RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CACNA1FO60840 1977 aa22.55■■□□□ 1.2
PDLIM3-201ENST00000284767 HOXB7P09629 217 aa22.54■■□□□ 1.2
PDLIM3-201ENST00000284767 TOM1L2Q6ZVM7 507 aa22.54■■□□□ 1.2
PDLIM3-201ENST00000284767 SLC52A2Q9HAB3 445 aa22.54■■□□□ 1.2
PDLIM3-201ENST00000284767 OVOS2A0A0G2JMS6 1433 aa22.54■■□□□ 1.2
PDLIM3-201ENST00000284767 SIPA1L3O60292 1781 aaPredicted RBP22.54■■□□□ 1.2
PDLIM3-201ENST00000284767 PI4KAP2A4QPH2 592 aa22.53■■□□□ 1.2
PDLIM3-201ENST00000284767 GNAI2P04899 355 aa22.53■■□□□ 1.2
PDLIM3-201ENST00000284767 IFNL2Q8IZJ0 200 aa22.53■■□□□ 1.2
PDLIM3-201ENST00000284767 PI4KAP1Q8N8J0 262 aa22.53■■□□□ 1.2
PDLIM3-201ENST00000284767 KIF2CQ99661 725 aa22.53■■□□□ 1.2
PDLIM3-201ENST00000284767 USP44Q9H0E7 712 aa22.53■■□□□ 1.2
PDLIM3-201ENST00000284767 STRN4Q9NRL3 753 aa22.52■■□□□ 1.2
PDLIM3-201ENST00000284767 LRRFIP2Q9Y608 721 aaKnown RBP22.52■■□□□ 1.2
PDLIM3-201ENST00000284767 ADAMTS7Q9UKP4 1686 aa22.52■■□□□ 1.2
PDLIM3-201ENST00000284767 HEG1Q9ULI3 1381 aa22.52■■□□□ 1.19
PDLIM3-201ENST00000284767 PNMA6EA0A0J9YXQ4 647 aa22.51■■□□□ 1.19
PDLIM3-201ENST00000284767 ZNF790Q6PG37 636 aa22.51■■□□□ 1.19
PDLIM3-201ENST00000284767 NAP1L5Q96NT1 182 aaPredicted RBP22.5■■□□□ 1.19
PDLIM3-201ENST00000284767 WDR17Q8IZU2 1322 aa22.5■■□□□ 1.19
PDLIM3-201ENST00000284767 PLEKHM2Q8IWE5 1019 aa22.5■■□□□ 1.19
PDLIM3-201ENST00000284767 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.5■■□□□ 1.19
PDLIM3-201ENST00000284767 EXOC6BQ9Y2D4 811 aa22.5■■□□□ 1.19
PDLIM3-201ENST00000284767 SCN11AQ9UI33 1791 aa22.5■■□□□ 1.19
PDLIM3-201ENST00000284767 DBF4Q9UBU7 674 aaPredicted RBP22.49■■□□□ 1.19
PDLIM3-201ENST00000284767 K7ELQ4 463 aaPredicted RBP22.49■■□□□ 1.19
PDLIM3-201ENST00000284767 ADCY9O60503 1353 aa22.49■■□□□ 1.19
PDLIM3-201ENST00000284767 ESPNB1AK53 854 aa22.48■■□□□ 1.19
PDLIM3-201ENST00000284767 GNAI3P08754 354 aa22.48■■□□□ 1.19
PDLIM3-201ENST00000284767 DNAAF4Q8WXU2 420 aa22.48■■□□□ 1.19
PDLIM3-201ENST00000284767 COL5A2P05997 1499 aaPredicted RBP22.48■■□□□ 1.19
PDLIM3-201ENST00000284767 LARP1Q6PKG0 1096 aaKnown RBP22.48■■□□□ 1.19
PDLIM3-201ENST00000284767 ZNF496Q96IT1 587 aaPredicted RBP22.48■■□□□ 1.19
PDLIM3-201ENST00000284767 SRCIN1Q9C0H9 1055 aa22.48■■□□□ 1.19
PDLIM3-201ENST00000284767 ABCC6O95255 1503 aa22.48■■□□□ 1.19
PDLIM3-201ENST00000284767 HSP90AA1P07900 732 aaKnown RBP22.47■■□□□ 1.19
PDLIM3-201ENST00000284767 NBPF7P0C2Y1 421 aaPredicted RBP22.47■■□□□ 1.19
PDLIM3-201ENST00000284767 GSPT1P15170 499 aaKnown RBP22.47■■□□□ 1.19
PDLIM3-201ENST00000284767 TBC1D9Q6ZT07 1266 aa22.47■■□□□ 1.19
PDLIM3-201ENST00000284767 BEND3Q5T5X7 828 aa22.47■■□□□ 1.19
PDLIM3-201ENST00000284767 UBTFL1P0CB47 393 aaPredicted RBP22.46■■□□□ 1.19
PDLIM3-201ENST00000284767 PIP4K2AP48426 406 aaPredicted RBP22.46■■□□□ 1.19
PDLIM3-201ENST00000284767 AIMP1Q12904 312 aaKnown RBP22.46■■□□□ 1.19
PDLIM3-201ENST00000284767 DCAF5Q96JK2 942 aa22.46■■□□□ 1.19
PDLIM3-201ENST00000284767 ABCA3Q99758 1704 aa22.46■■□□□ 1.19
PDLIM3-201ENST00000284767 HMMRO75330 724 aa22.46■■□□□ 1.19
PDLIM3-201ENST00000284767 PXDNLA1KZ92 1463 aa22.46■■□□□ 1.19
PDLIM3-201ENST00000284767 CLEC17AQ6ZS10 378 aa22.45■■□□□ 1.19
PDLIM3-201ENST00000284767 TRIM44Q96DX7 344 aaPredicted RBP22.45■■□□□ 1.18
PDLIM3-201ENST00000284767 MAP3K2Q9Y2U5 619 aa22.45■■□□□ 1.18
PDLIM3-201ENST00000284767 PDIA6Q15084 440 aa22.45■■□□□ 1.18
PDLIM3-201ENST00000284767 PKD1L3Q7Z443 1732 aa22.44■■□□□ 1.18
PDLIM3-201ENST00000284767 GAS2L3Q86XJ1 694 aa22.44■■□□□ 1.18
PDLIM3-201ENST00000284767 NHSL1Q5SYE7 1610 aa22.44■■□□□ 1.18
PDLIM3-201ENST00000284767 MYL6BP14649 208 aa22.44■■□□□ 1.18
PDLIM3-201ENST00000284767 ATP8B2P98198 1209 aa22.44■■□□□ 1.18
PDLIM3-201ENST00000284767 C5P01031 1676 aa22.43■■□□□ 1.18
PDLIM3-201ENST00000284767 GOLGA6L22H0YM25 854 aa22.43■■□□□ 1.18
PDLIM3-201ENST00000284767 CDC45O75419 566 aa22.43■■□□□ 1.18
PDLIM3-201ENST00000284767 CD2BP2O95400 341 aaKnown RBP22.43■■□□□ 1.18
PDLIM3-201ENST00000284767 N4BP2Q86UW6 1770 aaPredicted RBP22.43■■□□□ 1.18
PDLIM3-201ENST00000284767 CABP4P57796 275 aa22.43■■□□□ 1.18
PDLIM3-201ENST00000284767 EVA1CP58658 441 aa22.43■■□□□ 1.18
PDLIM3-201ENST00000284767 ZCRB1Q8TBF4 217 aaKnown RBP22.43■■□□□ 1.18
PDLIM3-201ENST00000284767 DDX54Q8TDD1 881 aaKnown RBP22.43■■□□□ 1.18
PDLIM3-201ENST00000284767 USP16Q9Y5T5 823 aa22.43■■□□□ 1.18
PDLIM3-201ENST00000284767 IBTKQ9P2D0 1353 aaPredicted RBP22.42■■□□□ 1.18
PDLIM3-201ENST00000284767 CWF19L2Q2TBE0 894 aaKnown RBP22.42■■□□□ 1.18
PDLIM3-201ENST00000284767 TSHZ3Q63HK5 1081 aa22.41■■□□□ 1.18
PDLIM3-201ENST00000284767 TTC5Q8N0Z6 440 aa22.41■■□□□ 1.18
PDLIM3-201ENST00000284767 ERBB4Q15303 1308 aa22.4■■□□□ 1.18
PDLIM3-201ENST00000284767 TTC22Q5TAA0 569 aa22.4■■□□□ 1.18
PDLIM3-201ENST00000284767 CHMP4AQ9BY43 222 aa22.4■■□□□ 1.18
PDLIM3-201ENST00000284767 DDX21Q9NR30 783 aaKnown RBP eCLIP22.4■■□□□ 1.18
PDLIM3-201ENST00000284767 KSR2Q6VAB6 950 aa22.4■■□□□ 1.18
PDLIM3-201ENST00000284767 PPP1R42Q7Z4L9 355 aa22.4■■□□□ 1.18
PDLIM3-201ENST00000284767 IL2RBP14784 551 aa22.39■■□□□ 1.17
PDLIM3-201ENST00000284767 CARD10Q9BWT7 1032 aa22.39■■□□□ 1.17
PDLIM3-201ENST00000284767 HYPKQ9NX55 129 aa22.39■■□□□ 1.17
PDLIM3-201ENST00000284767 BTG4Q9NY30 223 aa22.38■■□□□ 1.17
PDLIM3-201ENST00000284767 MRC1P22897 1456 aa22.38■■□□□ 1.17
PDLIM3-201ENST00000284767 CCDC173Q0VFZ6 552 aa22.38■■□□□ 1.17
PDLIM3-201ENST00000284767 KLHL40Q2TBA0 621 aa22.38■■□□□ 1.17
PDLIM3-201ENST00000284767 PCDH11XQ9BZA7 1347 aa22.37■■□□□ 1.17
PDLIM3-201ENST00000284767 PCDH11YQ9BZA8 1340 aa22.37■■□□□ 1.17
PDLIM3-201ENST00000284767 SSFA2P28290 1259 aa22.37■■□□□ 1.17
PDLIM3-201ENST00000284767 RABEP1Q15276 862 aa22.37■■□□□ 1.17
PDLIM3-201ENST00000284767 RBM42Q9BTD8 480 aaKnown RBP22.37■■□□□ 1.17
PDLIM3-201ENST00000284767 FOXD4L1Q9NU39 408 aa22.37■■□□□ 1.17
PDLIM3-201ENST00000284767 SRGAP3O43295 1099 aa22.36■■□□□ 1.17
PDLIM3-201ENST00000284767 XAGE3Q8WTP9 111 aa22.36■■□□□ 1.17
PDLIM3-201ENST00000284767 PPP1R9BQ96SB3 815 aa22.36■■□□□ 1.17
PDLIM3-201ENST00000284767 LRRCC1Q9C099 1032 aa22.36■■□□□ 1.17
PDLIM3-201ENST00000284767 PARP4Q9UKK3 1724 aaKnown RBP22.35■■□□□ 1.17
PDLIM3-201ENST00000284767 RRP9O43818 475 aaKnown RBP22.35■■□□□ 1.17
PDLIM3-201ENST00000284767 SNRPA1P09661 255 aaKnown RBP22.35■■□□□ 1.17
PDLIM3-201ENST00000284767 GLIPR1L2Q4G1C9 344 aa22.35■■□□□ 1.17
PDLIM3-201ENST00000284767 COPS6Q7L5N1 327 aa22.35■■□□□ 1.17
PDLIM3-201ENST00000284767 FMNL2Q96PY5 1086 aa22.35■■□□□ 1.17
PDLIM3-201ENST00000284767 IL1RAPL2Q9NP60 686 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms