RNA–Protein interactions for RNA: ENST00000271636.11

CGN-201, Transcript of cingulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGN, Length 5,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-201ENST00000271636 TPM4P67936 248 aa17.85■□□□□ 0.45
CGN-201ENST00000271636 KRT32Q14532 448 aa17.85■□□□□ 0.45
CGN-201ENST00000271636 MBD3O95983 291 aa17.85■□□□□ 0.45
CGN-201ENST00000271636 PPP1R42Q7Z4L9 355 aa17.85■□□□□ 0.45
CGN-201ENST00000271636 AMOTL1Q8IY63 956 aa17.85■□□□□ 0.45
CGN-201ENST00000271636 CNNM1Q9NRU3 951 aa17.85■□□□□ 0.45
CGN-201ENST00000271636 NUTM1Q86Y26 1132 aa17.85■□□□□ 0.45
CGN-201ENST00000271636 ZSCAN31Q96LW9 406 aaPredicted RBP17.85■□□□□ 0.45
CGN-201ENST00000271636 NOL10Q9BSC4 688 aaKnown RBP17.85■□□□□ 0.45
CGN-201ENST00000271636 AKAP2Q9Y2D5 859 aa17.85■□□□□ 0.45
CGN-201ENST00000271636 APPP05067 770 aa17.84■□□□□ 0.45
CGN-201ENST00000271636 PNPLA6Q8IY17 1366 aa17.84■□□□□ 0.45
CGN-201ENST00000271636 PTCH1Q13635 1447 aa17.84■□□□□ 0.45
CGN-201ENST00000271636 IGSF1Q8N6C5 1336 aa17.84■□□□□ 0.45
CGN-201ENST00000271636 CHRNA2Q15822 529 aa17.84■□□□□ 0.45
CGN-201ENST00000271636 ORAI2Q96SN7 254 aa17.84■□□□□ 0.45
CGN-201ENST00000271636 ABCC4O15439 1325 aa17.84■□□□□ 0.45
CGN-201ENST00000271636 CDC42BPGQ6DT37 1551 aa17.84■□□□□ 0.45
CGN-201ENST00000271636 CPLX1O14810 134 aa17.84■□□□□ 0.45
CGN-201ENST00000271636 KIAA2012Q0VF49 1180 aa17.84■□□□□ 0.45
CGN-201ENST00000271636 SF3A1Q15459 793 aaKnown RBP17.83■□□□□ 0.45
CGN-201ENST00000271636 MCTP1Q6DN14 999 aa17.83■□□□□ 0.44
CGN-201ENST00000271636 RICTORQ6R327 1708 aa17.83■□□□□ 0.44
CGN-201ENST00000271636 MYO3AQ8NEV4 1616 aa17.83■□□□□ 0.44
CGN-201ENST00000271636 EXOC5O00471 708 aa17.82■□□□□ 0.44
CGN-201ENST00000271636 LINS1Q8NG48 757 aa17.82■□□□□ 0.44
CGN-201ENST00000271636 ECHDC1Q9NTX5 307 aa17.82■□□□□ 0.44
CGN-201ENST00000271636 TMEM131LA2VDJ0 1609 aa17.82■□□□□ 0.44
CGN-201ENST00000271636 TRAK2O60296 914 aa17.82■□□□□ 0.44
CGN-201ENST00000271636 ANKRD13DQ6ZTN6 518 aa17.82■□□□□ 0.44
CGN-201ENST00000271636 PCDH11XQ9BZA7 1347 aa17.82■□□□□ 0.44
CGN-201ENST00000271636 PCDH11YQ9BZA8 1340 aa17.82■□□□□ 0.44
CGN-201ENST00000271636 CPSF1Q10570 1443 aaKnown RBP17.81■□□□□ 0.44
CGN-201ENST00000271636 PTCD1O75127 700 aaKnown RBP17.81■□□□□ 0.44
CGN-201ENST00000271636 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
CGN-201ENST00000271636 G3V3G9 751 aa17.81■□□□□ 0.44
CGN-201ENST00000271636 AKAP17AQ02040 695 aaKnown RBP17.81■□□□□ 0.44
CGN-201ENST00000271636 DCAF8Q5TAQ9 597 aa17.81■□□□□ 0.44
CGN-201ENST00000271636 IL2RBP14784 551 aa17.81■□□□□ 0.44
CGN-201ENST00000271636 TRIM29Q14134 588 aa17.81■□□□□ 0.44
CGN-201ENST00000271636 EVI5LQ96CN4 794 aa17.81■□□□□ 0.44
CGN-201ENST00000271636 ARID3AQ99856 593 aa17.81■□□□□ 0.44
CGN-201ENST00000271636 WDR33Q9C0J8 1336 aaKnown RBP17.81■□□□□ 0.44
CGN-201ENST00000271636 TBC1D2Q9BYX2 928 aa17.8■□□□□ 0.44
CGN-201ENST00000271636 GNL3LQ9NVN8 582 aaKnown RBP17.8■□□□□ 0.44
CGN-201ENST00000271636 ERICH2A1L162 156 aa17.8■□□□□ 0.44
CGN-201ENST00000271636 RHPN1Q8TCX5 695 aa17.8■□□□□ 0.44
CGN-201ENST00000271636 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
CGN-201ENST00000271636 VPS37CA5D8V6 355 aaPredicted RBP17.8■□□□□ 0.44
CGN-201ENST00000271636 A0A087WZG4 1122 aa17.8■□□□□ 0.44
CGN-201ENST00000271636 HSP90AA2PQ14568 343 aaPredicted RBP17.8■□□□□ 0.44
CGN-201ENST00000271636 KRT24Q2M2I5 525 aa17.8■□□□□ 0.44
CGN-201ENST00000271636 CWC27Q6UX04 472 aaKnown RBP17.8■□□□□ 0.44
CGN-201ENST00000271636 ZNF652Q9Y2D9 606 aa17.8■□□□□ 0.44
CGN-201ENST00000271636 TECPR2O15040 1411 aa17.8■□□□□ 0.44
CGN-201ENST00000271636 GRM8O00222 908 aa17.79■□□□□ 0.44
CGN-201ENST00000271636 CTNNA3Q9UI47 895 aa17.79■□□□□ 0.44
CGN-201ENST00000271636 PDE1AP54750 535 aa17.79■□□□□ 0.44
CGN-201ENST00000271636 NUTM2BA6NNL0 878 aaPredicted RBP17.79■□□□□ 0.44
CGN-201ENST00000271636 NUTM2EB1AL46 878 aaPredicted RBP17.79■□□□□ 0.44
CGN-201ENST00000271636 MRE11P49959 708 aa17.79■□□□□ 0.44
CGN-201ENST00000271636 NUTM2AQ8IVF1 878 aaPredicted RBP17.79■□□□□ 0.44
CGN-201ENST00000271636 ZNF853P0CG23 659 aa17.78■□□□□ 0.44
CGN-201ENST00000271636 DHX16O60231 1041 aaKnown RBP17.78■□□□□ 0.44
CGN-201ENST00000271636 MAP4K4O95819 1239 aaPredicted RBP17.78■□□□□ 0.44
CGN-201ENST00000271636 DDX21Q9NR30 783 aaKnown RBP eCLIP17.78■□□□□ 0.44
CGN-201ENST00000271636 NBPF6Q5VWK0 638 aa17.78■□□□□ 0.44
CGN-201ENST00000271636 NBPF4Q96M43 638 aa17.78■□□□□ 0.44
CGN-201ENST00000271636 BLOC1S2Q6QNY1 142 aa17.77■□□□□ 0.44
CGN-201ENST00000271636 USP31Q70CQ4 1352 aa17.77■□□□□ 0.44
CGN-201ENST00000271636 LETM1O95202 739 aaPredicted RBP17.77■□□□□ 0.44
CGN-201ENST00000271636 MCM4P33991 863 aa17.77■□□□□ 0.44
CGN-201ENST00000271636 MPHOSPH8Q99549 860 aa17.77■□□□□ 0.44
CGN-201ENST00000271636 USP32Q8NFA0 1604 aa17.77■□□□□ 0.43
CGN-201ENST00000271636 XAGE3Q8WTP9 111 aa17.76■□□□□ 0.43
CGN-201ENST00000271636 SNX21Q969T3 373 aa17.76■□□□□ 0.43
CGN-201ENST00000271636 TTC41PQ6P2S7 1318 aa17.76■□□□□ 0.43
CGN-201ENST00000271636 SDSP20132 328 aa17.76■□□□□ 0.43
CGN-201ENST00000271636 HSPA2P54652 639 aa17.76■□□□□ 0.43
CGN-201ENST00000271636 PDRG1Q9NUG6 133 aa17.76■□□□□ 0.43
CGN-201ENST00000271636 ADGRL3Q9HAR2 1447 aa17.76■□□□□ 0.43
CGN-201ENST00000271636 ANAPC15P60006 121 aa17.75■□□□□ 0.43
CGN-201ENST00000271636 SART3Q15020 963 aaKnown RBP17.75■□□□□ 0.43
CGN-201ENST00000271636 NFXL1Q6ZNB6 911 aa17.75■□□□□ 0.43
CGN-201ENST00000271636 AOX1Q06278 1338 aa17.74■□□□□ 0.43
CGN-201ENST00000271636 COPS6Q7L5N1 327 aa17.74■□□□□ 0.43
CGN-201ENST00000271636 VSIG10Q8N0Z9 540 aa17.74■□□□□ 0.43
CGN-201ENST00000271636 IFIT5Q13325 482 aaKnown RBP17.74■□□□□ 0.43
CGN-201ENST00000271636 PLEKHM2Q8IWE5 1019 aa17.74■□□□□ 0.43
CGN-201ENST00000271636 JAKMIP1Q96N16 626 aaKnown RBP17.74■□□□□ 0.43
CGN-201ENST00000271636 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
CGN-201ENST00000271636 NFATC2IPQ8NCF5 419 aa17.74■□□□□ 0.43
CGN-201ENST00000271636 SH2B1Q9NRF2 756 aaPredicted RBP17.73■□□□□ 0.43
CGN-201ENST00000271636 ZNF790Q6PG37 636 aa17.73■□□□□ 0.43
CGN-201ENST00000271636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.73■□□□□ 0.43
CGN-201ENST00000271636 IGHMBP2P38935 993 aaKnown RBP17.73■□□□□ 0.43
CGN-201ENST00000271636 TMEM94Q12767 1356 aa17.73■□□□□ 0.43
CGN-201ENST00000271636 ANXA1P04083 346 aa17.73■□□□□ 0.43
CGN-201ENST00000271636 EIF4A1P60842 406 aaKnown RBP17.73■□□□□ 0.43
CGN-201ENST00000271636 CABLES1Q8TDN4 633 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms