RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 COPS6Q7L5N1 327 aa13.77□□□□□ -0.21
GGPS1-201ENST00000282841 XAGE3Q8WTP9 111 aa13.77□□□□□ -0.21
GGPS1-201ENST00000282841 PIGBQ92521 554 aa13.77□□□□□ -0.21
GGPS1-201ENST00000282841 ARXQ96QS3 562 aa13.77□□□□□ -0.21
GGPS1-201ENST00000282841 EXOC5O00471 708 aa13.76□□□□□ -0.21
GGPS1-201ENST00000282841 SEC24BO95487 1268 aa13.76□□□□□ -0.21
GGPS1-201ENST00000282841 C8orf34Q49A92 452 aa13.76□□□□□ -0.21
GGPS1-201ENST00000282841 SMC5Q8IY18 1101 aa13.76□□□□□ -0.21
GGPS1-201ENST00000282841 DNAAF4Q8WXU2 420 aa13.76□□□□□ -0.21
GGPS1-201ENST00000282841 FMNL2Q96PY5 1086 aa13.76□□□□□ -0.21
GGPS1-201ENST00000282841 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
GGPS1-201ENST00000282841 ADCY9O60503 1353 aa13.76□□□□□ -0.21
GGPS1-201ENST00000282841 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
GGPS1-201ENST00000282841 PNMA6EA0A0J9YXQ4 647 aa13.76□□□□□ -0.21
GGPS1-201ENST00000282841 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
GGPS1-201ENST00000282841 TMOD3Q9NYL9 352 aa13.76□□□□□ -0.21
GGPS1-201ENST00000282841 SNRPA1P09661 255 aaKnown RBP13.75□□□□□ -0.21
GGPS1-201ENST00000282841 RTL5Q5HYW3 569 aaPredicted RBP13.75□□□□□ -0.21
GGPS1-201ENST00000282841 OTUD7AQ8TE49 926 aaPredicted RBP13.75□□□□□ -0.21
GGPS1-201ENST00000282841 EXOC6BQ9Y2D4 811 aa13.75□□□□□ -0.21
GGPS1-201ENST00000282841 CERKQ8TCT0 537 aa13.75□□□□□ -0.21
GGPS1-201ENST00000282841 SRCIN1Q9C0H9 1055 aa13.75□□□□□ -0.21
GGPS1-201ENST00000282841 HSPA1LP34931 641 aa13.74□□□□□ -0.21
GGPS1-201ENST00000282841 PRIM1P49642 420 aaKnown RBP13.74□□□□□ -0.21
GGPS1-201ENST00000282841 SIPA1L3O60292 1781 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-201ENST00000282841 ABCC6O95255 1503 aa13.74□□□□□ -0.21
GGPS1-201ENST00000282841 PKD1L3Q7Z443 1732 aa13.74□□□□□ -0.21
GGPS1-201ENST00000282841 HOXB7P09629 217 aa13.74□□□□□ -0.21
GGPS1-201ENST00000282841 BEND3Q5T5X7 828 aa13.74□□□□□ -0.21
GGPS1-201ENST00000282841 CHD1LQ86WJ1 897 aa13.74□□□□□ -0.21
GGPS1-201ENST00000282841 DDX21Q9NR30 783 aaKnown RBP eCLIP13.74□□□□□ -0.21
GGPS1-201ENST00000282841 ATP10DQ9P241 1426 aa13.74□□□□□ -0.21
GGPS1-201ENST00000282841 ATP5J2-PTCD1G3V325 749 aa13.73□□□□□ -0.21
GGPS1-201ENST00000282841 NUCB1Q02818 461 aa13.73□□□□□ -0.21
GGPS1-201ENST00000282841 RIC3Q7Z5B4 369 aa13.73□□□□□ -0.21
GGPS1-201ENST00000282841 ANKRD44Q8N8A2 993 aa13.73□□□□□ -0.21
GGPS1-201ENST00000282841 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
GGPS1-201ENST00000282841 GNAI2P04899 355 aa13.73□□□□□ -0.21
GGPS1-201ENST00000282841 NBPF14Q5TI25 921 aa13.73□□□□□ -0.21
GGPS1-201ENST00000282841 NBPF10Q6P3W6 841 aaKnown RBP13.73□□□□□ -0.21
GGPS1-201ENST00000282841 NBPF15Q8N660 670 aa13.73□□□□□ -0.21
GGPS1-201ENST00000282841 C5P01031 1676 aa13.73□□□□□ -0.21
GGPS1-201ENST00000282841 SPATA31A1Q5TZJ5 1347 aa13.73□□□□□ -0.21
GGPS1-201ENST00000282841 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
GGPS1-201ENST00000282841 UBTFL1P0CB47 393 aaPredicted RBP13.73□□□□□ -0.21
GGPS1-201ENST00000282841 DEKP35659 375 aaKnown RBP13.72□□□□□ -0.21
GGPS1-201ENST00000282841 NKX1-1Q15270 411 aaPredicted RBP13.72□□□□□ -0.21
GGPS1-201ENST00000282841 DDB1Q16531 1140 aa13.72□□□□□ -0.21
GGPS1-201ENST00000282841 FAM161AQ3B820 660 aa13.72□□□□□ -0.21
GGPS1-201ENST00000282841 PARP4Q9UKK3 1724 aaKnown RBP13.72□□□□□ -0.21
GGPS1-201ENST00000282841 TSHZ3Q63HK5 1081 aa13.72□□□□□ -0.21
GGPS1-201ENST00000282841 KSR2Q6VAB6 950 aa13.72□□□□□ -0.21
GGPS1-201ENST00000282841 TTLL7Q6ZT98 887 aa13.72□□□□□ -0.21
GGPS1-201ENST00000282841 HYPKQ9NX55 129 aa13.72□□□□□ -0.21
GGPS1-201ENST00000282841 COL14A1Q05707 1796 aaKnown RBP13.71□□□□□ -0.21
GGPS1-201ENST00000282841 KCNQ4P56696 695 aa13.71□□□□□ -0.21
GGPS1-201ENST00000282841 DNAJC10Q8IXB1 793 aa13.71□□□□□ -0.21
GGPS1-201ENST00000282841 MYD88Q99836 296 aa13.71□□□□□ -0.21
GGPS1-201ENST00000282841 CHMP4BQ9H444 224 aaKnown RBP13.71□□□□□ -0.21
GGPS1-201ENST00000282841 ATG3Q9NT62 314 aa13.71□□□□□ -0.21
GGPS1-201ENST00000282841 ADAMTS7Q9UKP4 1686 aa13.71□□□□□ -0.21
GGPS1-201ENST00000282841 SHANK3Q9BYB0 1731 aa13.71□□□□□ -0.22
GGPS1-201ENST00000282841 MARCH10Q8NA82 808 aaPredicted RBP13.71□□□□□ -0.22
GGPS1-201ENST00000282841 C9orf78Q9NZ63 289 aaPredicted RBP13.71□□□□□ -0.22
GGPS1-201ENST00000282841 MSH5O43196 834 aa13.7□□□□□ -0.22
GGPS1-201ENST00000282841 KCNQ2O43526 872 aa13.7□□□□□ -0.22
GGPS1-201ENST00000282841 PTF1AQ7RTS3 328 aa13.7□□□□□ -0.22
GGPS1-201ENST00000282841 ZBTB3Q9H5J0 574 aa13.7□□□□□ -0.22
GGPS1-201ENST00000282841 SOS1Q07889 1333 aaPredicted RBP13.7□□□□□ -0.22
GGPS1-201ENST00000282841 DCTPP1Q9H773 170 aa13.7□□□□□ -0.22
GGPS1-201ENST00000282841 IGKV5-2P06315 115 aa13.69□□□□□ -0.22
GGPS1-201ENST00000282841 SLC4A9Q96Q91 983 aa13.69□□□□□ -0.22
GGPS1-201ENST00000282841 ANKRD13DQ6ZTN6 518 aa13.69□□□□□ -0.22
GGPS1-201ENST00000282841 LRP10Q7Z4F1 713 aa13.69□□□□□ -0.22
GGPS1-201ENST00000282841 PPP1R42Q7Z4L9 355 aa13.69□□□□□ -0.22
GGPS1-201ENST00000282841 RPAP2Q8IXW5 612 aaPredicted RBP13.69□□□□□ -0.22
GGPS1-201ENST00000282841 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
GGPS1-201ENST00000282841 SPATA31A5Q5VU36 1347 aa13.69□□□□□ -0.22
GGPS1-201ENST00000282841 SPATA31A7Q8IWB4 1347 aa13.69□□□□□ -0.22
GGPS1-201ENST00000282841 COL22A1Q8NFW1 1626 aaPredicted RBP13.69□□□□□ -0.22
GGPS1-201ENST00000282841 GNAI3P08754 354 aa13.69□□□□□ -0.22
GGPS1-201ENST00000282841 MEX3CQ5U5Q3 659 aaKnown RBP13.69□□□□□ -0.22
GGPS1-201ENST00000282841 PLCH1Q4KWH8 1693 aa13.69□□□□□ -0.22
GGPS1-201ENST00000282841 TOGARAM1Q9Y4F4 1720 aa13.68□□□□□ -0.22
GGPS1-201ENST00000282841 DISP2A7MBM2 1401 aa13.68□□□□□ -0.22
GGPS1-201ENST00000282841 UNC5CLQ8IV45 518 aa13.68□□□□□ -0.22
GGPS1-201ENST00000282841 GCC1Q96CN9 775 aa13.68□□□□□ -0.22
GGPS1-201ENST00000282841 GOLGB1Q14789 3259 aaKnown RBP13.68□□□□□ -0.22
GGPS1-201ENST00000282841 IL1RAPL2Q9NP60 686 aa13.68□□□□□ -0.22
GGPS1-201ENST00000282841 MRC1P22897 1456 aa13.67□□□□□ -0.22
GGPS1-201ENST00000282841 SRGAP3O43295 1099 aa13.67□□□□□ -0.22
GGPS1-201ENST00000282841 USP21Q9UK80 565 aa13.67□□□□□ -0.22
GGPS1-201ENST00000282841 PA2G4Q9UQ80 394 aaKnown RBP13.67□□□□□ -0.22
GGPS1-201ENST00000282841 DDX58O95786 925 aaKnown RBP13.66□□□□□ -0.22
GGPS1-201ENST00000282841 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
GGPS1-201ENST00000282841 KLHDC4Q8TBB5 520 aa13.66□□□□□ -0.22
GGPS1-201ENST00000282841 CACNA1FO60840 1977 aa13.66□□□□□ -0.22
GGPS1-201ENST00000282841 JCADQ9P266 1359 aa13.66□□□□□ -0.22
GGPS1-201ENST00000282841 SLC4A3P48751 1232 aa13.66□□□□□ -0.22
GGPS1-201ENST00000282841 LRP6O75581 1613 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms