RNA–Protein interactions for RNA: ENST00000264720.7

GTF3C2-201, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,882 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-201ENST00000264720 HOXB7P09629 217 aa13.11□□□□□ -0.31
GTF3C2-201ENST00000264720 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
GTF3C2-201ENST00000264720 PHKG2P15735 406 aa13.1□□□□□ -0.31
GTF3C2-201ENST00000264720 ABCC4O15439 1325 aa13.1□□□□□ -0.31
GTF3C2-201ENST00000264720 MEGF6O75095 1541 aa13.1□□□□□ -0.31
GTF3C2-201ENST00000264720 PTMAP06454 111 aaKnown RBP13.1□□□□□ -0.31
GTF3C2-201ENST00000264720 NASPP49321 788 aaPredicted RBP13.1□□□□□ -0.31
GTF3C2-201ENST00000264720 TAF7LQ5H9L4 462 aa13.1□□□□□ -0.31
GTF3C2-201ENST00000264720 MAP7D2Q96T17 732 aa13.1□□□□□ -0.31
GTF3C2-201ENST00000264720 CACNA1FO60840 1977 aa13.1□□□□□ -0.31
GTF3C2-201ENST00000264720 DCAF5Q96JK2 942 aa13.09□□□□□ -0.31
GTF3C2-201ENST00000264720 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
GTF3C2-201ENST00000264720 FSD2A1L4K1 749 aa13.09□□□□□ -0.31
GTF3C2-201ENST00000264720 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
GTF3C2-201ENST00000264720 IL2RBP14784 551 aa13.09□□□□□ -0.31
GTF3C2-201ENST00000264720 EIF4A1P60842 406 aaKnown RBP13.09□□□□□ -0.31
GTF3C2-201ENST00000264720 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
GTF3C2-201ENST00000264720 SMAP1Q8IYB5 467 aaPredicted RBP13.09□□□□□ -0.31
GTF3C2-201ENST00000264720 PARP4Q9UKK3 1724 aaKnown RBP13.08□□□□□ -0.31
GTF3C2-201ENST00000264720 ZSCAN30Q86W11 494 aa13.08□□□□□ -0.32
GTF3C2-201ENST00000264720 GAS2L3Q86XJ1 694 aa13.08□□□□□ -0.32
GTF3C2-201ENST00000264720 ZCRB1Q8TBF4 217 aaKnown RBP13.08□□□□□ -0.32
GTF3C2-201ENST00000264720 JARID2Q92833 1246 aaPredicted RBP13.08□□□□□ -0.32
GTF3C2-201ENST00000264720 PCDH11XQ9BZA7 1347 aa13.08□□□□□ -0.32
GTF3C2-201ENST00000264720 PCDH11YQ9BZA8 1340 aa13.08□□□□□ -0.32
GTF3C2-201ENST00000264720 PIP4K2BP78356 416 aa13.08□□□□□ -0.32
GTF3C2-201ENST00000264720 ZBTB40Q9NUA8 1239 aa13.08□□□□□ -0.32
GTF3C2-201ENST00000264720 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
GTF3C2-201ENST00000264720 PHLPP1O60346 1717 aa13.07□□□□□ -0.32
GTF3C2-201ENST00000264720 KDM3BQ7LBC6 1761 aa13.07□□□□□ -0.32
GTF3C2-201ENST00000264720 ZNF771Q7L3S4 317 aaPredicted RBP13.07□□□□□ -0.32
GTF3C2-201ENST00000264720 BTG4Q9NY30 223 aa13.07□□□□□ -0.32
GTF3C2-201ENST00000264720 COL22A1Q8NFW1 1626 aaPredicted RBP13.07□□□□□ -0.32
GTF3C2-201ENST00000264720 COL14A1Q05707 1796 aaKnown RBP13.07□□□□□ -0.32
GTF3C2-201ENST00000264720 PKD1L3Q7Z443 1732 aa13.07□□□□□ -0.32
GTF3C2-201ENST00000264720 LARP1Q6PKG0 1096 aaKnown RBP13.07□□□□□ -0.32
GTF3C2-201ENST00000264720 SLC52A2Q9HAB3 445 aa13.07□□□□□ -0.32
GTF3C2-201ENST00000264720 CHMP5Q9NZZ3 219 aa13.07□□□□□ -0.32
GTF3C2-201ENST00000264720 IGHDP01880 384 aa13.06□□□□□ -0.32
GTF3C2-201ENST00000264720 INTS3Q68E01 1043 aaKnown RBP13.06□□□□□ -0.32
GTF3C2-201ENST00000264720 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
GTF3C2-201ENST00000264720 SCN11AQ9UI33 1791 aa13.06□□□□□ -0.32
GTF3C2-201ENST00000264720 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
GTF3C2-201ENST00000264720 CERS3Q8IU89 383 aa13.06□□□□□ -0.32
GTF3C2-201ENST00000264720 HSCBQ8IWL3 235 aa13.06□□□□□ -0.32
GTF3C2-201ENST00000264720 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
GTF3C2-201ENST00000264720 CCT4P50991 539 aaKnown RBP13.05□□□□□ -0.32
GTF3C2-201ENST00000264720 NECTIN2Q92692 538 aa13.05□□□□□ -0.32
GTF3C2-201ENST00000264720 ZBTB7BO15156 539 aaPredicted RBP13.05□□□□□ -0.32
GTF3C2-201ENST00000264720 CYP27B1O15528 508 aa13.05□□□□□ -0.32
GTF3C2-201ENST00000264720 OFD1O75665 1012 aa13.05□□□□□ -0.32
GTF3C2-201ENST00000264720 CABP4P57796 275 aa13.05□□□□□ -0.32
GTF3C2-201ENST00000264720 FKBP5Q13451 457 aaPredicted RBP13.05□□□□□ -0.32
GTF3C2-201ENST00000264720 HDAC1Q13547 482 aaPredicted RBP13.05□□□□□ -0.32
GTF3C2-201ENST00000264720 TTC5Q8N0Z6 440 aa13.05□□□□□ -0.32
GTF3C2-201ENST00000264720 FLIIQ13045 1269 aa13.05□□□□□ -0.32
GTF3C2-201ENST00000264720 DDX11L8A8MPP1 907 aa13.04□□□□□ -0.32
GTF3C2-201ENST00000264720 KDM6AO15550 1401 aaPredicted RBP13.04□□□□□ -0.32
GTF3C2-201ENST00000264720 KCNQ3O43525 872 aa13.03□□□□□ -0.32
GTF3C2-201ENST00000264720 SLC4A10Q6U841 1118 aa13.03□□□□□ -0.32
GTF3C2-201ENST00000264720 SIPA1L3O60292 1781 aaPredicted RBP13.03□□□□□ -0.32
GTF3C2-201ENST00000264720 NFATC2IPQ8NCF5 419 aa13.03□□□□□ -0.32
GTF3C2-201ENST00000264720 ZNF830Q96NB3 372 aaPredicted RBP13.03□□□□□ -0.32
GTF3C2-201ENST00000264720 ZNF790Q6PG37 636 aa13.03□□□□□ -0.32
GTF3C2-201ENST00000264720 G2E3Q7L622 706 aa13.03□□□□□ -0.32
GTF3C2-201ENST00000264720 DDX49Q9Y6V7 483 aaKnown RBP13.03□□□□□ -0.32
GTF3C2-201ENST00000264720 COL16A1Q07092 1604 aaPredicted RBP13.02□□□□□ -0.32
GTF3C2-201ENST00000264720 DBF4Q9UBU7 674 aaPredicted RBP13.02□□□□□ -0.32
GTF3C2-201ENST00000264720 TRERF1Q96PN7 1200 aa13.02□□□□□ -0.33
GTF3C2-201ENST00000264720 ERVV-2B6SEH9 535 aa13.02□□□□□ -0.33
GTF3C2-201ENST00000264720 GIGYF1O75420 1035 aaPredicted RBP13.02□□□□□ -0.33
GTF3C2-201ENST00000264720 DDX54Q8TDD1 881 aaKnown RBP13.01□□□□□ -0.33
GTF3C2-201ENST00000264720 ADAMTS2O95450 1211 aa13.01□□□□□ -0.33
GTF3C2-201ENST00000264720 CCDC173Q0VFZ6 552 aa13.01□□□□□ -0.33
GTF3C2-201ENST00000264720 RGS12O14924 1447 aa13.01□□□□□ -0.33
GTF3C2-201ENST00000264720 MRC1P22897 1456 aa13□□□□□ -0.33
GTF3C2-201ENST00000264720 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
GTF3C2-201ENST00000264720 NUTM2BA6NNL0 878 aaPredicted RBP13□□□□□ -0.33
GTF3C2-201ENST00000264720 NUTM2EB1AL46 878 aaPredicted RBP13□□□□□ -0.33
GTF3C2-201ENST00000264720 DMTNQ08495 405 aa13□□□□□ -0.33
GTF3C2-201ENST00000264720 NUTM2AQ8IVF1 878 aaPredicted RBP13□□□□□ -0.33
GTF3C2-201ENST00000264720 IPO4Q8TEX9 1081 aaKnown RBP13□□□□□ -0.33
GTF3C2-201ENST00000264720 CHPF2Q9P2E5 772 aa13□□□□□ -0.33
GTF3C2-201ENST00000264720 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
GTF3C2-201ENST00000264720 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
GTF3C2-201ENST00000264720 F6X3S4 739 aa12.99□□□□□ -0.33
GTF3C2-201ENST00000264720 SLC39A6Q13433 755 aa12.99□□□□□ -0.33
GTF3C2-201ENST00000264720 RNF214Q8ND24 703 aa12.99□□□□□ -0.33
GTF3C2-201ENST00000264720 GBP4Q96PP9 640 aa12.99□□□□□ -0.33
GTF3C2-201ENST00000264720 CDCA7Q9BWT1 371 aaPredicted RBP12.99□□□□□ -0.33
GTF3C2-201ENST00000264720 HYPKQ9NX55 129 aa12.99□□□□□ -0.33
GTF3C2-201ENST00000264720 ANTXR1Q9H6X2 564 aa12.99□□□□□ -0.33
GTF3C2-201ENST00000264720 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
GTF3C2-201ENST00000264720 GNAI3P08754 354 aa12.99□□□□□ -0.33
GTF3C2-201ENST00000264720 SNRPA1P09661 255 aaKnown RBP12.99□□□□□ -0.33
GTF3C2-201ENST00000264720 GCC1Q96CN9 775 aa12.99□□□□□ -0.33
GTF3C2-201ENST00000264720 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
GTF3C2-201ENST00000264720 RPAP2Q8IXW5 612 aaPredicted RBP12.98□□□□□ -0.33
GTF3C2-201ENST00000264720 GOLGA6L22H0YM25 854 aa12.98□□□□□ -0.33
GTF3C2-201ENST00000264720 DDX58O95786 925 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms