RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 TNMDQ9H2S6 317 aa10.06□□□□□ -0.8
A1CF-201ENST00000282641 KIF5CO60282 957 aa10.05□□□□□ -0.8
A1CF-201ENST00000282641 MRFAP1L1Q96HT8 127 aa10.05□□□□□ -0.8
A1CF-201ENST00000282641 TERF2Q15554 542 aa10.05□□□□□ -0.8
A1CF-201ENST00000282641 MX1P20591 662 aa10.05□□□□□ -0.8
A1CF-201ENST00000282641 MYO1AQ9UBC5 1043 aa10.05□□□□□ -0.8
A1CF-201ENST00000282641 ADGRL2O95490 1459 aa10.05□□□□□ -0.8
A1CF-201ENST00000282641 DYNC1I2Q13409 638 aaKnown RBP10.05□□□□□ -0.8
A1CF-201ENST00000282641 NAA25Q14CX7 972 aa10.05□□□□□ -0.8
A1CF-201ENST00000282641 WWC2Q6AWC2 1192 aa10.05□□□□□ -0.8
A1CF-201ENST00000282641 CCDC47Q96A33 483 aaKnown RBP10.05□□□□□ -0.8
A1CF-201ENST00000282641 JRKLQ9Y4A0 524 aa10.05□□□□□ -0.8
A1CF-201ENST00000282641 GORABQ5T7V8 394 aa10.05□□□□□ -0.8
A1CF-201ENST00000282641 MSL3Q8N5Y2 521 aaKnown RBP10.05□□□□□ -0.8
A1CF-201ENST00000282641 FAM71BQ8TC56 605 aa10.05□□□□□ -0.8
A1CF-201ENST00000282641 PPP1R12AO14974 1030 aaPredicted RBP10.04□□□□□ -0.8
A1CF-201ENST00000282641 XPCQ01831 940 aaPredicted RBP10.04□□□□□ -0.8
A1CF-201ENST00000282641 GPATCH11Q8N954 259 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 SLFN5Q08AF3 891 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 CCDC146Q8IYE0 955 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 RGS22Q8NE09 1264 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 CNKSR2Q8WXI2 1034 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 POLR3AO14802 1390 aaPredicted RBP10.04□□□□□ -0.8
A1CF-201ENST00000282641 VCXQ9H320 206 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 VEZTQ9HBM0 779 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 DDX41Q9UJV9 622 aaKnown RBP10.04□□□□□ -0.8
A1CF-201ENST00000282641 RCSD1Q6JBY9 416 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 BRAPQ7Z569 592 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 DONSONQ9NYP3 566 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 CBX1P83916 185 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 SNW1Q13573 536 aaKnown RBP10.04□□□□□ -0.8
A1CF-201ENST00000282641 TSNAXIP1Q2TAA8 658 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 CCDC57Q2TAC2 916 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 KDM5CP41229 1560 aa10.04□□□□□ -0.8
A1CF-201ENST00000282641 CEP128Q6ZU80 1094 aa10.03□□□□□ -0.8
A1CF-201ENST00000282641 SPATA31E1Q6ZUB1 1445 aa10.03□□□□□ -0.8
A1CF-201ENST00000282641 RBM33Q96EV2 1170 aaKnown RBP10.03□□□□□ -0.8
A1CF-201ENST00000282641 RRP7BPQ9NSQ0 103 aa10.03□□□□□ -0.8
A1CF-201ENST00000282641 TTC41PQ6P2S7 1318 aa10.03□□□□□ -0.8
A1CF-201ENST00000282641 FLOT1O75955 427 aa10.03□□□□□ -0.8
A1CF-201ENST00000282641 RLBP1P12271 317 aa10.03□□□□□ -0.8
A1CF-201ENST00000282641 SPAG1Q07617 926 aa10.03□□□□□ -0.8
A1CF-201ENST00000282641 JAKMIP1Q96N16 626 aaKnown RBP10.03□□□□□ -0.8
A1CF-201ENST00000282641 LARSQ9P2J5 1176 aaKnown RBP10.03□□□□□ -0.8
A1CF-201ENST00000282641 EFCAB8A8MWE9 144 aa10.03□□□□□ -0.8
A1CF-201ENST00000282641 SMC1AQ14683 1233 aaKnown RBP10.03□□□□□ -0.8
A1CF-201ENST00000282641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.03□□□□□ -0.8
A1CF-201ENST00000282641 HOMER3Q9NSC5 361 aa10.03□□□□□ -0.8
A1CF-201ENST00000282641 FAM135BQ49AJ0 1406 aa10.03□□□□□ -0.8
A1CF-201ENST00000282641 C9orf84Q5VXU9 1444 aa10.03□□□□□ -0.8
A1CF-201ENST00000282641 SEPT6Q14141 434 aa10.03□□□□□ -0.8
A1CF-201ENST00000282641 GUCY2CP25092 1073 aa10.02□□□□□ -0.8
A1CF-201ENST00000282641 TMEM87AQ8NBN3 555 aa10.02□□□□□ -0.8
A1CF-201ENST00000282641 RABGGTAQ92696 567 aa10.02□□□□□ -0.8
A1CF-201ENST00000282641 LMNTD2Q8IXW0 634 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 CTAGE1Q96RT6 745 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 IFT140Q96RY7 1462 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 MRPS25P82663 173 aaKnown RBP10.02□□□□□ -0.81
A1CF-201ENST00000282641 ICA1Q05084 483 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 CCDC186Q7Z3E2 898 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 IQGAP2Q13576 1575 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 WASHC4Q2M389 1173 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 CABS1Q96KC9 395 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 H3BQV1 296 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 MAP2K1Q02750 393 aaPredicted RBP10.02□□□□□ -0.81
A1CF-201ENST00000282641 PKD2Q13563 968 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 IFFO2Q5TF58 517 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 ZSCAN16Q9H4T2 348 aaPredicted RBP10.02□□□□□ -0.81
A1CF-201ENST00000282641 CCDC151A5D8V7 595 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 PSDA5PKW4 1024 aaPredicted RBP10.02□□□□□ -0.81
A1CF-201ENST00000282641 MORC2Q9Y6X9 1032 aaPredicted RBP10.02□□□□□ -0.81
A1CF-201ENST00000282641 ADCY5O95622 1261 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 GNAI3P08754 354 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 TRAF1Q13077 416 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 BICD2Q8TD16 824 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 TBC1D22AQ8WUA7 517 aa10.02□□□□□ -0.81
A1CF-201ENST00000282641 PHLPP2Q6ZVD8 1323 aa10.01□□□□□ -0.81
A1CF-201ENST00000282641 PRPHP41219 470 aa10.01□□□□□ -0.81
A1CF-201ENST00000282641 ACTR5Q9H9F9 607 aaPredicted RBP10.01□□□□□ -0.81
A1CF-201ENST00000282641 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.01□□□□□ -0.81
A1CF-201ENST00000282641 ZNF592Q92610 1267 aa10.01□□□□□ -0.81
A1CF-201ENST00000282641 SYCE3A1L190 88 aa10.01□□□□□ -0.81
A1CF-201ENST00000282641 CDKL5O76039 1030 aa10.01□□□□□ -0.81
A1CF-201ENST00000282641 PEX19P40855 299 aa10.01□□□□□ -0.81
A1CF-201ENST00000282641 KCNH8Q96L42 1107 aa10.01□□□□□ -0.81
A1CF-201ENST00000282641 GRIPAP1Q4V328 841 aa10.01□□□□□ -0.81
A1CF-201ENST00000282641 CCDC158Q5M9N0 1113 aa10.01□□□□□ -0.81
A1CF-201ENST00000282641 CDK5RAP3Q96JB5 506 aa10.01□□□□□ -0.81
A1CF-201ENST00000282641 PHAXQ9H814 394 aaKnown RBP10.01□□□□□ -0.81
A1CF-201ENST00000282641 KIF5BP33176 963 aa10.01□□□□□ -0.81
A1CF-201ENST00000282641 CTIFO43310 598 aaKnown RBP10□□□□□ -0.81
A1CF-201ENST00000282641 CAPN2P17655 700 aa10□□□□□ -0.81
A1CF-201ENST00000282641 GBP1P32455 592 aa10□□□□□ -0.81
A1CF-201ENST00000282641 TRIM14Q14142 442 aa10□□□□□ -0.81
A1CF-201ENST00000282641 WHAMMP3Q1A5X7 153 aa10□□□□□ -0.81
A1CF-201ENST00000282641 THEGQ9P2T0 379 aa10□□□□□ -0.81
A1CF-201ENST00000282641 SRRM3A6NNA2 597 aaPredicted RBP10□□□□□ -0.81
A1CF-201ENST00000282641 ZRANB2O95218 330 aaKnown RBP eCLIP10□□□□□ -0.81
A1CF-201ENST00000282641 MAP7Q14244 749 aa10□□□□□ -0.81
A1CF-201ENST00000282641 CEP104O60308 925 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms