RNA–Protein interactions for RNA: ENST00000263238.6

ACTR3-201, Transcript of ARP3 actin related protein 3 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3, Length 6,718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-201ENST00000263238 SNX21Q969T3 373 aa15.39■□□□□ 0.05
ACTR3-201ENST00000263238 KRT18P05783 430 aaKnown RBP15.39■□□□□ 0.05
ACTR3-201ENST00000263238 SDSP20132 328 aa15.39■□□□□ 0.05
ACTR3-201ENST00000263238 MICALL1Q8N3F8 863 aa15.39■□□□□ 0.05
ACTR3-201ENST00000263238 SH2B1Q9NRF2 756 aaPredicted RBP15.39■□□□□ 0.05
ACTR3-201ENST00000263238 NLRP6P59044 892 aa15.39■□□□□ 0.05
ACTR3-201ENST00000263238 KRBA2Q6ZNG9 492 aa15.38■□□□□ 0.05
ACTR3-201ENST00000263238 CCDC43Q96MW1 224 aaKnown RBP15.38■□□□□ 0.05
ACTR3-201ENST00000263238 EVA1CP58658 441 aa15.38■□□□□ 0.05
ACTR3-201ENST00000263238 NOL7Q9UMY1 257 aaKnown RBP15.38■□□□□ 0.05
ACTR3-201ENST00000263238 MAP2K1Q02750 393 aaPredicted RBP15.38■□□□□ 0.05
ACTR3-201ENST00000263238 DNM1Q05193 864 aaKnown RBP15.38■□□□□ 0.05
ACTR3-201ENST00000263238 ZNF397Q8NF99 534 aaPredicted RBP15.38■□□□□ 0.05
ACTR3-201ENST00000263238 GOPCQ9HD26 462 aa15.38■□□□□ 0.05
ACTR3-201ENST00000263238 RIOK3O14730 519 aaKnown RBP15.38■□□□□ 0.05
ACTR3-201ENST00000263238 KRT32Q14532 448 aa15.38■□□□□ 0.05
ACTR3-201ENST00000263238 ZRSR2Q15696 482 aaKnown RBP15.38■□□□□ 0.05
ACTR3-201ENST00000263238 STAC3Q96MF2 364 aa15.38■□□□□ 0.05
ACTR3-201ENST00000263238 VPS18Q9P253 973 aa15.38■□□□□ 0.05
ACTR3-201ENST00000263238 MATR3P43243 847 aaKnown RBP eCLIP15.37■□□□□ 0.051e-6■■■■■ 28.2
ACTR3-201ENST00000263238 CDK13Q14004 1512 aaKnown RBP15.37■□□□□ 0.05
ACTR3-201ENST00000263238 PRG4Q92954 1404 aaPredicted RBP15.37■□□□□ 0.05
ACTR3-201ENST00000263238 GOLGA6L10A0A0M3HER8 536 aa15.37■□□□□ 0.05
ACTR3-201ENST00000263238 FCHSD2O94868 740 aa15.37■□□□□ 0.05
ACTR3-201ENST00000263238 CTAGE5O15320 804 aa15.37■□□□□ 0.05
ACTR3-201ENST00000263238 POLR3DP05423 398 aaPredicted RBP15.37■□□□□ 0.05
ACTR3-201ENST00000263238 TTC31Q49AM3 519 aaPredicted RBP15.37■□□□□ 0.05
ACTR3-201ENST00000263238 RAB11FIP4Q86YS3 637 aa15.37■□□□□ 0.05
ACTR3-201ENST00000263238 SMC5Q8IY18 1101 aa15.37■□□□□ 0.05
ACTR3-201ENST00000263238 CCDC8Q9H0W5 538 aaPredicted RBP15.37■□□□□ 0.05
ACTR3-201ENST00000263238 AFAP1Q8N556 730 aa15.36■□□□□ 0.05
ACTR3-201ENST00000263238 RLBP1P12271 317 aa15.36■□□□□ 0.05
ACTR3-201ENST00000263238 SLC3A2P08195 630 aaKnown RBP15.36■□□□□ 0.05
ACTR3-201ENST00000263238 CAPN2P17655 700 aa15.36■□□□□ 0.05
ACTR3-201ENST00000263238 CCDC178Q5BJE1 867 aa15.36■□□□□ 0.05
ACTR3-201ENST00000263238 KIF1BPQ96EK5 621 aa15.36■□□□□ 0.05
ACTR3-201ENST00000263238 SLU7O95391 586 aaKnown RBP15.36■□□□□ 0.05
ACTR3-201ENST00000263238 HS1BP3Q53T59 392 aa15.36■□□□□ 0.05
ACTR3-201ENST00000263238 CNNM3Q8NE01 707 aa15.36■□□□□ 0.05
ACTR3-201ENST00000263238 SYCP1Q15431 976 aa15.35■□□□□ 0.05
ACTR3-201ENST00000263238 SPA17Q15506 151 aa15.35■□□□□ 0.05
ACTR3-201ENST00000263238 AOPEPQ8N6M6 819 aa15.35■□□□□ 0.05
ACTR3-201ENST00000263238 TAF4BQ92750 862 aa15.35■□□□□ 0.05
ACTR3-201ENST00000263238 C8orf76Q96K31 380 aa15.35■□□□□ 0.05
ACTR3-201ENST00000263238 ARFGAP3Q9NP61 516 aa15.35■□□□□ 0.05
ACTR3-201ENST00000263238 MICALCLQ6ZW33 695 aa15.35■□□□□ 0.05
ACTR3-201ENST00000263238 CCDC150Q8NCX0 1101 aa15.35■□□□□ 0.05
ACTR3-201ENST00000263238 CNNM1Q9NRU3 951 aa15.35■□□□□ 0.05
ACTR3-201ENST00000263238 TOP2BQ02880 1626 aa15.35■□□□□ 0.05
ACTR3-201ENST00000263238 HDAC1Q13547 482 aaPredicted RBP15.35■□□□□ 0.05
ACTR3-201ENST00000263238 LUC7LQ9NQ29 371 aaKnown RBP15.35■□□□□ 0.05
ACTR3-201ENST00000263238 SYT10Q6XYQ8 523 aa15.35■□□□□ 0.05
ACTR3-201ENST00000263238 EFCAB5A4FU69 1503 aa15.35■□□□□ 0.05
ACTR3-201ENST00000263238 LUZP1Q86V48 1076 aa15.34■□□□□ 0.05
ACTR3-201ENST00000263238 CCDC82Q8N4S0 544 aa15.34■□□□□ 0.05
ACTR3-201ENST00000263238 ZNF526Q8TF50 670 aaPredicted RBP15.34■□□□□ 0.05
ACTR3-201ENST00000263238 DACT1Q9NYF0 836 aa15.34■□□□□ 0.05
ACTR3-201ENST00000263238 HECW1Q76N89 1606 aa15.34■□□□□ 0.05
ACTR3-201ENST00000263238 PHACTR2O75167 634 aa15.34■□□□□ 0.05
ACTR3-201ENST00000263238 CDKL5O76039 1030 aa15.34■□□□□ 0.05
ACTR3-201ENST00000263238 RAPGEF4Q8WZA2 1011 aa15.34■□□□□ 0.05
ACTR3-201ENST00000263238 MCM3P25205 808 aa15.34■□□□□ 0.05
ACTR3-201ENST00000263238 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.34■□□□□ 0.05
ACTR3-201ENST00000263238 INCENPQ9NQS7 918 aa15.34■□□□□ 0.05
ACTR3-201ENST00000263238 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.34■□□□□ 0.051e-6■■■■■ 67.7
ACTR3-201ENST00000263238 GLRX3O76003 335 aaKnown RBP15.33■□□□□ 0.04
ACTR3-201ENST00000263238 CCDC85AQ96PX6 553 aaPredicted RBP15.33■□□□□ 0.04
ACTR3-201ENST00000263238 TXNDC2Q86VQ3 553 aa15.33■□□□□ 0.04
ACTR3-201ENST00000263238 FAM200AQ8TCP9 573 aa15.33■□□□□ 0.04
ACTR3-201ENST00000263238 TCEANC2Q96MN5 208 aa15.33■□□□□ 0.04
ACTR3-201ENST00000263238 POTEB2H3BUK9 544 aa15.33■□□□□ 0.04
ACTR3-201ENST00000263238 IFFO1Q0D2I5 559 aa15.33■□□□□ 0.04
ACTR3-201ENST00000263238 CCDC144CPQ8IYA2 1237 aa15.33■□□□□ 0.04
ACTR3-201ENST00000263238 NLRP2Q9NX02 1062 aa15.33■□□□□ 0.04
ACTR3-201ENST00000263238 TYRO3Q06418 890 aa15.33■□□□□ 0.04
ACTR3-201ENST00000263238 ABTB2Q8N961 1025 aa15.33■□□□□ 0.04
ACTR3-201ENST00000263238 NF2P35240 595 aa15.32■□□□□ 0.04
ACTR3-201ENST00000263238 SSBP05455 408 aaKnown RBP eCLIP15.32■□□□□ 0.04
ACTR3-201ENST00000263238 UBASH3AP57075 661 aa15.32■□□□□ 0.04
ACTR3-201ENST00000263238 MAATS1Q7Z4T9 603 aa15.32■□□□□ 0.04
ACTR3-201ENST00000263238 MYRIPQ8NFW9 859 aa15.32■□□□□ 0.04
ACTR3-201ENST00000263238 AQRO60306 1485 aaKnown RBP eCLIP15.32■□□□□ 0.04
ACTR3-201ENST00000263238 NCAPD3P42695 1498 aa15.32■□□□□ 0.04
ACTR3-201ENST00000263238 IVLP07476 585 aa15.32■□□□□ 0.04
ACTR3-201ENST00000263238 GBP2P32456 591 aaPredicted RBP15.32■□□□□ 0.04
ACTR3-201ENST00000263238 PUF60Q9UHX1 559 aaKnown RBP15.32■□□□□ 0.04
ACTR3-201ENST00000263238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.31■□□□□ 0.041e-6■■■□□ 14.6
ACTR3-201ENST00000263238 IMMTQ16891 758 aaKnown RBP15.31■□□□□ 0.04
ACTR3-201ENST00000263238 RASSF4Q9H2L5 321 aa15.31■□□□□ 0.04
ACTR3-201ENST00000263238 JADE2Q9NQC1 790 aa15.31■□□□□ 0.04
ACTR3-201ENST00000263238 F13A1P00488 732 aa15.31■□□□□ 0.04
ACTR3-201ENST00000263238 BTBD11A6QL63 1104 aa15.3■□□□□ 0.04
ACTR3-201ENST00000263238 KARSQ15046 597 aaKnown RBP15.3■□□□□ 0.04
ACTR3-201ENST00000263238 FEZ1Q99689 392 aa15.3■□□□□ 0.04
ACTR3-201ENST00000263238 LRRC2Q9BYS8 371 aa15.3■□□□□ 0.04
ACTR3-201ENST00000263238 SYT1P21579 422 aa15.3■□□□□ 0.04
ACTR3-201ENST00000263238 HLTFQ14527 1009 aaKnown RBP eCLIP15.3■□□□□ 0.04
ACTR3-201ENST00000263238 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.3■□□□□ 0.04
ACTR3-201ENST00000263238 FAM83GA6ND36 823 aa15.3■□□□□ 0.04
ACTR3-201ENST00000263238 IKQ13123 557 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms