RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 MYD88Q99836 296 aa7.42□□□□□ -1.22
TNFSF4-201ENST00000281834 UPF3BQ9BZI7 483 aaKnown RBP7.42□□□□□ -1.22
TNFSF4-201ENST00000281834 ANTXR1Q9H6X2 564 aa7.42□□□□□ -1.22
TNFSF4-201ENST00000281834 SPG7Q9UQ90 795 aa7.42□□□□□ -1.22
TNFSF4-201ENST00000281834 RBM25P49756 843 aaKnown RBP7.41□□□□□ -1.22
TNFSF4-201ENST00000281834 BEND3Q5T5X7 828 aa7.41□□□□□ -1.22
TNFSF4-201ENST00000281834 KIF2CQ99661 725 aa7.41□□□□□ -1.22
TNFSF4-201ENST00000281834 KIF24Q5T7B8 1368 aa7.41□□□□□ -1.22
TNFSF4-201ENST00000281834 NEK4P51957 841 aa7.41□□□□□ -1.22
TNFSF4-201ENST00000281834 RHPN1Q8TCX5 695 aa7.41□□□□□ -1.22
TNFSF4-201ENST00000281834 SYTL4Q96C24 671 aaPredicted RBP7.41□□□□□ -1.22
TNFSF4-201ENST00000281834 FMN2Q9NZ56 1722 aa7.41□□□□□ -1.22
TNFSF4-201ENST00000281834 K7ELQ4 463 aaPredicted RBP7.4□□□□□ -1.22
TNFSF4-201ENST00000281834 ERC2O15083 957 aa7.4□□□□□ -1.22
TNFSF4-201ENST00000281834 CYP27B1O15528 508 aa7.4□□□□□ -1.22
TNFSF4-201ENST00000281834 IFNL2Q8IZJ0 200 aa7.4□□□□□ -1.22
TNFSF4-201ENST00000281834 CCDC8Q9H0W5 538 aaPredicted RBP7.4□□□□□ -1.22
TNFSF4-201ENST00000281834 CEMIPQ8WUJ3 1361 aa7.4□□□□□ -1.22
TNFSF4-201ENST00000281834 REC8O95072 547 aa7.4□□□□□ -1.22
TNFSF4-201ENST00000281834 PHKG2P15735 406 aa7.4□□□□□ -1.22
TNFSF4-201ENST00000281834 CWC27Q6UX04 472 aaKnown RBP7.4□□□□□ -1.22
TNFSF4-201ENST00000281834 BRINP3Q76B58 766 aa7.4□□□□□ -1.22
TNFSF4-201ENST00000281834 CCDC85AQ96PX6 553 aaPredicted RBP7.4□□□□□ -1.22
TNFSF4-201ENST00000281834 USP26Q9BXU7 913 aa7.4□□□□□ -1.22
TNFSF4-201ENST00000281834 NWD1Q149M9 1564 aa7.4□□□□□ -1.23
TNFSF4-201ENST00000281834 NCLP19338 710 aaKnown RBP7.4□□□□□ -1.23
TNFSF4-201ENST00000281834 NEXNQ0ZGT2 675 aa7.4□□□□□ -1.23
TNFSF4-201ENST00000281834 CHAMP1Q96JM3 812 aa7.4□□□□□ -1.23
TNFSF4-201ENST00000281834 SLC52A2Q9HAB3 445 aa7.4□□□□□ -1.23
TNFSF4-201ENST00000281834 DDX58O95786 925 aaKnown RBP7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 MCM4P33991 863 aa7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 KSR2Q6VAB6 950 aa7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 SLAIN2Q9P270 581 aa7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 IFIT2P09913 472 aaKnown RBP7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 SSFA2P28290 1259 aa7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 UBE3BQ7Z3V4 1068 aa7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 AACSQ86V21 672 aa7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 BICC1Q9H694 974 aaKnown RBP7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 NDUFB9Q9Y6M9 179 aa7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 ADCY9O60503 1353 aa7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 CLASRPQ8N2M8 674 aaKnown RBP7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 ZGPATQ8N5A5 531 aaKnown RBP7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 SUCLG2Q96I99 432 aa7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 IL25Q9H293 177 aa7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 ZBTB3Q9H5J0 574 aa7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 PALD1Q9ULE6 856 aa7.39□□□□□ -1.23
TNFSF4-201ENST00000281834 CHD2O14647 1828 aaKnown RBP7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 SSH3Q8TE77 659 aa7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 TNPO1Q92973 898 aaKnown RBP7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 KIF1BPQ96EK5 621 aa7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 RGPD1P0DJD0 1748 aa7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 NFAT5O94916 1531 aa7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 IBTKQ9P2D0 1353 aaPredicted RBP7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 GRM8O00222 908 aa7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 ST18O60284 1047 aa7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 A1BGP04217 495 aa7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 G3BP1Q13283 466 aaKnown RBP eCLIP7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 PKP1Q13835 747 aa7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 LARP1Q6PKG0 1096 aaKnown RBP7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 DDX21Q9NR30 783 aaKnown RBP eCLIP7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 HYPKQ9NX55 129 aa7.38□□□□□ -1.23
TNFSF4-201ENST00000281834 KCNJ4P48050 445 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 RABEP1Q15276 862 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 ANKRD13DQ6ZTN6 518 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 BABAM1Q9NWV8 329 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 LTN1O94822 1766 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 SPATA31A3Q5VYP0 1347 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 TRAK2O60296 914 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 CHMLP26374 656 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 ESYT1Q9BSJ8 1104 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 BOLA2Q9H3K6 86 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 RGPD2P0DJD1 1756 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 SNRPA1P09661 255 aaKnown RBP7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 CPA1P15085 419 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 ZCRB1Q8TBF4 217 aaKnown RBP7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 DIAPH3Q9NSV4 1193 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 MST1RQ04912 1400 aa7.37□□□□□ -1.23
TNFSF4-201ENST00000281834 A0A087WZG4 1122 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 IGKV5-2P06315 115 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 KIAA1211Q6ZU35 1233 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 LINS1Q8NG48 757 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 EDC3Q96F86 508 aaKnown RBP7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 FMNL2Q96PY5 1086 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 TLR7Q9NYK1 1049 aaKnown RBP7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 MEGF6O75095 1541 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 ADAMTS2O95450 1211 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 HOXB7P09629 217 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 MCCP23508 829 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 EPHA10Q5JZY3 1008 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 DCAF5Q96JK2 942 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 PDIA6Q15084 440 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 TTLL7Q6ZT98 887 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 SNX21Q969T3 373 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 ADAMTSL3P82987 1691 aa7.36□□□□□ -1.23
TNFSF4-201ENST00000281834 MCTP1Q6DN14 999 aa7.35□□□□□ -1.23
TNFSF4-201ENST00000281834 FAM177BA6PVY3 158 aa7.35□□□□□ -1.23
TNFSF4-201ENST00000281834 CNTROBQ8N137 903 aa7.35□□□□□ -1.23
TNFSF4-201ENST00000281834 NEUROD6Q96NK8 337 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms