RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 PA2G4Q9UQ80 394 aaKnown RBP20.18■□□□□ 0.82
SRF-201ENST00000265354 CCDC85AQ96PX6 553 aaPredicted RBP20.18■□□□□ 0.82
SRF-201ENST00000265354 ZSCAN31Q96LW9 406 aaPredicted RBP20.18■□□□□ 0.82
SRF-201ENST00000265354 PSME1Q06323 249 aa20.17■□□□□ 0.82
SRF-201ENST00000265354 ARGLU1Q9NWB6 273 aaPredicted RBP20.17■□□□□ 0.82
SRF-201ENST00000265354 HSP90AA4PQ58FG1 418 aa20.17■□□□□ 0.82
SRF-201ENST00000265354 ZNF692Q9BU19 519 aaPredicted RBP20.17■□□□□ 0.82
SRF-201ENST00000265354 PPIP5K1Q6PFW1 1433 aa20.17■□□□□ 0.82
SRF-201ENST00000265354 MSH6P52701 1360 aa20.16■□□□□ 0.82
SRF-201ENST00000265354 GNAT3A8MTJ3 354 aa20.16■□□□□ 0.82
SRF-201ENST00000265354 WASLO00401 505 aaPredicted RBP20.16■□□□□ 0.82
SRF-201ENST00000265354 PTPRCP08575 1304 aa20.16■□□□□ 0.82
SRF-201ENST00000265354 EIF4A2Q14240 407 aaKnown RBP20.16■□□□□ 0.82
SRF-201ENST00000265354 ZNF530Q6P9A1 599 aaPredicted RBP20.16■□□□□ 0.82
SRF-201ENST00000265354 NFXL1Q6ZNB6 911 aa20.16■□□□□ 0.82
SRF-201ENST00000265354 CFAP65Q6ZU64 1925 aaKnown RBP20.15■□□□□ 0.82
SRF-201ENST00000265354 UVSSAQ2YD98 709 aa20.15■□□□□ 0.82
SRF-201ENST00000265354 PLEKHF1Q96S99 279 aa20.15■□□□□ 0.82
SRF-201ENST00000265354 SCAND2PQ9GZW5 306 aaPredicted RBP20.15■□□□□ 0.82
SRF-201ENST00000265354 MPRIPQ6WCQ1 1025 aa20.14■□□□□ 0.82
SRF-201ENST00000265354 RALYLQ86SE5 291 aaKnown RBP20.14■□□□□ 0.82
SRF-201ENST00000265354 FAM69CQ0P6D2 419 aa20.14■□□□□ 0.81
SRF-201ENST00000265354 NSD2O96028 1365 aa20.14■□□□□ 0.81
SRF-201ENST00000265354 ZNF526Q8TF50 670 aaPredicted RBP20.14■□□□□ 0.81
SRF-201ENST00000265354 PHAXQ9H814 394 aaKnown RBP20.14■□□□□ 0.81
SRF-201ENST00000265354 ITSN2Q9NZM3 1697 aa20.14■□□□□ 0.81
SRF-201ENST00000265354 URI1O94763 535 aaPredicted RBP20.13■□□□□ 0.81
SRF-201ENST00000265354 CEP57L1Q8IYX8 460 aa20.13■□□□□ 0.81
SRF-201ENST00000265354 TTC5Q8N0Z6 440 aa20.13■□□□□ 0.81
SRF-201ENST00000265354 KIF2CQ99661 725 aa20.13■□□□□ 0.81
SRF-201ENST00000265354 TYRO3Q06418 890 aa20.13■□□□□ 0.81
SRF-201ENST00000265354 ZNF500O60304 480 aaPredicted RBP20.13■□□□□ 0.81
SRF-201ENST00000265354 LRMPQ12912 555 aa20.13■□□□□ 0.81
SRF-201ENST00000265354 FAM200AQ8TCP9 573 aa20.13■□□□□ 0.81
SRF-201ENST00000265354 UBXN4Q92575 508 aa20.13■□□□□ 0.81
SRF-201ENST00000265354 BRD1O95696 1058 aa20.13■□□□□ 0.81
SRF-201ENST00000265354 MYRIPQ8NFW9 859 aa20.13■□□□□ 0.81
SRF-201ENST00000265354 KIF18AQ8NI77 898 aa20.13■□□□□ 0.81
SRF-201ENST00000265354 PIBF1Q8WXW3 757 aa20.13■□□□□ 0.81
SRF-201ENST00000265354 ERCC4Q92889 916 aaPredicted RBP20.13■□□□□ 0.81
SRF-201ENST00000265354 ZSWIM4Q9H7M6 989 aa20.13■□□□□ 0.81
SRF-201ENST00000265354 IRX3P78415 501 aaPredicted RBP20.12■□□□□ 0.81
SRF-201ENST00000265354 MTHFSDQ2M296 383 aaKnown RBP20.12■□□□□ 0.81
SRF-201ENST00000265354 CEP135Q66GS9 1140 aa20.12■□□□□ 0.81
SRF-201ENST00000265354 GPATCH11Q8N954 259 aa20.12■□□□□ 0.81
SRF-201ENST00000265354 BCL2L12Q9HB09 334 aa20.12■□□□□ 0.81
SRF-201ENST00000265354 CFAP45Q9UL16 551 aa20.12■□□□□ 0.81
SRF-201ENST00000265354 ADGRL1O94910 1474 aa20.12■□□□□ 0.81
SRF-201ENST00000265354 BTBD11A6QL63 1104 aa20.12■□□□□ 0.81
SRF-201ENST00000265354 GTF2F1P35269 517 aaKnown RBP eCLIP20.12■□□□□ 0.813e-7■□□□□ 8.8
SRF-201ENST00000265354 FKBP4Q02790 459 aaKnown RBP eCLIP20.12■□□□□ 0.81
SRF-201ENST00000265354 SKILP12757 684 aa20.12■□□□□ 0.81
SRF-201ENST00000265354 ATP8B2P98198 1209 aa20.12■□□□□ 0.81
SRF-201ENST00000265354 TRDNQ13061 729 aa20.12■□□□□ 0.81
SRF-201ENST00000265354 ANKRD1Q15327 319 aa20.12■□□□□ 0.81
SRF-201ENST00000265354 UNC5CLQ8IV45 518 aa20.12■□□□□ 0.81
SRF-201ENST00000265354 NLRP2Q9NX02 1062 aa20.12■□□□□ 0.81
SRF-201ENST00000265354 POLR3DP05423 398 aaPredicted RBP20.11■□□□□ 0.81
SRF-201ENST00000265354 GPS2Q13227 327 aa20.11■□□□□ 0.81
SRF-201ENST00000265354 TRIM29Q14134 588 aa20.11■□□□□ 0.81
SRF-201ENST00000265354 ECHDC1Q9NTX5 307 aa20.11■□□□□ 0.81
SRF-201ENST00000265354 CFAP100Q494V2 611 aa20.11■□□□□ 0.81
SRF-201ENST00000265354 CPLX2Q6PUV4 134 aaKnown RBP20.11■□□□□ 0.81
SRF-201ENST00000265354 DNAAF4Q8WXU2 420 aa20.11■□□□□ 0.81
SRF-201ENST00000265354 RBM8AQ9Y5S9 174 aaKnown RBP20.1■□□□□ 0.81
SRF-201ENST00000265354 CHMP4CQ96CF2 233 aa20.1■□□□□ 0.81
SRF-201ENST00000265354 SH2B1Q9NRF2 756 aaPredicted RBP20.1■□□□□ 0.81
SRF-201ENST00000265354 SFPQP23246 707 aaKnown RBP eCLIP20.1■□□□□ 0.81
SRF-201ENST00000265354 TAF3Q5VWG9 929 aa20.1■□□□□ 0.81
SRF-201ENST00000265354 SHANK2Q9UPX8 1470 aa20.09■□□□□ 0.81
SRF-201ENST00000265354 BRF1Q92994 677 aa20.09■□□□□ 0.81
SRF-201ENST00000265354 ABCC10Q5T3U5 1492 aa20.09■□□□□ 0.81
SRF-201ENST00000265354 FSIP1Q8NA03 581 aa20.09■□□□□ 0.81
SRF-201ENST00000265354 DUOX2Q9NRD8 1548 aa20.08■□□□□ 0.81
SRF-201ENST00000265354 ANAPC15P60006 121 aa20.08■□□□□ 0.81
SRF-201ENST00000265354 ZNF396Q96N95 335 aaPredicted RBP20.08■□□□□ 0.81
SRF-201ENST00000265354 CHST3Q7LGC8 479 aa20.08■□□□□ 0.81
SRF-201ENST00000265354 TMC6Q7Z403 805 aa20.08■□□□□ 0.81
SRF-201ENST00000265354 CCDC82Q8N4S0 544 aa20.08■□□□□ 0.81
SRF-201ENST00000265354 INTS4Q96HW7 963 aaKnown RBP20.08■□□□□ 0.81
SRF-201ENST00000265354 PLCH2O75038 1416 aa20.08■□□□□ 0.8
SRF-201ENST00000265354 ERC1Q8IUD2 1116 aa20.08■□□□□ 0.8
SRF-201ENST00000265354 OLFM4Q6UX06 510 aa20.07■□□□□ 0.8
SRF-201ENST00000265354 IL13P35225 146 aa20.07■□□□□ 0.8
SRF-201ENST00000265354 PIP4K2AP48426 406 aaPredicted RBP20.07■□□□□ 0.8
SRF-201ENST00000265354 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
SRF-201ENST00000265354 HIP1O00291 1037 aa20.07■□□□□ 0.8
SRF-201ENST00000265354 CHPF2Q9P2E5 772 aa20.07■□□□□ 0.8
SRF-201ENST00000265354 PYCARDQ9ULZ3 195 aa20.07■□□□□ 0.8
SRF-201ENST00000265354 ADAMTS12P58397 1594 aa20.07■□□□□ 0.8
SRF-201ENST00000265354 CCAR1Q8IX12 1150 aaKnown RBP20.07■□□□□ 0.8
SRF-201ENST00000265354 SMAP1Q8IYB5 467 aaPredicted RBP20.07■□□□□ 0.8
SRF-201ENST00000265354 RRP12Q5JTH9 1297 aaKnown RBP20.06■□□□□ 0.8
SRF-201ENST00000265354 FANCAO15360 1455 aa20.06■□□□□ 0.8
SRF-201ENST00000265354 OSCARQ8IYS5 282 aa20.06■□□□□ 0.8
SRF-201ENST00000265354 USP16Q9Y5T5 823 aa20.06■□□□□ 0.8
SRF-201ENST00000265354 SNX14Q9Y5W7 946 aa20.06■□□□□ 0.8
SRF-201ENST00000265354 NDUFB9Q9Y6M9 179 aa20.06■□□□□ 0.8
SRF-201ENST00000265354 ERVK-7P63135 1459 aa20.06■□□□□ 0.8
SRF-201ENST00000265354 HAND2P61296 217 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms