RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 NFIXQ14938 502 aa12.16□□□□□ -0.46
LCN1-201ENST00000263598 VSIG10Q8N0Z9 540 aa12.16□□□□□ -0.46
LCN1-201ENST00000263598 SMC1BQ8NDV3 1235 aa12.16□□□□□ -0.46
LCN1-201ENST00000263598 WDR90Q96KV7 1748 aa12.16□□□□□ -0.46
LCN1-201ENST00000263598 COL15A1P39059 1388 aa12.16□□□□□ -0.46
LCN1-201ENST00000263598 SCN11AQ9UI33 1791 aa12.15□□□□□ -0.46
LCN1-201ENST00000263598 LMNB1P20700 586 aa12.15□□□□□ -0.46
LCN1-201ENST00000263598 HTRA3P83110 453 aa12.15□□□□□ -0.46
LCN1-201ENST00000263598 SLC39A6Q13433 755 aa12.15□□□□□ -0.46
LCN1-201ENST00000263598 JMYQ8N9B5 988 aa12.15□□□□□ -0.46
LCN1-201ENST00000263598 TNRC6CQ9HCJ0 1690 aaKnown RBP12.14□□□□□ -0.47
LCN1-201ENST00000263598 ADAMTS7Q9UKP4 1686 aa12.14□□□□□ -0.47
LCN1-201ENST00000263598 SERPINB2P05120 415 aa12.14□□□□□ -0.47
LCN1-201ENST00000263598 HMOX1P09601 288 aa12.14□□□□□ -0.47
LCN1-201ENST00000263598 RASSF7Q02833 373 aa12.14□□□□□ -0.47
LCN1-201ENST00000263598 TTLL6Q8N841 843 aa12.14□□□□□ -0.47
LCN1-201ENST00000263598 ZBTB1Q9Y2K1 713 aa12.14□□□□□ -0.47
LCN1-201ENST00000263598 MRC1P22897 1456 aa12.14□□□□□ -0.47
LCN1-201ENST00000263598 GLTPD2A6NH11 291 aa12.13□□□□□ -0.47
LCN1-201ENST00000263598 H0YIN7 160 aa12.13□□□□□ -0.47
LCN1-201ENST00000263598 STARD3NLO95772 234 aa12.13□□□□□ -0.47
LCN1-201ENST00000263598 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
LCN1-201ENST00000263598 CANXP27824 592 aaKnown RBP12.13□□□□□ -0.47
LCN1-201ENST00000263598 MTHFSDQ2M296 383 aaKnown RBP12.13□□□□□ -0.47
LCN1-201ENST00000263598 AMER1Q5JTC6 1135 aaPredicted RBP12.13□□□□□ -0.47
LCN1-201ENST00000263598 C2CD5Q86YS7 1000 aa12.13□□□□□ -0.47
LCN1-201ENST00000263598 TTC5Q8N0Z6 440 aa12.13□□□□□ -0.47
LCN1-201ENST00000263598 A0A087WZG4 1122 aa12.12□□□□□ -0.47
LCN1-201ENST00000263598 DIAPH1O60610 1272 aaKnown RBP12.12□□□□□ -0.47
LCN1-201ENST00000263598 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
LCN1-201ENST00000263598 PDZRN3Q9UPQ7 1066 aa12.11□□□□□ -0.47
LCN1-201ENST00000263598 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
LCN1-201ENST00000263598 EIF5P55010 431 aaKnown RBP12.1□□□□□ -0.47
LCN1-201ENST00000263598 DPY19L2Q6NUT2 758 aa12.1□□□□□ -0.47
LCN1-201ENST00000263598 BICDL1Q6ZP65 573 aa12.1□□□□□ -0.47
LCN1-201ENST00000263598 TEX13AQ9BXU3 409 aaPredicted RBP12.1□□□□□ -0.47
LCN1-201ENST00000263598 SBF1O95248 1867 aa12.1□□□□□ -0.47
LCN1-201ENST00000263598 PDE6BP35913 854 aa12.09□□□□□ -0.47
LCN1-201ENST00000263598 TEFQ10587 303 aa12.09□□□□□ -0.47
LCN1-201ENST00000263598 COL13A1Q5TAT6 717 aaPredicted RBP12.09□□□□□ -0.47
LCN1-201ENST00000263598 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
LCN1-201ENST00000263598 ZNF622Q969S3 477 aaKnown RBP eCLIP12.09□□□□□ -0.47
LCN1-201ENST00000263598 AFDNP55196 1824 aaKnown RBP12.09□□□□□ -0.47
LCN1-201ENST00000263598 CARMIL3Q8ND23 1372 aa12.08□□□□□ -0.48
LCN1-201ENST00000263598 NFKBIEO00221 500 aa12.08□□□□□ -0.48
LCN1-201ENST00000263598 NPHP1O15259 732 aa12.08□□□□□ -0.48
LCN1-201ENST00000263598 PRELPP51888 382 aa12.08□□□□□ -0.48
LCN1-201ENST00000263598 CC2D1BQ5T0F9 858 aaKnown RBP12.08□□□□□ -0.48
LCN1-201ENST00000263598 TBC1D9BQ66K14 1250 aa12.08□□□□□ -0.48
LCN1-201ENST00000263598 ZNF790Q6PG37 636 aa12.08□□□□□ -0.48
LCN1-201ENST00000263598 CCER1Q8TC90 406 aaPredicted RBP12.08□□□□□ -0.48
LCN1-201ENST00000263598 BRIP1Q9BX63 1249 aa12.08□□□□□ -0.48
LCN1-201ENST00000263598 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
LCN1-201ENST00000263598 DLEC1Q9Y238 1755 aa12.07□□□□□ -0.48
LCN1-201ENST00000263598 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
LCN1-201ENST00000263598 GNAT3A8MTJ3 354 aa12.07□□□□□ -0.48
LCN1-201ENST00000263598 C21orf2O43822 256 aa12.07□□□□□ -0.48
LCN1-201ENST00000263598 ERFEQ4G0M1 354 aa12.07□□□□□ -0.48
LCN1-201ENST00000263598 TNS4Q8IZW8 715 aa12.07□□□□□ -0.48
LCN1-201ENST00000263598 GAS2L2Q8NHY3 880 aa12.07□□□□□ -0.48
LCN1-201ENST00000263598 ZNF496Q96IT1 587 aaPredicted RBP12.07□□□□□ -0.48
LCN1-201ENST00000263598 KIF7Q2M1P5 1343 aa12.07□□□□□ -0.48
LCN1-201ENST00000263598 UBR2Q8IWV8 1755 aa12.06□□□□□ -0.48
LCN1-201ENST00000263598 U2SURPO15042 1029 aaKnown RBP12.06□□□□□ -0.48
LCN1-201ENST00000263598 IL6STP40189 918 aaPredicted RBP12.06□□□□□ -0.48
LCN1-201ENST00000263598 FMNL2Q96PY5 1086 aa12.06□□□□□ -0.48
LCN1-201ENST00000263598 SETDB2Q96T68 719 aa12.06□□□□□ -0.48
LCN1-201ENST00000263598 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
LCN1-201ENST00000263598 TBC1D2BQ9UPU7 963 aa12.06□□□□□ -0.48
LCN1-201ENST00000263598 PER1O15534 1290 aaPredicted RBP12.05□□□□□ -0.48
LCN1-201ENST00000263598 ST5P78524 1137 aa12.05□□□□□ -0.48
LCN1-201ENST00000263598 PRR5LQ6MZQ0 368 aa12.05□□□□□ -0.48
LCN1-201ENST00000263598 CNBD1Q8NA66 436 aa12.05□□□□□ -0.48
LCN1-201ENST00000263598 IL17REQ8NFR9 667 aa12.05□□□□□ -0.48
LCN1-201ENST00000263598 CNKSR1Q969H4 720 aa12.05□□□□□ -0.48
LCN1-201ENST00000263598 TIAM2Q8IVF5 1701 aa12.05□□□□□ -0.48
LCN1-201ENST00000263598 POTECB2RU33 542 aa12.04□□□□□ -0.48
LCN1-201ENST00000263598 CAPN15O75808 1086 aa12.04□□□□□ -0.48
LCN1-201ENST00000263598 HSPA1AP0DMV8 641 aaKnown RBP12.04□□□□□ -0.48
LCN1-201ENST00000263598 HSPA1BP0DMV9 641 aaKnown RBP12.04□□□□□ -0.48
LCN1-201ENST00000263598 SOGA3Q5TF21 947 aa12.04□□□□□ -0.48
LCN1-201ENST00000263598 STYK1Q6J9G0 422 aa12.04□□□□□ -0.48
LCN1-201ENST00000263598 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
LCN1-201ENST00000263598 TAOK3Q9H2K8 898 aa12.04□□□□□ -0.48
LCN1-201ENST00000263598 LTBP3Q9NS15 1303 aa12.04□□□□□ -0.48
LCN1-201ENST00000263598 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
LCN1-201ENST00000263598 PCNTO95613 3336 aa12.03□□□□□ -0.48
LCN1-201ENST00000263598 BTBD11A6QL63 1104 aa12.03□□□□□ -0.48
LCN1-201ENST00000263598 A1BGP04217 495 aa12.03□□□□□ -0.48
LCN1-201ENST00000263598 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
LCN1-201ENST00000263598 CAMTA2O94983 1202 aa12.02□□□□□ -0.49
LCN1-201ENST00000263598 SRGNP10124 158 aa12.02□□□□□ -0.49
LCN1-201ENST00000263598 CNGB1Q14028 1251 aaPredicted RBP12.02□□□□□ -0.49
LCN1-201ENST00000263598 CHADLQ6NUI6 762 aa12.02□□□□□ -0.49
LCN1-201ENST00000263598 PRPF40BQ6NWY9 871 aaKnown RBP12.02□□□□□ -0.49
LCN1-201ENST00000263598 DZIP3Q86Y13 1208 aaKnown RBP12.02□□□□□ -0.49
LCN1-201ENST00000263598 MASTLQ96GX5 879 aa12.02□□□□□ -0.49
LCN1-201ENST00000263598 NPC1L1Q9UHC9 1359 aa12.02□□□□□ -0.49
LCN1-201ENST00000263598 CREBZFQ9NS37 354 aa12.01□□□□□ -0.49
LCN1-201ENST00000263598 ZNF652Q9Y2D9 606 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms