMQ14894 314 aa12.87□□□□□ -0.35
CXCL13-201ENST00000286758 RBBP5Q15291 538 aaKnown RBP12.87□□□□□ -0.35
CXCL13-201ENST00000286758 TEX11Q8IYF3 940 aa12.87□□□□□ -0.35
CXCL13-201ENST00000286758 TMTC2Q8N394 836 aa12.87□□□□□ -0.35
CXCL13-201ENST00000286758 TRERF1Q96PN7 1200 aa12.87□□□□□ -0.35
CXCL13-201ENST00000286758 HCSTQ9UBK5 93 aa12.87□□□□□ -0.35
CXCL13-201ENST00000286758 HMGXB3Q12766 1538 aa12.87□□□□□ -0.35
CXCL13-201ENST00000286758 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
CXCL13-201ENST00000286758 TEX14Q8IWB6 1497 aa12.86□□□□□ -0.35
CXCL13-201ENST00000286758 NEMFO60524 1076 aa12.86□□□□□ -0.35
CXCL13-201ENST00000286758 CYP2E1P05181 493 aaPredicted RBP12.86□□□□□ -0.35
CXCL13-201ENST00000286758 PLCB2Q00722 1185 aa12.86□□□□□ -0.35
CXCL13-201ENST00000286758 KMT5BQ4FZB7 885 aa12.86□□□□□ -0.35
CXCL13-201ENST00000286758 DNAJC21Q5F1R6 531 aaKnown RBP12.86□□□□□ -0.35
CXCL13-201ENST00000286758 BORCS6Q96GS4 357 aa12.86□□□□□ -0.35
CXCL13-201ENST00000286758 TMX1Q9H3N1 280 aa12.86□□□□□ -0.35
CXCL13-201ENST00000286758 SPATS2LQ9NUQ6 558 aaKnown RBP12.86□□□□□ -0.35
CXCL13-201ENST00000286758 PLA2G2EQ9NZK7 142 aa12.86□□□□□ -0.35
CXCL13-201ENST00000286758 H2AFXP16104 143 aaPredicted RBP12.85□□□□□ -0.35
CXCL13-201ENST00000286758 RDXP35241 583 aaKnown RBP12.85□□□□□ -0.35
CXCL13-201ENST00000286758 PRPHP41219 470 aa12.85□□□□□ -0.35
CXCL13-201ENST00000286758 HSP90B2PQ58FF3 399 aa12.85□□□□□ -0.35
CXCL13-201ENST00000286758 FILIP1Q7Z7B0 1213 aa12.85□□□□□ -0.35
CXCL13-201ENST00000286758 PACS2Q86VP3 889 aa12.85□□□□□ -0.35
CXCL13-201ENST00000286758 MIEF2Q96C03 454 aa12.85□□□□□ -0.35
CXCL13-201ENST00000286758 GNL3LQ9NVN8 582 aaKnown RBP12.85□□□□□ -0.35
CXCL13-201ENST00000286758 SMC3Q9UQE7 1217 aa12.85□□□□□ -0.35
CXCL13-201ENST00000286758 KDM5CP41229 1560 aa12.85□□□□□ -0.35
CXCL13-201ENST00000286758 PPFIA2O75334 1257 aa12.84□□□□□ -0.35
CXCL13-201ENST00000286758 RBM6P78332 1123 aaKnown RBP12.84□□□□□ -0.35
CXCL13-201ENST00000286758 CCDC27Q2M243 656 aa12.84□□□□□ -0.35
CXCL13-201ENST00000286758 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
CXCL13-201ENST00000286758 ZSCAN16Q9H4T2 348 aaPredicted RBP12.84□□□□□ -0.35
CXCL13-201ENST00000286758 DIP2BQ9P265 1576 aa12.83□□□□□ -0.36
CXCL13-201ENST00000286758 FHOD3Q2V2M9 1422 aa12.83□□□□□ -0.36
CXCL13-201ENST00000286758 PSDA5PKW4 1024 aaPredicted RBP12.83□□□□□ -0.36
CXCL13-201ENST00000286758 TRIM66O15016 1216 aa12.83□□□□□ -0.36
CXCL13-201ENST00000286758 GCFC2P16383 781 aaKnown RBP12.83□□□□□ -0.36
CXCL13-201ENST00000286758 GYS2P54840 703 aa12.83□□□□□ -0.36
CXCL13-201ENST00000286758 DHX8Q14562 1220 aaKnown RBP12.83□□□□□ -0.36
CXCL13-201ENST00000286758 MCTP1Q6DN14 999 aa12.83□□□□□ -0.36
CXCL13-201ENST00000286758 TCP11Q8WWU5 503 aa12.83□□□□□ -0.36
CXCL13-201ENST00000286758 TATDN2Q93075 761 aa12.83□□□□□ -0.36
CXCL13-201ENST00000286758 UBXN6Q9BZV1 441 aa12.83□□□□□ -0.36
CXCL13-201ENST00000286758 VEZTQ9HBM0 779 aa12.83□□□□□ -0.36
CXCL13-201ENST00000286758 CPSF2Q9P2I0 782 aaKnown RBP12.83□□□□□ -0.36
CXCL13-201ENST00000286758 SPAG9O60271 1321 aaKnown RBP12.83□□□□□ -0.36
CXCL13-201ENST00000286758 PTPRGP23470 1445 aa12.82□□□□□ -0.36
CXCL13-201ENST00000286758 SLU7O95391 586 aaKnown RBP12.82□□□□□ -0.36
CXCL13-201ENST00000286758 PAX7P23759 505 aa12.82□□□□□ -0.36
CXCL13-201ENST00000286758 SSFA2P28290 1259 aa12.82□□□□□ -0.36
CXCL13-201ENST00000286758 FAM50AQ14320 339 aaKnown RBP12.82□□□□□ -0.36
CXCL13-201ENST00000286758 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
CXCL13-201ENST00000286758 GBP6Q6ZN66 633 aa12.82□□□□□ -0.36
CXCL13-201ENST00000286758 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.82□□□□□ -0.36
CXCL13-201ENST00000286758 ANKRD18AQ8IVF6 992 aa12.82□□□□□ -0.36
CXCL13-201ENST00000286758 GPT2Q8TD30 523 aa12.82□□□□□ -0.36
CXCL13-201ENST00000286758 CLIP2Q9UDT6 1046 aa12.82□□□□□ -0.36
CXCL13-201ENST00000286758 RPS6KL1Q9Y6S9 549 aa12.82□□□□□ -0.36
CXCL13-201ENST00000286758 KDRP35968 1356 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms