RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 SGSM2O43147 1006 aa14.79□□□□□ -0.04
CHMP2B-201ENST00000263780 AK2P54819 239 aa14.79□□□□□ -0.04
CHMP2B-201ENST00000263780 CGNQ9P2M7 1197 aaKnown RBP14.79□□□□□ -0.04
CHMP2B-201ENST00000263780 TSPYL4Q9UJ04 414 aa14.79□□□□□ -0.04
CHMP2B-201ENST00000263780 GABPB1Q06547 395 aaPredicted RBP14.78□□□□□ -0.04
CHMP2B-201ENST00000263780 WAPLQ7Z5K2 1190 aa14.78□□□□□ -0.04
CHMP2B-201ENST00000263780 SPDYE4A6NLX3 237 aa14.78□□□□□ -0.04
CHMP2B-201ENST00000263780 MAP3K11Q16584 847 aa14.78□□□□□ -0.04
CHMP2B-201ENST00000263780 CCDC30Q5VVM6 783 aa14.78□□□□□ -0.04
CHMP2B-201ENST00000263780 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.78□□□□□ -0.04
CHMP2B-201ENST00000263780 CNTROBQ8N137 903 aa14.78□□□□□ -0.04
CHMP2B-201ENST00000263780 SPC24Q8NBT2 197 aa14.78□□□□□ -0.04
CHMP2B-201ENST00000263780 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
CHMP2B-201ENST00000263780 CCDC61Q9Y6R9 512 aa14.78□□□□□ -0.04
CHMP2B-201ENST00000263780 SOS1Q07889 1333 aaPredicted RBP14.78□□□□□ -0.04
CHMP2B-201ENST00000263780 TUBGCP6Q96RT7 1819 aa14.77□□□□□ -0.04
CHMP2B-201ENST00000263780 RUFY3Q7L099 469 aa14.77□□□□□ -0.04
CHMP2B-201ENST00000263780 G2E3Q7L622 706 aa14.77□□□□□ -0.04
CHMP2B-201ENST00000263780 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.05
CHMP2B-201ENST00000263780 PNMA6EA0A0J9YXQ4 647 aa14.77□□□□□ -0.05
CHMP2B-201ENST00000263780 FAM177BA6PVY3 158 aa14.77□□□□□ -0.05
CHMP2B-201ENST00000263780 U2AF2P26368 475 aaKnown RBP eCLIP14.77□□□□□ -0.05
CHMP2B-201ENST00000263780 UNC5CLQ8IV45 518 aa14.77□□□□□ -0.05
CHMP2B-201ENST00000263780 VPS53Q5VIR6 699 aa14.76□□□□□ -0.05
CHMP2B-201ENST00000263780 RUFY2Q8WXA3 655 aa14.76□□□□□ -0.05
CHMP2B-201ENST00000263780 NUDT16Q96DE0 195 aaKnown RBP14.76□□□□□ -0.05
CHMP2B-201ENST00000263780 MTMR6Q9Y217 621 aa14.76□□□□□ -0.05
CHMP2B-201ENST00000263780 LSG1Q9H089 658 aaKnown RBP14.76□□□□□ -0.05
CHMP2B-201ENST00000263780 NUP62CLQ9H1M0 184 aa14.76□□□□□ -0.05
CHMP2B-201ENST00000263780 ELP1O95163 1332 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 TTC21BQ7Z4L5 1316 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 AP5Z1O43299 807 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 GJB2P29033 226 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 KRT85P78386 507 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 DNM1Q05193 864 aaKnown RBP14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 FLIIQ13045 1269 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 TM6SF1Q9BZW5 370 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 NEO1Q92859 1461 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 PREX1Q8TCU6 1659 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 MYO5BQ9ULV0 1848 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 CCDC171Q6TFL3 1326 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 PDCP20941 246 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 DRC7Q8IY82 874 aa14.75□□□□□ -0.05
CHMP2B-201ENST00000263780 CAVIN2O95810 425 aa14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 UBTFL1P0CB47 393 aaPredicted RBP14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 PTGS1P23219 599 aa14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 TPRNQ4KMQ1 711 aa14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 SSH3Q8TE77 659 aa14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 TYRO3Q06418 890 aa14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 NCBP1Q09161 790 aaKnown RBP14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 HSP90AB4PQ58FF6 505 aa14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 ZNF771Q7L3S4 317 aaPredicted RBP14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 CCDC112Q8NEF3 446 aa14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 PDRG1Q9NUG6 133 aa14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 HYPKQ9NX55 129 aa14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 LRRFIP2Q9Y608 721 aaKnown RBP14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 CYP46A1Q9Y6A2 500 aa14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 TCHHQ07283 1943 aa14.74□□□□□ -0.05
CHMP2B-201ENST00000263780 DIP2CQ9Y2E4 1556 aa14.73□□□□□ -0.05
CHMP2B-201ENST00000263780 KIF1BPQ96EK5 621 aa14.73□□□□□ -0.05
CHMP2B-201ENST00000263780 DDX19AQ9NUU7 478 aaKnown RBP14.73□□□□□ -0.05
CHMP2B-201ENST00000263780 HTATSF1O43719 755 aaKnown RBP14.73□□□□□ -0.05
CHMP2B-201ENST00000263780 TNNT1P13805 278 aa14.73□□□□□ -0.05
CHMP2B-201ENST00000263780 CASTP20810 708 aaKnown RBP14.73□□□□□ -0.05
CHMP2B-201ENST00000263780 SIRT1Q96EB6 747 aa14.73□□□□□ -0.05
CHMP2B-201ENST00000263780 CTNNA3Q9UI47 895 aa14.73□□□□□ -0.05
CHMP2B-201ENST00000263780 CPS1P31327 1500 aa14.72□□□□□ -0.05
CHMP2B-201ENST00000263780 GOLGA6L4A6NEF3 574 aa14.72□□□□□ -0.05
CHMP2B-201ENST00000263780 NEMFO60524 1076 aa14.72□□□□□ -0.05
CHMP2B-201ENST00000263780 CCDC186Q7Z3E2 898 aa14.72□□□□□ -0.05
CHMP2B-201ENST00000263780 CCDC83Q8IWF9 413 aa14.72□□□□□ -0.05
CHMP2B-201ENST00000263780 SCAND2PQ9GZW5 306 aaPredicted RBP14.72□□□□□ -0.05
CHMP2B-201ENST00000263780 PI4K2BQ8TCG2 481 aa14.72□□□□□ -0.05
CHMP2B-201ENST00000263780 TNMDQ9H2S6 317 aa14.72□□□□□ -0.05
CHMP2B-201ENST00000263780 MRVI1Q9Y6F6 885 aa14.72□□□□□ -0.05
CHMP2B-201ENST00000263780 PXDNLA1KZ92 1463 aa14.71□□□□□ -0.05
CHMP2B-201ENST00000263780 VPS37CA5D8V6 355 aaPredicted RBP14.71□□□□□ -0.05
CHMP2B-201ENST00000263780 NUTM1Q86Y26 1132 aa14.71□□□□□ -0.05
CHMP2B-201ENST00000263780 RASEFQ8IZ41 740 aa14.71□□□□□ -0.05
CHMP2B-201ENST00000263780 TRIM5Q9C035 493 aa14.71□□□□□ -0.05
CHMP2B-201ENST00000263780 IL25Q9H293 177 aa14.71□□□□□ -0.05
CHMP2B-201ENST00000263780 IL1RAPL2Q9NP60 686 aa14.71□□□□□ -0.05
CHMP2B-201ENST00000263780 DDX41Q9UJV9 622 aaKnown RBP14.71□□□□□ -0.05
CHMP2B-201ENST00000263780 MON2Q7Z3U7 1717 aa14.71□□□□□ -0.05
CHMP2B-201ENST00000263780 SURF6O75683 361 aaKnown RBP14.71□□□□□ -0.06
CHMP2B-201ENST00000263780 RAPGEF3O95398 923 aa14.71□□□□□ -0.06
CHMP2B-201ENST00000263780 ZNF75DP51815 510 aa14.71□□□□□ -0.06
CHMP2B-201ENST00000263780 FAM193AP78312 1265 aa14.71□□□□□ -0.06
CHMP2B-201ENST00000263780 RHPN1Q8TCX5 695 aa14.71□□□□□ -0.06
CHMP2B-201ENST00000263780 ZSWIM6Q9HCJ5 1215 aa14.71□□□□□ -0.06
CHMP2B-201ENST00000263780 MIS18AQ9NYP9 233 aa14.71□□□□□ -0.06
CHMP2B-201ENST00000263780 PPP6R1Q9UPN7 881 aa14.71□□□□□ -0.06
CHMP2B-201ENST00000263780 MORC2Q9Y6X9 1032 aaPredicted RBP14.71□□□□□ -0.06
CHMP2B-201ENST00000263780 ZKSCAN1P17029 563 aaPredicted RBP14.7□□□□□ -0.06
CHMP2B-201ENST00000263780 CDC25BP30305 580 aa14.7□□□□□ -0.06
CHMP2B-201ENST00000263780 LARP1BQ659C4 914 aaKnown RBP14.7□□□□□ -0.06
CHMP2B-201ENST00000263780 ZSCAN25Q6NSZ9 544 aa14.7□□□□□ -0.06
CHMP2B-201ENST00000263780 PLA2G4DQ86XP0 818 aa14.7□□□□□ -0.06
CHMP2B-201ENST00000263780 TDRD7Q8NHU6 1098 aaKnown RBP14.7□□□□□ -0.06
CHMP2B-201ENST00000263780 KCNB2Q92953 911 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms