RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 C6orf229H3BNL8 230 aa16.26■□□□□ 0.19
NPC1-201ENST00000269228 KINO60870 393 aaKnown RBP16.26■□□□□ 0.19
NPC1-201ENST00000269228 DZIP1Q86YF9 867 aaKnown RBP16.26■□□□□ 0.19
NPC1-201ENST00000269228 PRKCSHP14314 528 aaPredicted RBP16.26■□□□□ 0.19
NPC1-201ENST00000269228 USP5P45974 858 aa16.26■□□□□ 0.19
NPC1-201ENST00000269228 MEIS3Q99687 375 aa16.26■□□□□ 0.19
NPC1-201ENST00000269228 IPO7O95373 1038 aaKnown RBP16.26■□□□□ 0.19
NPC1-201ENST00000269228 CDC5LQ99459 802 aaKnown RBP16.26■□□□□ 0.19
NPC1-201ENST00000269228 UPF3BQ9BZI7 483 aaKnown RBP16.26■□□□□ 0.19
NPC1-201ENST00000269228 CAVIN1Q6NZI2 390 aaKnown RBP16.25■□□□□ 0.19
NPC1-201ENST00000269228 ARHGAP45Q92619 1136 aa16.25■□□□□ 0.19
NPC1-201ENST00000269228 SNRKQ9NRH2 765 aa16.25■□□□□ 0.19
NPC1-201ENST00000269228 ZFYVE9O95405 1425 aa16.25■□□□□ 0.19
NPC1-201ENST00000269228 KRT24Q2M2I5 525 aa16.25■□□□□ 0.19
NPC1-201ENST00000269228 NBPF6Q5VWK0 638 aa16.25■□□□□ 0.19
NPC1-201ENST00000269228 OLFM4Q6UX06 510 aa16.25■□□□□ 0.19
NPC1-201ENST00000269228 DDX46Q7L014 1031 aaKnown RBP16.25■□□□□ 0.19
NPC1-201ENST00000269228 NBPF5PQ86XG9 351 aaPredicted RBP16.25■□□□□ 0.19
NPC1-201ENST00000269228 NBPF4Q96M43 638 aa16.25■□□□□ 0.19
NPC1-201ENST00000269228 MYO5CQ9NQX4 1742 aa16.25■□□□□ 0.19
NPC1-201ENST00000269228 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
NPC1-201ENST00000269228 ECHDC1Q9NTX5 307 aa16.25■□□□□ 0.19
NPC1-201ENST00000269228 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
NPC1-201ENST00000269228 SOGA3Q5TF21 947 aa16.24■□□□□ 0.19
NPC1-201ENST00000269228 RNF214Q8ND24 703 aa16.24■□□□□ 0.19
NPC1-201ENST00000269228 CDK5RAP3Q96JB5 506 aa16.24■□□□□ 0.19
NPC1-201ENST00000269228 ZSCAN31Q96LW9 406 aaPredicted RBP16.24■□□□□ 0.19
NPC1-201ENST00000269228 NAPBQ9H115 298 aa16.24■□□□□ 0.19
NPC1-201ENST00000269228 COL17A1Q9UMD9 1497 aaPredicted RBP16.24■□□□□ 0.19
NPC1-201ENST00000269228 TRAK2O60296 914 aa16.24■□□□□ 0.19
NPC1-201ENST00000269228 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
NPC1-201ENST00000269228 POLR3DP05423 398 aaPredicted RBP16.24■□□□□ 0.19
NPC1-201ENST00000269228 DDX17Q92841 729 aaKnown RBP16.24■□□□□ 0.19
NPC1-201ENST00000269228 WDR33Q9C0J8 1336 aaKnown RBP16.24■□□□□ 0.19
NPC1-201ENST00000269228 MBD3O95983 291 aa16.23■□□□□ 0.19
NPC1-201ENST00000269228 MAP3K5Q99683 1374 aa16.23■□□□□ 0.19
NPC1-201ENST00000269228 TSPYL6Q8N831 410 aa16.23■□□□□ 0.19
NPC1-201ENST00000269228 TXLNAP40222 546 aa16.23■□□□□ 0.19
NPC1-201ENST00000269228 TSHZ3Q63HK5 1081 aa16.23■□□□□ 0.19
NPC1-201ENST00000269228 MRPL50Q8N5N7 158 aaKnown RBP16.23■□□□□ 0.19
NPC1-201ENST00000269228 DCAF5Q96JK2 942 aa16.23■□□□□ 0.19
NPC1-201ENST00000269228 MBD5Q9P267 1494 aa16.23■□□□□ 0.19
NPC1-201ENST00000269228 CDKL5O76039 1030 aa16.23■□□□□ 0.19
NPC1-201ENST00000269228 KSR2Q6VAB6 950 aa16.22■□□□□ 0.19
NPC1-201ENST00000269228 PIK3C2GO75747 1445 aa16.22■□□□□ 0.19
NPC1-201ENST00000269228 GOLIM4O00461 696 aa16.22■□□□□ 0.19
NPC1-201ENST00000269228 CCAR2Q8N163 923 aaKnown RBP16.22■□□□□ 0.19
NPC1-201ENST00000269228 JMYQ8N9B5 988 aa16.22■□□□□ 0.19
NPC1-201ENST00000269228 NAT10Q9H0A0 1025 aaKnown RBP16.22■□□□□ 0.19
NPC1-201ENST00000269228 IGHDP01880 384 aa16.22■□□□□ 0.19
NPC1-201ENST00000269228 DDX11Q96FC9 970 aa16.22■□□□□ 0.19
NPC1-201ENST00000269228 RSPH6AQ9H0K4 717 aa16.22■□□□□ 0.19
NPC1-201ENST00000269228 CHD1O14646 1710 aa16.21■□□□□ 0.19
NPC1-201ENST00000269228 MPHOSPH10O00566 681 aaKnown RBP16.21■□□□□ 0.19
NPC1-201ENST00000269228 SIRT1Q96EB6 747 aa16.21■□□□□ 0.19
NPC1-201ENST00000269228 ARHGEF5Q12774 1597 aa16.21■□□□□ 0.19
NPC1-201ENST00000269228 MKNK2Q9HBH9 465 aa16.21■□□□□ 0.19
NPC1-201ENST00000269228 EDC4Q6P2E9 1401 aaKnown RBP16.21■□□□□ 0.19
NPC1-201ENST00000269228 ME1P48163 572 aa16.21■□□□□ 0.19
NPC1-201ENST00000269228 ZNF622Q969S3 477 aaKnown RBP eCLIP16.21■□□□□ 0.19
NPC1-201ENST00000269228 CRACR2BQ8N4Y2 399 aaPredicted RBP16.21■□□□□ 0.18
NPC1-201ENST00000269228 RNMTO43148 476 aaKnown RBP16.2■□□□□ 0.18
NPC1-201ENST00000269228 ZNF592Q92610 1267 aa16.2■□□□□ 0.18
NPC1-201ENST00000269228 SETDB2Q96T68 719 aa16.2■□□□□ 0.18
NPC1-201ENST00000269228 GRM8O00222 908 aa16.2■□□□□ 0.18
NPC1-201ENST00000269228 KRT85P78386 507 aa16.2■□□□□ 0.18
NPC1-201ENST00000269228 SLAIN2Q9P270 581 aa16.2■□□□□ 0.18
NPC1-201ENST00000269228 VAMP4O75379 141 aa16.19■□□□□ 0.18
NPC1-201ENST00000269228 CCDC152Q4G0S7 254 aa16.19■□□□□ 0.18
NPC1-201ENST00000269228 LMBR1LQ6UX01 489 aa16.19■□□□□ 0.18
NPC1-201ENST00000269228 RHPN1Q8TCX5 695 aa16.19■□□□□ 0.18
NPC1-201ENST00000269228 NIP7Q9Y221 180 aaKnown RBP eCLIP16.19■□□□□ 0.18
NPC1-201ENST00000269228 EVI5LQ96CN4 794 aa16.19■□□□□ 0.18
NPC1-201ENST00000269228 ALDH1L1O75891 902 aa16.19■□□□□ 0.18
NPC1-201ENST00000269228 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
NPC1-201ENST00000269228 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
NPC1-201ENST00000269228 KRT18P05783 430 aaKnown RBP16.19■□□□□ 0.18
NPC1-201ENST00000269228 ZNF287Q9HBT7 754 aa16.19■□□□□ 0.18
NPC1-201ENST00000269228 CFAP74Q9C0B2 1584 aa16.19■□□□□ 0.18
NPC1-201ENST00000269228 HSP90AA2PQ14568 343 aaPredicted RBP16.18■□□□□ 0.18
NPC1-201ENST00000269228 DZIP3Q86Y13 1208 aaKnown RBP16.18■□□□□ 0.18
NPC1-201ENST00000269228 SBNO1A3KN83 1393 aa16.18■□□□□ 0.18
NPC1-201ENST00000269228 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
NPC1-201ENST00000269228 RANBP6O60518 1105 aaKnown RBP16.18■□□□□ 0.18
NPC1-201ENST00000269228 ST5P78524 1137 aa16.18■□□□□ 0.18
NPC1-201ENST00000269228 CCDC83Q8IWF9 413 aa16.18■□□□□ 0.18
NPC1-201ENST00000269228 IL13P35225 146 aa16.17■□□□□ 0.18
NPC1-201ENST00000269228 ZNF213O14771 459 aa16.17■□□□□ 0.18
NPC1-201ENST00000269228 NOL7Q9UMY1 257 aaKnown RBP16.17■□□□□ 0.18
NPC1-201ENST00000269228 TNNQ9UQP3 1299 aa16.17■□□□□ 0.18
NPC1-201ENST00000269228 PCDHB15Q9Y5E8 787 aa16.17■□□□□ 0.18
NPC1-201ENST00000269228 HOMER1Q86YM7 354 aa16.17■□□□□ 0.18
NPC1-201ENST00000269228 ADGBQ8N7X0 1667 aa16.17■□□□□ 0.18
NPC1-201ENST00000269228 EPS15P42566 896 aa16.16■□□□□ 0.18
NPC1-201ENST00000269228 LINS1Q8NG48 757 aa16.16■□□□□ 0.18
NPC1-201ENST00000269228 R3HCC1Q9Y3T6 440 aaKnown RBP16.16■□□□□ 0.18
NPC1-201ENST00000269228 SAMD9LQ8IVG5 1584 aa16.16■□□□□ 0.18
NPC1-201ENST00000269228 TSPOAP1O95153 1857 aa16.16■□□□□ 0.18
NPC1-201ENST00000269228 CWF19L2Q2TBE0 894 aaKnown RBP16.16■□□□□ 0.18
NPC1-201ENST00000269228 NLRP3Q96P20 1036 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms