RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 WDR97A6NE52 1622 aa22.69■■□□□ 1.22
LSM11-201ENST00000286307 FILIP1LQ4L180 1135 aa22.68■■□□□ 1.22
LSM11-201ENST00000286307 PPP4R3AQ6IN85 833 aa22.68■■□□□ 1.22
LSM11-201ENST00000286307 SNRKQ9NRH2 765 aa22.68■■□□□ 1.22
LSM11-201ENST00000286307 ANKRD13DQ6ZTN6 518 aa22.68■■□□□ 1.22
LSM11-201ENST00000286307 USP21Q9UK80 565 aa22.68■■□□□ 1.22
LSM11-201ENST00000286307 SPTY2D1Q68D10 685 aaPredicted RBP22.68■■□□□ 1.22
LSM11-201ENST00000286307 DZIP3Q86Y13 1208 aaKnown RBP22.68■■□□□ 1.22
LSM11-201ENST00000286307 EIF4G3O43432 1585 aaKnown RBP22.68■■□□□ 1.22
LSM11-201ENST00000286307 GNPATO15228 680 aa22.68■■□□□ 1.22
LSM11-201ENST00000286307 U3KPZ7 1027 aaPredicted RBP22.68■■□□□ 1.22
LSM11-201ENST00000286307 KRT32Q14532 448 aa22.67■■□□□ 1.22
LSM11-201ENST00000286307 ZRANB1Q9UGI0 708 aa22.67■■□□□ 1.22
LSM11-201ENST00000286307 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
LSM11-201ENST00000286307 STIM1Q13586 685 aa22.67■■□□□ 1.22
LSM11-201ENST00000286307 SMC2O95347 1197 aa22.67■■□□□ 1.22
LSM11-201ENST00000286307 CCDC82Q8N4S0 544 aa22.67■■□□□ 1.22
LSM11-201ENST00000286307 WASF1Q92558 559 aa22.67■■□□□ 1.22
LSM11-201ENST00000286307 ABCC10Q5T3U5 1492 aa22.67■■□□□ 1.22
LSM11-201ENST00000286307 IQCA1Q86XH1 822 aa22.67■■□□□ 1.22
LSM11-201ENST00000286307 NYXQ9GZU5 481 aa22.67■■□□□ 1.22
LSM11-201ENST00000286307 VEZTQ9HBM0 779 aa22.67■■□□□ 1.22
LSM11-201ENST00000286307 FAM13BQ9NYF5 915 aa22.67■■□□□ 1.22
LSM11-201ENST00000286307 PI4KAP2A4QPH2 592 aa22.66■■□□□ 1.22
LSM11-201ENST00000286307 PI4KAP1Q8N8J0 262 aa22.66■■□□□ 1.22
LSM11-201ENST00000286307 GLRX3O76003 335 aaKnown RBP22.66■■□□□ 1.22
LSM11-201ENST00000286307 LMOD1P29536 600 aaPredicted RBP22.66■■□□□ 1.22
LSM11-201ENST00000286307 NF2P35240 595 aa22.66■■□□□ 1.22
LSM11-201ENST00000286307 RIMBP2O15034 1052 aa22.66■■□□□ 1.22
LSM11-201ENST00000286307 SLFN5Q08AF3 891 aa22.66■■□□□ 1.22
LSM11-201ENST00000286307 SSH1Q8WYL5 1049 aa22.66■■□□□ 1.22
LSM11-201ENST00000286307 UTP14AQ9BVJ6 771 aaKnown RBP22.66■■□□□ 1.22
LSM11-201ENST00000286307 TRMT1LQ7Z2T5 733 aaKnown RBP22.66■■□□□ 1.22
LSM11-201ENST00000286307 VTI1AQ96AJ9 217 aa22.66■■□□□ 1.22
LSM11-201ENST00000286307 IQSEC3Q9UPP2 1182 aaPredicted RBP22.66■■□□□ 1.22
LSM11-201ENST00000286307 MX1P20591 662 aa22.65■■□□□ 1.22
LSM11-201ENST00000286307 TRAPPC3LQ5T215 181 aa22.65■■□□□ 1.22
LSM11-201ENST00000286307 LARP1BQ659C4 914 aaKnown RBP22.65■■□□□ 1.22
LSM11-201ENST00000286307 GJA3Q9Y6H8 435 aa22.65■■□□□ 1.22
LSM11-201ENST00000286307 CTCFLQ8NI51 663 aaPredicted RBP22.65■■□□□ 1.22
LSM11-201ENST00000286307 DDX11Q96FC9 970 aa22.65■■□□□ 1.22
LSM11-201ENST00000286307 FANCIQ9NVI1 1328 aa22.65■■□□□ 1.22
LSM11-201ENST00000286307 XAGE3Q8WTP9 111 aa22.65■■□□□ 1.22
LSM11-201ENST00000286307 DDX17Q92841 729 aaKnown RBP22.65■■□□□ 1.22
LSM11-201ENST00000286307 VAT1LQ9HCJ6 419 aa22.64■■□□□ 1.22
LSM11-201ENST00000286307 GCP02774 474 aa22.64■■□□□ 1.22
LSM11-201ENST00000286307 CASTP20810 708 aaKnown RBP22.64■■□□□ 1.22
LSM11-201ENST00000286307 NFATC2IPQ8NCF5 419 aa22.64■■□□□ 1.22
LSM11-201ENST00000286307 ZNF213O14771 459 aa22.64■■□□□ 1.21
LSM11-201ENST00000286307 CHPF2Q9P2E5 772 aa22.64■■□□□ 1.21
LSM11-201ENST00000286307 ABCC11Q96J66 1382 aa22.63■■□□□ 1.21
LSM11-201ENST00000286307 TPTE2Q6XPS3 522 aa22.63■■□□□ 1.21
LSM11-201ENST00000286307 GOLIM4O00461 696 aa22.63■■□□□ 1.21
LSM11-201ENST00000286307 PICALMQ13492 652 aa22.63■■□□□ 1.21
LSM11-201ENST00000286307 CCDC184Q52MB2 194 aa22.63■■□□□ 1.21
LSM11-201ENST00000286307 CCNL1Q9UK58 526 aaPredicted RBP22.63■■□□□ 1.21
LSM11-201ENST00000286307 AEBP1Q8IUX7 1158 aa22.63■■□□□ 1.21
LSM11-201ENST00000286307 AKAP4Q5JQC9 854 aa22.63■■□□□ 1.21
LSM11-201ENST00000286307 SEPT11Q9NVA2 429 aaKnown RBP22.62■■□□□ 1.21
LSM11-201ENST00000286307 GSTO1P78417 241 aa22.62■■□□□ 1.21
LSM11-201ENST00000286307 CCDC173Q0VFZ6 552 aa22.62■■□□□ 1.21
LSM11-201ENST00000286307 EHMT1Q9H9B1 1298 aa22.62■■□□□ 1.21
LSM11-201ENST00000286307 NSD2O96028 1365 aa22.62■■□□□ 1.21
LSM11-201ENST00000286307 ALDH1L2Q3SY69 923 aa22.62■■□□□ 1.21
LSM11-201ENST00000286307 COPS6Q7L5N1 327 aa22.62■■□□□ 1.21
LSM11-201ENST00000286307 LIG1P18858 919 aa22.62■■□□□ 1.21
LSM11-201ENST00000286307 APBA3O96018 575 aa22.61■■□□□ 1.21
LSM11-201ENST00000286307 RDXP35241 583 aaKnown RBP22.61■■□□□ 1.21
LSM11-201ENST00000286307 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
LSM11-201ENST00000286307 TTF1Q15361 905 aaPredicted RBP22.61■■□□□ 1.21
LSM11-201ENST00000286307 NUP153P49790 1475 aaKnown RBP22.61■■□□□ 1.21
LSM11-201ENST00000286307 CAGE1Q8TC20 777 aa22.6■■□□□ 1.21
LSM11-201ENST00000286307 TRIM21P19474 475 aaKnown RBP22.6■■□□□ 1.21
LSM11-201ENST00000286307 PRPF40BQ6NWY9 871 aaKnown RBP22.6■■□□□ 1.21
LSM11-201ENST00000286307 DISP3Q9P2K9 1392 aa22.6■■□□□ 1.21
LSM11-201ENST00000286307 DHX8Q14562 1220 aaKnown RBP22.6■■□□□ 1.21
LSM11-201ENST00000286307 ABCC2Q92887 1545 aa22.6■■□□□ 1.21
LSM11-201ENST00000286307 ANKRD36BQ8N2N9 1353 aa22.6■■□□□ 1.21
LSM11-201ENST00000286307 ZC3H12CQ9C0D7 883 aaKnown RBP22.6■■□□□ 1.21
LSM11-201ENST00000286307 MBIPQ9NS73 344 aa22.6■■□□□ 1.21
LSM11-201ENST00000286307 PIK3R4Q99570 1358 aa22.6■■□□□ 1.21
LSM11-201ENST00000286307 SLC12A7Q9Y666 1083 aa22.6■■□□□ 1.21
LSM11-201ENST00000286307 CTTNBP2Q8WZ74 1663 aa22.59■■□□□ 1.21
LSM11-201ENST00000286307 KIAA0556O60303 1618 aa22.59■■□□□ 1.21
LSM11-201ENST00000286307 TSPY2A6NKD2 308 aa22.59■■□□□ 1.21
LSM11-201ENST00000286307 RNF41Q9H4P4 317 aaPredicted RBP22.59■■□□□ 1.21
LSM11-201ENST00000286307 CA8P35219 290 aa22.59■■□□□ 1.21
LSM11-201ENST00000286307 ZNF804AQ7Z570 1209 aa22.59■■□□□ 1.21
LSM11-201ENST00000286307 NSFL1CQ9UNZ2 370 aaKnown RBP22.59■■□□□ 1.21
LSM11-201ENST00000286307 IFIT3O14879 490 aaKnown RBP22.59■■□□□ 1.21
LSM11-201ENST00000286307 SMARCE1Q969G3 411 aa22.59■■□□□ 1.21
LSM11-201ENST00000286307 ORAI2Q96SN7 254 aa22.59■■□□□ 1.21
LSM11-201ENST00000286307 PTPRCP08575 1304 aa22.58■■□□□ 1.21
LSM11-201ENST00000286307 PRPF40AO75400 957 aaKnown RBP22.58■■□□□ 1.21
LSM11-201ENST00000286307 ZNF408Q9H9D4 720 aa22.58■■□□□ 1.2
LSM11-201ENST00000286307 PCDH11XQ9BZA7 1347 aa22.58■■□□□ 1.2
LSM11-201ENST00000286307 PCDH11YQ9BZA8 1340 aa22.58■■□□□ 1.2
LSM11-201ENST00000286307 CEP57L1Q8IYX8 460 aa22.58■■□□□ 1.2
LSM11-201ENST00000286307 PDE4BQ07343 736 aa22.57■■□□□ 1.2
LSM11-201ENST00000286307 RNF214Q8ND24 703 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms