RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ZC3H13Q5T200 1668 aaKnown RBP10.52□□□□□ -0.73
VAPB-201ENST00000265619 FUCA2Q9BTY2 467 aa10.52□□□□□ -0.73
VAPB-201ENST00000265619 EXOC6BQ9Y2D4 811 aa10.52□□□□□ -0.73
VAPB-201ENST00000265619 IFT57Q9NWB7 429 aa10.51□□□□□ -0.73
VAPB-201ENST00000265619 AGLP35573 1532 aa10.51□□□□□ -0.73
VAPB-201ENST00000265619 SYT10Q6XYQ8 523 aa10.51□□□□□ -0.73
VAPB-201ENST00000265619 CCDC186Q7Z3E2 898 aa10.51□□□□□ -0.73
VAPB-201ENST00000265619 ANKLE2Q86XL3 938 aa10.51□□□□□ -0.73
VAPB-201ENST00000265619 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.51□□□□□ -0.73
VAPB-201ENST00000265619 HDAC5Q9UQL6 1122 aa10.51□□□□□ -0.73
VAPB-201ENST00000265619 ROBO2Q9HCK4 1378 aa10.51□□□□□ -0.73
VAPB-201ENST00000265619 ZBTB7BO15156 539 aaPredicted RBP10.51□□□□□ -0.73
VAPB-201ENST00000265619 DHX16O60231 1041 aaKnown RBP10.51□□□□□ -0.73
VAPB-201ENST00000265619 POLKQ9UBT6 870 aa10.51□□□□□ -0.73
VAPB-201ENST00000265619 IFT172Q9UG01 1749 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 NRXN1Q9ULB1 1477 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 NEK4P51957 841 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 C10orf67Q8IYJ2 551 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 TULP4Q9NRJ4 1543 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 ST5P78524 1137 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 ARID5BQ14865 1188 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 SYCP1Q15431 976 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 COG3Q96JB2 828 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 CCDC61Q9Y6R9 512 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 APBB1O00213 710 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 ST18O60284 1047 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 MMP14P50281 582 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 FAM184AQ8NB25 1140 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 CCDC112Q8NEF3 446 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 ZNF397Q8NF99 534 aaPredicted RBP10.5□□□□□ -0.73
VAPB-201ENST00000265619 KIF1BPQ96EK5 621 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 NOL10Q9BSC4 688 aaKnown RBP10.5□□□□□ -0.73
VAPB-201ENST00000265619 TOMM22Q9NS69 142 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 PALD1Q9ULE6 856 aa10.5□□□□□ -0.73
VAPB-201ENST00000265619 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
VAPB-201ENST00000265619 SDSP20132 328 aa10.49□□□□□ -0.73
VAPB-201ENST00000265619 TSGA10IPQ3SY00 556 aa10.49□□□□□ -0.73
VAPB-201ENST00000265619 CCDC183Q5T5S1 534 aa10.49□□□□□ -0.73
VAPB-201ENST00000265619 SYTL4Q96C24 671 aaPredicted RBP10.49□□□□□ -0.73
VAPB-201ENST00000265619 TTC22Q5TAA0 569 aa10.49□□□□□ -0.73
VAPB-201ENST00000265619 SYAP1Q96A49 352 aaPredicted RBP10.49□□□□□ -0.73
VAPB-201ENST00000265619 MX1P20591 662 aa10.48□□□□□ -0.73
VAPB-201ENST00000265619 TNNT3P45378 269 aaPredicted RBP10.48□□□□□ -0.73
VAPB-201ENST00000265619 CCDC27Q2M243 656 aa10.48□□□□□ -0.73
VAPB-201ENST00000265619 ESCO1Q5FWF5 840 aa10.48□□□□□ -0.73
VAPB-201ENST00000265619 LARP6Q9BRS8 491 aaKnown RBP10.48□□□□□ -0.73
VAPB-201ENST00000265619 SRCIN1Q9C0H9 1055 aa10.48□□□□□ -0.73
VAPB-201ENST00000265619 FHOD1Q9Y613 1164 aa10.48□□□□□ -0.73
VAPB-201ENST00000265619 PTPRMP28827 1452 aa10.48□□□□□ -0.73
VAPB-201ENST00000265619 ACEP12821 1306 aa10.48□□□□□ -0.73
VAPB-201ENST00000265619 POLR3GO15318 223 aaPredicted RBP10.48□□□□□ -0.73
VAPB-201ENST00000265619 PLA2G4AP47712 749 aa10.48□□□□□ -0.73
VAPB-201ENST00000265619 CCDC144BQ3MJ40 725 aa10.48□□□□□ -0.73
VAPB-201ENST00000265619 LUZP1Q86V48 1076 aa10.48□□□□□ -0.73
VAPB-201ENST00000265619 CCDC144CPQ8IYA2 1237 aa10.48□□□□□ -0.73
VAPB-201ENST00000265619 ZCCHC17Q9NP64 241 aaKnown RBP10.48□□□□□ -0.73
VAPB-201ENST00000265619 PRR36Q9H6K5 1346 aa10.48□□□□□ -0.73
VAPB-201ENST00000265619 ELL2O00472 640 aaPredicted RBP10.47□□□□□ -0.73
VAPB-201ENST00000265619 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
VAPB-201ENST00000265619 THUMPD2Q9BTF0 503 aaKnown RBP10.47□□□□□ -0.73
VAPB-201ENST00000265619 CACTINQ8WUQ7 758 aaKnown RBP10.47□□□□□ -0.73
VAPB-201ENST00000265619 GEMIN8Q9NWZ8 242 aaKnown RBP10.47□□□□□ -0.73
VAPB-201ENST00000265619 SPATA31D1Q6ZQQ2 1576 aa10.47□□□□□ -0.73
VAPB-201ENST00000265619 KNDC1Q76NI1 1749 aa10.47□□□□□ -0.73
VAPB-201ENST00000265619 DIAPH1O60610 1272 aaKnown RBP10.47□□□□□ -0.73
VAPB-201ENST00000265619 GCC1Q96CN9 775 aa10.47□□□□□ -0.73
VAPB-201ENST00000265619 PHF14O94880 888 aa10.46□□□□□ -0.73
VAPB-201ENST00000265619 TPD52L1Q16890 204 aaPredicted RBP10.46□□□□□ -0.73
VAPB-201ENST00000265619 ZSCAN25Q6NSZ9 544 aa10.46□□□□□ -0.73
VAPB-201ENST00000265619 KRBA2Q6ZNG9 492 aa10.46□□□□□ -0.73
VAPB-201ENST00000265619 ATG3Q9NT62 314 aa10.46□□□□□ -0.73
VAPB-201ENST00000265619 ARHGEF28Q8N1W1 1705 aaKnown RBP10.46□□□□□ -0.73
VAPB-201ENST00000265619 NLRP6P59044 892 aa10.46□□□□□ -0.73
VAPB-201ENST00000265619 CNPY4Q8N129 248 aa10.46□□□□□ -0.73
VAPB-201ENST00000265619 SMARCE1Q969G3 411 aa10.46□□□□□ -0.73
VAPB-201ENST00000265619 UPF3BQ9BZI7 483 aaKnown RBP10.46□□□□□ -0.73
VAPB-201ENST00000265619 MYO1CO00159 1063 aa10.46□□□□□ -0.74
VAPB-201ENST00000265619 FIBPO43427 364 aa10.46□□□□□ -0.74
VAPB-201ENST00000265619 CT47A1Q5JQC4 288 aaPredicted RBP10.46□□□□□ -0.74
VAPB-201ENST00000265619 CEP135Q66GS9 1140 aa10.46□□□□□ -0.74
VAPB-201ENST00000265619 KIAA1210Q9ULL0 1709 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 RIMS1Q86UR5 1692 aaKnown RBP10.45□□□□□ -0.74
VAPB-201ENST00000265619 RPAP1Q9BWH6 1393 aaPredicted RBP10.45□□□□□ -0.74
VAPB-201ENST00000265619 GTF2A1P52655 376 aaPredicted RBP10.45□□□□□ -0.74
VAPB-201ENST00000265619 TSHZ3Q63HK5 1081 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 PROSER2Q86WR7 435 aaPredicted RBP10.45□□□□□ -0.74
VAPB-201ENST00000265619 RASSF4Q9H2L5 321 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 EFCC1Q9HA90 598 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 CHMP3Q9Y3E7 222 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 FER1L4A9Z1Z3 1794 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 SBNO2Q9Y2G9 1366 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 PTPRCP08575 1304 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 PRKAR2BP31323 418 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 CUL4AQ13619 759 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 ERCC6LQ2NKX8 1250 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 YY1AP1Q9H869 796 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 SETBP1Q9Y6X0 1596 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 FOXO3O43524 673 aa10.45□□□□□ -0.74
VAPB-201ENST00000265619 SART3Q15020 963 aaKnown RBP10.45□□□□□ -0.74
VAPB-201ENST00000265619 ZFYVE9O95405 1425 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms