RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 TSR2Q969E8 191 aaKnown RBP10.98□□□□□ -0.65
TRIM43-201ENST00000272395 CHMP4BQ9H444 224 aaKnown RBP10.98□□□□□ -0.65
TRIM43-201ENST00000272395 SLC52A2Q9HAB3 445 aa10.98□□□□□ -0.65
TRIM43-201ENST00000272395 SSH1Q8WYL5 1049 aa10.97□□□□□ -0.65
TRIM43-201ENST00000272395 TBC1D32Q96NH3 1257 aa10.97□□□□□ -0.65
TRIM43-201ENST00000272395 ASAP1Q9ULH1 1129 aa10.97□□□□□ -0.65
TRIM43-201ENST00000272395 TNNQ9UQP3 1299 aa10.97□□□□□ -0.65
TRIM43-201ENST00000272395 CEMIPQ8WUJ3 1361 aa10.97□□□□□ -0.65
TRIM43-201ENST00000272395 TNS1Q9HBL0 1735 aaKnown RBP10.97□□□□□ -0.65
TRIM43-201ENST00000272395 SLC4A3P48751 1232 aa10.96□□□□□ -0.65
TRIM43-201ENST00000272395 KCNQ4P56696 695 aa10.96□□□□□ -0.65
TRIM43-201ENST00000272395 GSE1Q14687 1217 aa10.96□□□□□ -0.65
TRIM43-201ENST00000272395 EZH2Q15910 746 aaKnown RBP10.96□□□□□ -0.65
TRIM43-201ENST00000272395 CCDC125Q86Z20 511 aa10.96□□□□□ -0.65
TRIM43-201ENST00000272395 ATG3Q9NT62 314 aa10.96□□□□□ -0.65
TRIM43-201ENST00000272395 SBF2Q86WG5 1849 aa10.96□□□□□ -0.65
TRIM43-201ENST00000272395 MRC1P22897 1456 aa10.96□□□□□ -0.66
TRIM43-201ENST00000272395 HTATSF1O43719 755 aaKnown RBP10.95□□□□□ -0.66
TRIM43-201ENST00000272395 BAG6P46379 1132 aa10.95□□□□□ -0.66
TRIM43-201ENST00000272395 TEFQ10587 303 aa10.95□□□□□ -0.66
TRIM43-201ENST00000272395 SLC39A6Q13433 755 aa10.95□□□□□ -0.66
TRIM43-201ENST00000272395 SMC5Q8IY18 1101 aa10.95□□□□□ -0.66
TRIM43-201ENST00000272395 ARHGAP45Q92619 1136 aa10.95□□□□□ -0.66
TRIM43-201ENST00000272395 CAMKK2Q96RR4 588 aa10.95□□□□□ -0.66
TRIM43-201ENST00000272395 ZBTB40Q9NUA8 1239 aa10.95□□□□□ -0.66
TRIM43-201ENST00000272395 MIS18AQ9NYP9 233 aa10.95□□□□□ -0.66
TRIM43-201ENST00000272395 ADAMTS7Q9UKP4 1686 aa10.95□□□□□ -0.66
TRIM43-201ENST00000272395 PALLDQ8WX93 1383 aa10.94□□□□□ -0.66
TRIM43-201ENST00000272395 BTAF1O14981 1849 aa10.94□□□□□ -0.66
TRIM43-201ENST00000272395 KCNQ3O43525 872 aa10.94□□□□□ -0.66
TRIM43-201ENST00000272395 SEC24BO95487 1268 aa10.94□□□□□ -0.66
TRIM43-201ENST00000272395 LMOD3Q0VAK6 560 aa10.94□□□□□ -0.66
TRIM43-201ENST00000272395 ITPRIPQ8IWB1 547 aa10.94□□□□□ -0.66
TRIM43-201ENST00000272395 PROM2Q8N271 834 aa10.94□□□□□ -0.66
TRIM43-201ENST00000272395 NOB1Q9ULX3 412 aaKnown RBP10.94□□□□□ -0.66
TRIM43-201ENST00000272395 PTCD1O75127 700 aaKnown RBP10.93□□□□□ -0.66
TRIM43-201ENST00000272395 GNAI1P63096 354 aa10.93□□□□□ -0.66
TRIM43-201ENST00000272395 SCN11AQ9UI33 1791 aa10.93□□□□□ -0.66
TRIM43-201ENST00000272395 BTBD11A6QL63 1104 aa10.92□□□□□ -0.66
TRIM43-201ENST00000272395 PLSCR1O15162 318 aa10.92□□□□□ -0.66
TRIM43-201ENST00000272395 TXNRD1Q16881 649 aa10.92□□□□□ -0.66
TRIM43-201ENST00000272395 LRRC4BQ9NT99 713 aa10.92□□□□□ -0.66
TRIM43-201ENST00000272395 IFT57Q9NWB7 429 aa10.92□□□□□ -0.66
TRIM43-201ENST00000272395 ITGB4P16144 1822 aa10.92□□□□□ -0.66
TRIM43-201ENST00000272395 TAF7Q15545 349 aaPredicted RBP10.92□□□□□ -0.66
TRIM43-201ENST00000272395 SLC4A9Q96Q91 983 aa10.92□□□□□ -0.66
TRIM43-201ENST00000272395 RBM42Q9BTD8 480 aaKnown RBP10.92□□□□□ -0.66
TRIM43-201ENST00000272395 LOC102724428A0A0B4J2F2 783 aa10.91□□□□□ -0.66
TRIM43-201ENST00000272395 SIK1P57059 783 aa10.91□□□□□ -0.66
TRIM43-201ENST00000272395 TMEM57Q8N5G2 664 aa10.91□□□□□ -0.66
TRIM43-201ENST00000272395 SMARCC1Q92922 1105 aaPredicted RBP10.91□□□□□ -0.66
TRIM43-201ENST00000272395 CCNL1Q9UK58 526 aaPredicted RBP10.91□□□□□ -0.66
TRIM43-201ENST00000272395 ZNF853P0CG23 659 aa10.9□□□□□ -0.66
TRIM43-201ENST00000272395 NUCB1Q02818 461 aa10.9□□□□□ -0.66
TRIM43-201ENST00000272395 ITPK1Q13572 414 aa10.9□□□□□ -0.66
TRIM43-201ENST00000272395 ZNF790Q6PG37 636 aa10.9□□□□□ -0.66
TRIM43-201ENST00000272395 KCPQ6ZWJ8 1503 aa10.9□□□□□ -0.67
TRIM43-201ENST00000272395 KAT6BQ8WYB5 2073 aa10.89□□□□□ -0.67
TRIM43-201ENST00000272395 FRAT2O75474 233 aaPredicted RBP10.89□□□□□ -0.67
TRIM43-201ENST00000272395 TTC5Q8N0Z6 440 aa10.89□□□□□ -0.67
TRIM43-201ENST00000272395 ZNF496Q96IT1 587 aaPredicted RBP10.89□□□□□ -0.67
TRIM43-201ENST00000272395 ANTXR1Q9H6X2 564 aa10.89□□□□□ -0.67
TRIM43-201ENST00000272395 TSPYL4Q9UJ04 414 aa10.89□□□□□ -0.67
TRIM43-201ENST00000272395 ATP6V1AP38606 617 aa10.89□□□□□ -0.67
TRIM43-201ENST00000272395 GCC1Q96CN9 775 aa10.89□□□□□ -0.67
TRIM43-201ENST00000272395 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
TRIM43-201ENST00000272395 PAPPAQ13219 1627 aa10.88□□□□□ -0.67
TRIM43-201ENST00000272395 PRAMEF22A3QJZ6 481 aa10.88□□□□□ -0.67
TRIM43-201ENST00000272395 EIF5BO60841 1220 aaKnown RBP10.88□□□□□ -0.67
TRIM43-201ENST00000272395 VAMP4O75379 141 aa10.88□□□□□ -0.67
TRIM43-201ENST00000272395 SLC27A3Q5K4L6 730 aa10.88□□□□□ -0.67
TRIM43-201ENST00000272395 MRPL50Q8N5N7 158 aaKnown RBP10.88□□□□□ -0.67
TRIM43-201ENST00000272395 LINC00116Q8NCU8 138 aa10.88□□□□□ -0.67
TRIM43-201ENST00000272395 SIPA1L3O60292 1781 aaPredicted RBP10.88□□□□□ -0.67
TRIM43-201ENST00000272395 CHL1O00533 1208 aa10.87□□□□□ -0.67
TRIM43-201ENST00000272395 ABCC4O15439 1325 aa10.87□□□□□ -0.67
TRIM43-201ENST00000272395 ZNF827Q17R98 1081 aa10.87□□□□□ -0.67
TRIM43-201ENST00000272395 KRT24Q2M2I5 525 aa10.87□□□□□ -0.67
TRIM43-201ENST00000272395 DNAJC10Q8IXB1 793 aa10.87□□□□□ -0.67
TRIM43-201ENST00000272395 CFAP44Q96MT7 982 aa10.87□□□□□ -0.67
TRIM43-201ENST00000272395 TBC1D2Q9BYX2 928 aa10.87□□□□□ -0.67
TRIM43-201ENST00000272395 C22orf23Q9BZE7 217 aa10.87□□□□□ -0.67
TRIM43-201ENST00000272395 MBIPQ9NS73 344 aa10.87□□□□□ -0.67
TRIM43-201ENST00000272395 EIF4A1P60842 406 aaKnown RBP10.86□□□□□ -0.67
TRIM43-201ENST00000272395 SMIM5Q71RC9 77 aa10.86□□□□□ -0.67
TRIM43-201ENST00000272395 CHD1LQ86WJ1 897 aa10.86□□□□□ -0.67
TRIM43-201ENST00000272395 FMNL2Q96PY5 1086 aa10.86□□□□□ -0.67
TRIM43-201ENST00000272395 API5Q9BZZ5 524 aaKnown RBP10.86□□□□□ -0.67
TRIM43-201ENST00000272395 HEG1Q9ULI3 1381 aa10.86□□□□□ -0.67
TRIM43-201ENST00000272395 ZBTB7BO15156 539 aaPredicted RBP10.85□□□□□ -0.67
TRIM43-201ENST00000272395 BMP2KLQ5H9B9 411 aa10.85□□□□□ -0.67
TRIM43-201ENST00000272395 RGPD3A6NKT7 1758 aaPredicted RBP10.85□□□□□ -0.67
TRIM43-201ENST00000272395 RGPD4Q7Z3J3 1758 aa10.85□□□□□ -0.67
TRIM43-201ENST00000272395 LY75O60449 1722 aa10.85□□□□□ -0.67
TRIM43-201ENST00000272395 RREB1Q92766 1687 aa10.85□□□□□ -0.67
TRIM43-201ENST00000272395 NUP188Q5SRE5 1749 aa10.85□□□□□ -0.67
TRIM43-201ENST00000272395 RBM25P49756 843 aaKnown RBP10.85□□□□□ -0.67
TRIM43-201ENST00000272395 AMIGO3Q86WK7 504 aa10.85□□□□□ -0.67
TRIM43-201ENST00000272395 PSDA5PKW4 1024 aaPredicted RBP10.84□□□□□ -0.67
TRIM43-201ENST00000272395 TWISTNBQ3B726 338 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms