RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
COMMD9-201ENST00000263401 GZF1Q9H116 711 aaPredicted RBP12.87□□□□□ -0.35
COMMD9-201ENST00000263401 IL25Q9H293 177 aa12.87□□□□□ -0.35
COMMD9-201ENST00000263401 DBF4Q9UBU7 674 aaPredicted RBP12.87□□□□□ -0.35
COMMD9-201ENST00000263401 CYP27B1O15528 508 aa12.86□□□□□ -0.35
COMMD9-201ENST00000263401 HSP90AA1P07900 732 aaKnown RBP12.86□□□□□ -0.35
COMMD9-201ENST00000263401 BRPF3Q9ULD4 1205 aa12.86□□□□□ -0.35
COMMD9-201ENST00000263401 NPHP3Q7Z494 1330 aa12.86□□□□□ -0.35
COMMD9-201ENST00000263401 PHKG2P15735 406 aa12.86□□□□□ -0.35
COMMD9-201ENST00000263401 TATP17735 454 aaPredicted RBP12.86□□□□□ -0.35
COMMD9-201ENST00000263401 SSH3Q8TE77 659 aa12.86□□□□□ -0.35
COMMD9-201ENST00000263401 CHMP5Q9NZZ3 219 aa12.86□□□□□ -0.35
COMMD9-201ENST00000263401 N4BP2Q86UW6 1770 aaPredicted RBP12.86□□□□□ -0.35
COMMD9-201ENST00000263401 BRINP3Q76B58 766 aa12.85□□□□□ -0.35
COMMD9-201ENST00000263401 CADPS2Q86UW7 1296 aa12.85□□□□□ -0.35
COMMD9-201ENST00000263401 SNX21Q969T3 373 aa12.85□□□□□ -0.35
COMMD9-201ENST00000263401 ZNF335Q9H4Z2 1342 aaPredicted RBP12.85□□□□□ -0.35
COMMD9-201ENST00000263401 CAMTA1Q9Y6Y1 1673 aa12.85□□□□□ -0.35
COMMD9-201ENST00000263401 ZNF790Q6PG37 636 aa12.85□□□□□ -0.35
COMMD9-201ENST00000263401 ZNF496Q96IT1 587 aaPredicted RBP12.85□□□□□ -0.35
COMMD9-201ENST00000263401 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.85□□□□□ -0.35
COMMD9-201ENST00000263401 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
COMMD9-201ENST00000263401 SIPA1L3O60292 1781 aaPredicted RBP12.85□□□□□ -0.35
COMMD9-201ENST00000263401 PDIA6Q15084 440 aa12.84□□□□□ -0.35
COMMD9-201ENST00000263401 SLC52A2Q9HAB3 445 aa12.84□□□□□ -0.35
COMMD9-201ENST00000263401 C9orf78Q9NZ63 289 aaPredicted RBP12.84□□□□□ -0.35
COMMD9-201ENST00000263401 C5P01031 1676 aa12.84□□□□□ -0.35
COMMD9-201ENST00000263401 TNS3Q68CZ2 1445 aa12.84□□□□□ -0.35
COMMD9-201ENST00000263401 XIRP1Q702N8 1843 aaKnown RBP12.84□□□□□ -0.35
COMMD9-201ENST00000263401 COL18A1P39060 1754 aa12.84□□□□□ -0.35
COMMD9-201ENST00000263401 K7ELQ4 463 aaPredicted RBP12.84□□□□□ -0.35
COMMD9-201ENST00000263401 HOXB7P09629 217 aa12.84□□□□□ -0.35
COMMD9-201ENST00000263401 USP16Q9Y5T5 823 aa12.84□□□□□ -0.35
COMMD9-201ENST00000263401 SPATA31A3Q5VYP0 1347 aa12.84□□□□□ -0.35
COMMD9-201ENST00000263401 RHPN1Q8TCX5 695 aa12.84□□□□□ -0.35
COMMD9-201ENST00000263401 OSBPL3Q9H4L5 887 aa12.84□□□□□ -0.35
COMMD9-201ENST00000263401 MCM4P33991 863 aa12.83□□□□□ -0.36
COMMD9-201ENST00000263401 DDIT3P35638 169 aa12.83□□□□□ -0.36
COMMD9-201ENST00000263401 POLA2Q14181 598 aa12.83□□□□□ -0.36
COMMD9-201ENST00000263401 NOL8Q76FK4 1167 aaKnown RBP12.83□□□□□ -0.36
COMMD9-201ENST00000263401 KLHDC4Q8TBB5 520 aa12.83□□□□□ -0.36
COMMD9-201ENST00000263401 NCOA3Q9Y6Q9 1424 aa12.83□□□□□ -0.36
COMMD9-201ENST00000263401 HEG1Q9ULI3 1381 aa12.83□□□□□ -0.36
COMMD9-201ENST00000263401 OS9Q13438 667 aaPredicted RBP12.83□□□□□ -0.36
COMMD9-201ENST00000263401 CASC1Q6TDU7 716 aa12.83□□□□□ -0.36
COMMD9-201ENST00000263401 PALD1Q9ULE6 856 aa12.83□□□□□ -0.36
COMMD9-201ENST00000263401 TUBGCP6Q96RT7 1819 aa12.83□□□□□ -0.36
COMMD9-201ENST00000263401 ERC2O15083 957 aa12.82□□□□□ -0.36
COMMD9-201ENST00000263401 KSR2Q6VAB6 950 aa12.82□□□□□ -0.36
COMMD9-201ENST00000263401 SUCLG2Q96I99 432 aa12.82□□□□□ -0.36
COMMD9-201ENST00000263401 CRYBG1Q9Y4K1 1723 aa12.82□□□□□ -0.36
COMMD9-201ENST00000263401 XAGE3Q8WTP9 111 aa12.82□□□□□ -0.36
COMMD9-201ENST00000263401 TNPO1Q92973 898 aaKnown RBP12.82□□□□□ -0.36
COMMD9-201ENST00000263401 SCN11AQ9UI33 1791 aa12.82□□□□□ -0.36
COMMD9-201ENST00000263401 SIL1Q9H173 461 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 IGKV5-2P06315 115 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 CHMLP26374 656 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 COPS6Q7L5N1 327 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 ESYT1Q9BSJ8 1104 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 ANO2Q9NQ90 1003 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 STRN4Q9NRL3 753 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 SSFA2P28290 1259 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 PKP1Q13835 747 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 RIC3Q7Z5B4 369 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 IFNL2Q8IZJ0 200 aa12.81□□□□□ -0.36
COMMD9-201ENST00000263401 BICC1Q9H694 974 aaKnown RBP12.8□□□□□ -0.36
COMMD9-201ENST00000263401 DDX21Q9NR30 783 aaKnown RBP eCLIP12.8□□□□□ -0.36
COMMD9-201ENST00000263401 ZGPATQ8N5A5 531 aaKnown RBP12.8□□□□□ -0.36
COMMD9-201ENST00000263401 PI4K2BQ8TCG2 481 aa12.8□□□□□ -0.36
COMMD9-201ENST00000263401 MYD88Q99836 296 aa12.8□□□□□ -0.36
COMMD9-201ENST00000263401 KDM4FA0A1W2PPD8 638 aa12.79□□□□□ -0.36
COMMD9-201ENST00000263401 RABEP1Q15276 862 aa12.79□□□□□ -0.36
COMMD9-201ENST00000263401 TOM1L2Q6ZVM7 507 aa12.79□□□□□ -0.36
COMMD9-201ENST00000263401 CHAMP1Q96JM3 812 aa12.79□□□□□ -0.36
COMMD9-201ENST00000263401 HYPKQ9NX55 129 aa12.79□□□□□ -0.36
COMMD9-201ENST00000263401 ATP5J2-PTCD1G3V325 749 aa12.79□□□□□ -0.36
COMMD9-201ENST00000263401 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
COMMD9-201ENST00000263401 REC8O95072 547 aa12.79□□□□□ -0.36
COMMD9-201ENST00000263401 EPHA10Q5JZY3 1008 aa12.79□□□□□ -0.36
COMMD9-201ENST00000263401 STAP2Q9UGK3 403 aa12.79□□□□□ -0.36
COMMD9-201ENST00000263401 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
COMMD9-201ENST00000263401 DCCP43146 1447 aa12.78□□□□□ -0.36
COMMD9-201ENST00000263401 GRM8O00222 908 aa12.78□□□□□ -0.36
COMMD9-201ENST00000263401 CABP4P57796 275 aa12.78□□□□□ -0.36
COMMD9-201ENST00000263401 TTC5Q8N0Z6 440 aa12.78□□□□□ -0.36
COMMD9-201ENST00000263401 SLAIN2Q9P270 581 aa12.78□□□□□ -0.36
COMMD9-201ENST00000263401 ADAMTS7Q9UKP4 1686 aa12.78□□□□□ -0.36
COMMD9-201ENST00000263401 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
COMMD9-201ENST00000263401 DTNBO60941 627 aa12.78□□□□□ -0.36
COMMD9-201ENST00000263401 FOXD4L5Q5VV16 416 aaPredicted RBP12.78□□□□□ -0.36
COMMD9-201ENST00000263401 FOXD4L4Q8WXT5 416 aaPredicted RBP12.78□□□□□ -0.36
COMMD9-201ENST00000263401 KIF1BPQ96EK5 621 aa12.78□□□□□ -0.36
COMMD9-201ENST00000263401 UPF3BQ9BZI7 483 aaKnown RBP12.78□□□□□ -0.36
COMMD9-201ENST00000263401 STRCQ7RTU9 1775 aa12.77□□□□□ -0.36
COMMD9-201ENST00000263401 TLR7Q9NYK1 1049 aaKnown RBP12.77□□□□□ -0.36
COMMD9-201ENST00000263401 NEK4P51957 841 aa12.77□□□□□ -0.37
COMMD9-201ENST00000263401 LINS1Q8NG48 757 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms