RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 NBPF3Q9H094 633 aa7.68□□□□□ -1.18
LIN7C-201ENST00000278193 ANO2Q9NQ90 1003 aa7.68□□□□□ -1.18
LIN7C-201ENST00000278193 CCP110O43303 1012 aa7.68□□□□□ -1.18
LIN7C-201ENST00000278193 WASHC5Q12768 1159 aa7.68□□□□□ -1.18
LIN7C-201ENST00000278193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.68□□□□□ -1.18
LIN7C-201ENST00000278193 ACBD3Q9H3P7 528 aa7.68□□□□□ -1.18
LIN7C-201ENST00000278193 AKAP2Q9Y2D5 859 aa7.68□□□□□ -1.18
LIN7C-201ENST00000278193 VAMP1P23763 118 aa7.67□□□□□ -1.18
LIN7C-201ENST00000278193 MDM2Q00987 491 aaPredicted RBP7.67□□□□□ -1.18
LIN7C-201ENST00000278193 RNF34Q969K3 372 aa7.67□□□□□ -1.18
LIN7C-201ENST00000278193 GPR101Q96P66 508 aaPredicted RBP7.67□□□□□ -1.18
LIN7C-201ENST00000278193 PEG3Q9GZU2 1588 aa7.67□□□□□ -1.18
LIN7C-201ENST00000278193 BPNT1O95861 308 aa7.67□□□□□ -1.18
LIN7C-201ENST00000278193 ALDH1L2Q3SY69 923 aa7.67□□□□□ -1.18
LIN7C-201ENST00000278193 TTF2Q9UNY4 1162 aaKnown RBP7.67□□□□□ -1.18
LIN7C-201ENST00000278193 GNPATO15228 680 aa7.67□□□□□ -1.18
LIN7C-201ENST00000278193 HELQQ8TDG4 1101 aa7.67□□□□□ -1.18
LIN7C-201ENST00000278193 ZNF512BQ96KM6 892 aaPredicted RBP7.67□□□□□ -1.18
LIN7C-201ENST00000278193 PYGBP11216 843 aa7.67□□□□□ -1.18
LIN7C-201ENST00000278193 CASP2P42575 452 aa7.67□□□□□ -1.18
LIN7C-201ENST00000278193 SMAP1Q8IYB5 467 aaPredicted RBP7.67□□□□□ -1.18
LIN7C-201ENST00000278193 ATG3Q9NT62 314 aa7.67□□□□□ -1.18
LIN7C-201ENST00000278193 CLK2P49760 499 aaKnown RBP7.66□□□□□ -1.18
LIN7C-201ENST00000278193 GRAMD1BQ3KR37 738 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 LARP1BQ659C4 914 aaKnown RBP7.66□□□□□ -1.18
LIN7C-201ENST00000278193 C16orf87Q6PH81 154 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 GLYCTKQ8IVS8 523 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 GOLGA6L1Q8N7Z2 621 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 TMC1Q8TDI8 760 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 FRMD6Q96NE9 622 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 VTI1BQ9UEU0 232 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 CHIC2Q9UKJ5 165 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 TSPY2A6NKD2 308 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 TSPY3P0CV98 308 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 TSPY8P0CW00 308 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 TSPY1Q01534 308 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 NUCB1Q02818 461 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 ARMC3Q5W041 872 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 SNX32Q86XE0 403 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 TRIM63Q969Q1 353 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 NLRP2Q9NX02 1062 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 ZNF652Q9Y2D9 606 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 ALDH8A1Q9H2A2 487 aaPredicted RBP7.66□□□□□ -1.18
LIN7C-201ENST00000278193 IP6K2Q9UHH9 426 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 ASAP1Q9ULH1 1129 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 K7ELQ4 463 aaPredicted RBP7.66□□□□□ -1.18
LIN7C-201ENST00000278193 GEMIN4P57678 1058 aaKnown RBP7.66□□□□□ -1.18
LIN7C-201ENST00000278193 EPAS1Q99814 870 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 IER2Q9BTL4 223 aa7.66□□□□□ -1.18
LIN7C-201ENST00000278193 TRIM6Q9C030 488 aaPredicted RBP7.66□□□□□ -1.18
LIN7C-201ENST00000278193 SMTNL1A8MU46 457 aa7.65□□□□□ -1.18
LIN7C-201ENST00000278193 CDC27P30260 824 aa7.65□□□□□ -1.18
LIN7C-201ENST00000278193 VAC14Q08AM6 782 aa7.65□□□□□ -1.18
LIN7C-201ENST00000278193 CCSAPQ6IQ19 270 aaPredicted RBP7.65□□□□□ -1.18
LIN7C-201ENST00000278193 CKAP2LQ8IYA6 745 aa7.65□□□□□ -1.18
LIN7C-201ENST00000278193 POLG2Q9UHN1 485 aa7.65□□□□□ -1.18
LIN7C-201ENST00000278193 TMCO5BA8MYB1 307 aa7.65□□□□□ -1.18
LIN7C-201ENST00000278193 RNASEH2AO75792 299 aaKnown RBP7.65□□□□□ -1.18
LIN7C-201ENST00000278193 POLA1P09884 1462 aaPredicted RBP7.65□□□□□ -1.18
LIN7C-201ENST00000278193 RASSF7Q02833 373 aa7.65□□□□□ -1.18
LIN7C-201ENST00000278193 SNAPC4Q5SXM2 1469 aa7.65□□□□□ -1.18
LIN7C-201ENST00000278193 SRPK1Q96SB4 655 aaKnown RBP7.65□□□□□ -1.18
LIN7C-201ENST00000278193 RMI1Q9H9A7 625 aa7.65□□□□□ -1.18
LIN7C-201ENST00000278193 CT47A1Q5JQC4 288 aaPredicted RBP7.65□□□□□ -1.19
LIN7C-201ENST00000278193 KLHL10Q6JEL2 608 aa7.65□□□□□ -1.19
LIN7C-201ENST00000278193 CPXCR1Q8N123 301 aa7.65□□□□□ -1.19
LIN7C-201ENST00000278193 IFRD1O00458 451 aaPredicted RBP7.64□□□□□ -1.19
LIN7C-201ENST00000278193 KIF1CO43896 1103 aaKnown RBP7.64□□□□□ -1.19
LIN7C-201ENST00000278193 PDE1CQ14123 709 aaPredicted RBP7.64□□□□□ -1.19
LIN7C-201ENST00000278193 LONRF1Q17RB8 773 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 C8orf48Q96LL4 319 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 TPM3P06753 285 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 RBP3P10745 1247 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 ANKRD42Q8N9B4 389 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 FMNL2Q96PY5 1086 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.64□□□□□ -1.19
LIN7C-201ENST00000278193 ODF2LQ9ULJ1 636 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 MAGI1Q96QZ7 1491 aaPredicted RBP7.64□□□□□ -1.19
LIN7C-201ENST00000278193 PRG4Q92954 1404 aaPredicted RBP7.64□□□□□ -1.19
LIN7C-201ENST00000278193 SSTR3P32745 418 aaPredicted RBP7.64□□□□□ -1.19
LIN7C-201ENST00000278193 SPECC1Q5M775 1068 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 VMP1Q96GC9 406 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 C22orf23Q9BZE7 217 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 YY1AP1Q9H869 796 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 INF2Q27J81 1249 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 ZNF746Q6NUN9 644 aaPredicted RBP7.64□□□□□ -1.19
LIN7C-201ENST00000278193 RELL1Q8IUW5 271 aa7.64□□□□□ -1.19
LIN7C-201ENST00000278193 SLFNL1Q499Z3 407 aa7.63□□□□□ -1.19
LIN7C-201ENST00000278193 MTMR14Q8NCE2 650 aa7.63□□□□□ -1.19
LIN7C-201ENST00000278193 DNAI2Q9GZS0 605 aa7.63□□□□□ -1.19
LIN7C-201ENST00000278193 SYNRGQ9UMZ2 1314 aa7.63□□□□□ -1.19
LIN7C-201ENST00000278193 H3BRB1 525 aa7.63□□□□□ -1.19
LIN7C-201ENST00000278193 GNALP38405 381 aa7.63□□□□□ -1.19
LIN7C-201ENST00000278193 MAATS1Q7Z4T9 603 aa7.63□□□□□ -1.19
LIN7C-201ENST00000278193 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.63□□□□□ -1.193e-10■■■■□ 19.3
LIN7C-201ENST00000278193 TUT1Q9H6E5 874 aaKnown RBP7.63□□□□□ -1.19
LIN7C-201ENST00000278193 TRIM64CA6NLI5 447 aa7.63□□□□□ -1.19
LIN7C-201ENST00000278193 CLCN1P35523 988 aa7.63□□□□□ -1.19
LIN7C-201ENST00000278193 SNX16P57768 344 aa7.63□□□□□ -1.19
LIN7C-201ENST00000278193 GRM1Q13255 1194 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms