RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 RASEFQ8IZ41 740 aa14.93□□□□□ -0.02
CHMP3-201ENST00000263856 DIAPH3Q9NSV4 1193 aa14.93□□□□□ -0.02
CHMP3-201ENST00000263856 PRDM10Q9NQV6 1147 aa14.92□□□□□ -0.02
CHMP3-201ENST00000263856 NBPF7P0C2Y1 421 aaPredicted RBP14.92□□□□□ -0.02
CHMP3-201ENST00000263856 FERMT3Q86UX7 667 aa14.92□□□□□ -0.02
CHMP3-201ENST00000263856 RHPN1Q8TCX5 695 aa14.92□□□□□ -0.02
CHMP3-201ENST00000263856 BCL11BQ9C0K0 894 aaPredicted RBP14.92□□□□□ -0.02
CHMP3-201ENST00000263856 DLC1Q96QB1 1528 aa14.92□□□□□ -0.02
CHMP3-201ENST00000263856 SETD1BQ9UPS6 1966 aaKnown RBP14.92□□□□□ -0.02
CHMP3-201ENST00000263856 ADCY5O95622 1261 aa14.91□□□□□ -0.02
CHMP3-201ENST00000263856 CEBPAP49715 358 aaPredicted RBP14.91□□□□□ -0.02
CHMP3-201ENST00000263856 RIMBP3CA6NJZ7 1639 aa14.91□□□□□ -0.02
CHMP3-201ENST00000263856 RIMBP3BA6NNM3 1639 aa14.91□□□□□ -0.02
CHMP3-201ENST00000263856 RIMBP3Q9UFD9 1639 aa14.91□□□□□ -0.02
CHMP3-201ENST00000263856 TAF7Q15545 349 aaPredicted RBP14.91□□□□□ -0.02
CHMP3-201ENST00000263856 TCEANC2Q96MN5 208 aa14.91□□□□□ -0.02
CHMP3-201ENST00000263856 SNX14Q9Y5W7 946 aa14.91□□□□□ -0.02
CHMP3-201ENST00000263856 ANAPC15P60006 121 aa14.91□□□□□ -0.02
CHMP3-201ENST00000263856 PRPF40BQ6NWY9 871 aaKnown RBP14.91□□□□□ -0.02
CHMP3-201ENST00000263856 CNTROBQ8N137 903 aa14.91□□□□□ -0.02
CHMP3-201ENST00000263856 INTS4Q96HW7 963 aaKnown RBP14.91□□□□□ -0.02
CHMP3-201ENST00000263856 JAKMIP1Q96N16 626 aaKnown RBP14.91□□□□□ -0.02
CHMP3-201ENST00000263856 ITSN1Q15811 1721 aa14.91□□□□□ -0.02
CHMP3-201ENST00000263856 STX6O43752 255 aa14.9□□□□□ -0.02
CHMP3-201ENST00000263856 LARGE1O95461 756 aa14.9□□□□□ -0.02
CHMP3-201ENST00000263856 SYT1P21579 422 aa14.9□□□□□ -0.02
CHMP3-201ENST00000263856 NECAB1Q8N987 351 aa14.9□□□□□ -0.02
CHMP3-201ENST00000263856 IL17REQ8NFR9 667 aa14.9□□□□□ -0.02
CHMP3-201ENST00000263856 RBM33Q96EV2 1170 aaKnown RBP14.9□□□□□ -0.02
CHMP3-201ENST00000263856 SOS1Q07889 1333 aaPredicted RBP14.9□□□□□ -0.02
CHMP3-201ENST00000263856 SALL3Q9BXA9 1300 aa14.9□□□□□ -0.02
CHMP3-201ENST00000263856 PI4KAP2A4QPH2 592 aa14.89□□□□□ -0.03
CHMP3-201ENST00000263856 HSPA4P34932 840 aa14.89□□□□□ -0.03
CHMP3-201ENST00000263856 DNM1Q05193 864 aaKnown RBP14.89□□□□□ -0.03
CHMP3-201ENST00000263856 SASS6Q6UVJ0 657 aa14.89□□□□□ -0.03
CHMP3-201ENST00000263856 PI4KAP1Q8N8J0 262 aa14.89□□□□□ -0.03
CHMP3-201ENST00000263856 CCDC183Q5T5S1 534 aa14.89□□□□□ -0.03
CHMP3-201ENST00000263856 CHPF2Q9P2E5 772 aa14.89□□□□□ -0.03
CHMP3-201ENST00000263856 FLT4P35916 1363 aa14.89□□□□□ -0.03
CHMP3-201ENST00000263856 ZSCAN22P10073 491 aaPredicted RBP14.89□□□□□ -0.03
CHMP3-201ENST00000263856 FAM173BQ6P4H8 233 aa14.89□□□□□ -0.03
CHMP3-201ENST00000263856 ABTB2Q8N961 1025 aa14.89□□□□□ -0.03
CHMP3-201ENST00000263856 PA2G4Q9UQ80 394 aaKnown RBP14.89□□□□□ -0.03
CHMP3-201ENST00000263856 USP6P35125 1406 aa14.89□□□□□ -0.03
CHMP3-201ENST00000263856 GJB2P29033 226 aa14.88□□□□□ -0.03
CHMP3-201ENST00000263856 LTKP29376 864 aa14.88□□□□□ -0.03
CHMP3-201ENST00000263856 CAMK4Q16566 473 aa14.88□□□□□ -0.03
CHMP3-201ENST00000263856 RUFY3Q7L099 469 aa14.88□□□□□ -0.03
CHMP3-201ENST00000263856 LIMCH1Q9UPQ0 1083 aa14.87□□□□□ -0.03
CHMP3-201ENST00000263856 AMOTL2Q9Y2J4 779 aa14.87□□□□□ -0.03
CHMP3-201ENST00000263856 SGSM2O43147 1006 aa14.87□□□□□ -0.03
CHMP3-201ENST00000263856 KCNQ3O43525 872 aa14.87□□□□□ -0.03
CHMP3-201ENST00000263856 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.87□□□□□ -0.03
CHMP3-201ENST00000263856 STK3Q13188 491 aa14.87□□□□□ -0.03
CHMP3-201ENST00000263856 ADCK5Q3MIX3 580 aa14.87□□□□□ -0.03
CHMP3-201ENST00000263856 KIF1BPQ96EK5 621 aa14.87□□□□□ -0.03
CHMP3-201ENST00000263856 C9orf78Q9NZ63 289 aaPredicted RBP14.87□□□□□ -0.03
CHMP3-201ENST00000263856 RAD50Q92878 1312 aa14.87□□□□□ -0.03
CHMP3-201ENST00000263856 MON2Q7Z3U7 1717 aa14.86□□□□□ -0.03
CHMP3-201ENST00000263856 OVOS2A0A0J9YW53 1432 aa14.86□□□□□ -0.03
CHMP3-201ENST00000263856 OVOS2Q6IE36 1432 aa14.86□□□□□ -0.03
CHMP3-201ENST00000263856 CEP170BQ9Y4F5 1589 aaPredicted RBP14.86□□□□□ -0.03
CHMP3-201ENST00000263856 F13A1P00488 732 aa14.86□□□□□ -0.03
CHMP3-201ENST00000263856 PTH1RQ03431 593 aa14.86□□□□□ -0.03
CHMP3-201ENST00000263856 SIL1Q9H173 461 aa14.86□□□□□ -0.03
CHMP3-201ENST00000263856 CCDC9Q9Y3X0 531 aaKnown RBP14.86□□□□□ -0.03
CHMP3-201ENST00000263856 RPAP1Q9BWH6 1393 aaPredicted RBP14.86□□□□□ -0.03
CHMP3-201ENST00000263856 C3P01024 1663 aa14.86□□□□□ -0.03
CHMP3-201ENST00000263856 PEAK1Q9H792 1746 aa14.86□□□□□ -0.03
CHMP3-201ENST00000263856 AIMP1Q12904 312 aaKnown RBP14.86□□□□□ -0.03
CHMP3-201ENST00000263856 LMOD2Q6P5Q4 547 aa14.86□□□□□ -0.03
CHMP3-201ENST00000263856 PDRG1Q9NUG6 133 aa14.86□□□□□ -0.03
CHMP3-201ENST00000263856 STAP2Q9UGK3 403 aa14.86□□□□□ -0.03
CHMP3-201ENST00000263856 ARHGEF10O15013 1369 aa14.86□□□□□ -0.03
CHMP3-201ENST00000263856 IFIT2P09913 472 aaKnown RBP14.85□□□□□ -0.03
CHMP3-201ENST00000263856 PI4K2BQ8TCG2 481 aa14.85□□□□□ -0.03
CHMP3-201ENST00000263856 LGR6Q9HBX8 967 aa14.85□□□□□ -0.03
CHMP3-201ENST00000263856 PLEKHG3A1L390 1219 aa14.85□□□□□ -0.03
CHMP3-201ENST00000263856 MCM5P33992 734 aa14.85□□□□□ -0.03
CHMP3-201ENST00000263856 FOSBP53539 338 aa14.85□□□□□ -0.03
CHMP3-201ENST00000263856 SBNO1A3KN83 1393 aa14.85□□□□□ -0.03
CHMP3-201ENST00000263856 NOLC1Q14978 699 aaKnown RBP eCLIP14.85□□□□□ -0.03
CHMP3-201ENST00000263856 CLASRPQ8N2M8 674 aaKnown RBP14.85□□□□□ -0.03
CHMP3-201ENST00000263856 SSH3Q8TE77 659 aa14.85□□□□□ -0.03
CHMP3-201ENST00000263856 UBE2HP62256 183 aa14.84□□□□□ -0.03
CHMP3-201ENST00000263856 TEFQ10587 303 aa14.84□□□□□ -0.03
CHMP3-201ENST00000263856 DRC7Q8IY82 874 aa14.84□□□□□ -0.03
CHMP3-201ENST00000263856 LSG1Q9H089 658 aaKnown RBP14.84□□□□□ -0.03
CHMP3-201ENST00000263856 HOXC9P31274 260 aa14.84□□□□□ -0.03
CHMP3-201ENST00000263856 MPRIPQ6WCQ1 1025 aa14.84□□□□□ -0.03
CHMP3-201ENST00000263856 DNAAF4Q8WXU2 420 aa14.84□□□□□ -0.03
CHMP3-201ENST00000263856 CCDC8Q9H0W5 538 aaPredicted RBP14.84□□□□□ -0.03
CHMP3-201ENST00000263856 IGSF1Q8N6C5 1336 aa14.83□□□□□ -0.03
CHMP3-201ENST00000263856 GOLGA6L4A6NEF3 574 aa14.83□□□□□ -0.03
CHMP3-201ENST00000263856 DYNC1I1O14576 645 aa14.83□□□□□ -0.03
CHMP3-201ENST00000263856 AACSQ86V21 672 aa14.83□□□□□ -0.03
CHMP3-201ENST00000263856 CKAP2LQ8IYA6 745 aa14.83□□□□□ -0.03
CHMP3-201ENST00000263856 TNRQ92752 1358 aa14.83□□□□□ -0.04
CHMP3-201ENST00000263856 TFIP11Q9UBB9 837 aaKnown RBP14.83□□□□□ -0.04
CHMP3-201ENST00000263856 ATP6V1DQ9Y5K8 247 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms