RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 CCDC148Q8NFR7 591 aa17.28■□□□□ 0.36
CCDC6-201ENST00000263102 NBPF6Q5VWK0 638 aa17.28■□□□□ 0.36
CCDC6-201ENST00000263102 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
CCDC6-201ENST00000263102 NBPF4Q96M43 638 aa17.28■□□□□ 0.36
CCDC6-201ENST00000263102 MCM10Q7L590 875 aa17.28■□□□□ 0.36
CCDC6-201ENST00000263102 FAM212AQ96EL1 285 aa17.27■□□□□ 0.36
CCDC6-201ENST00000263102 FOXO3O43524 673 aa17.27■□□□□ 0.36
CCDC6-201ENST00000263102 LMOD1P29536 600 aaPredicted RBP17.27■□□□□ 0.36
CCDC6-201ENST00000263102 PPP2R1AP30153 589 aa17.27■□□□□ 0.35
CCDC6-201ENST00000263102 FILIP1Q7Z7B0 1213 aa17.27■□□□□ 0.35
CCDC6-201ENST00000263102 NOP2P46087 812 aaKnown RBP17.26■□□□□ 0.35
CCDC6-201ENST00000263102 IFFO1Q0D2I5 559 aa17.26■□□□□ 0.35
CCDC6-201ENST00000263102 PRPF4BQ13523 1007 aaKnown RBP17.26■□□□□ 0.35
CCDC6-201ENST00000263102 NBPF8Q3BBV2 869 aa17.26■□□□□ 0.35
CCDC6-201ENST00000263102 NBPF14Q5TI25 921 aa17.26■□□□□ 0.35
CCDC6-201ENST00000263102 SSRP1Q08945 709 aaKnown RBP17.26■□□□□ 0.35
CCDC6-201ENST00000263102 STAC3Q96MF2 364 aa17.26■□□□□ 0.35
CCDC6-201ENST00000263102 FERMT1Q9BQL6 677 aa17.26■□□□□ 0.35
CCDC6-201ENST00000263102 GIGYF2Q6Y7W6 1299 aaKnown RBP17.26■□□□□ 0.35
CCDC6-201ENST00000263102 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
CCDC6-201ENST00000263102 MYOM3Q5VTT5 1437 aa17.26■□□□□ 0.35
CCDC6-201ENST00000263102 CATIPQ7Z7H3 387 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 LUZP1Q86V48 1076 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCDC6-201ENST00000263102 WDR33Q9C0J8 1336 aaKnown RBP17.25■□□□□ 0.35
CCDC6-201ENST00000263102 IFIT3O14879 490 aaKnown RBP17.25■□□□□ 0.35
CCDC6-201ENST00000263102 KRT32Q14532 448 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 KAT14Q9H8E8 782 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 TSPY2A6NKD2 308 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 GOLGA8AA7E2F4 631 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 GOLGA8BA8MQT2 603 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 TRAK2O60296 914 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 UQCRHP07919 91 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 ATP2B3Q16720 1220 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 OGFOD1Q8N543 542 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 PPM1EQ8WY54 764 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 CDCA7LQ96GN5 454 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 IDEP14735 1019 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 CETN1Q12798 172 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 CCDC40Q4G0X9 1142 aa17.25■□□□□ 0.35
CCDC6-201ENST00000263102 CCDC8Q9H0W5 538 aaPredicted RBP17.25■□□□□ 0.35
CCDC6-201ENST00000263102 SMTNL1A8MU46 457 aa17.24■□□□□ 0.35
CCDC6-201ENST00000263102 PHACTR2O75167 634 aa17.24■□□□□ 0.35
CCDC6-201ENST00000263102 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
CCDC6-201ENST00000263102 PRPF40BQ6NWY9 871 aaKnown RBP17.24■□□□□ 0.35
CCDC6-201ENST00000263102 CCDC174Q6PII3 467 aa17.24■□□□□ 0.35
CCDC6-201ENST00000263102 EIF3JO75822 258 aaKnown RBP17.24■□□□□ 0.35
CCDC6-201ENST00000263102 TMCO5BA8MYB1 307 aa17.24■□□□□ 0.35
CCDC6-201ENST00000263102 NUDT16Q96DE0 195 aaKnown RBP17.24■□□□□ 0.35
CCDC6-201ENST00000263102 SCAPERQ9BY12 1400 aa17.24■□□□□ 0.35
CCDC6-201ENST00000263102 ZNF213O14771 459 aa17.23■□□□□ 0.35
CCDC6-201ENST00000263102 BAG3O95817 575 aa17.23■□□□□ 0.35
CCDC6-201ENST00000263102 NUP62CLQ9H1M0 184 aa17.23■□□□□ 0.35
CCDC6-201ENST00000263102 SH3BP5O60239 455 aa17.23■□□□□ 0.35
CCDC6-201ENST00000263102 PRKCSHP14314 528 aaPredicted RBP17.23■□□□□ 0.35
CCDC6-201ENST00000263102 CPLX3Q8WVH0 158 aa17.23■□□□□ 0.35
CCDC6-201ENST00000263102 EXOC6BQ9Y2D4 811 aa17.23■□□□□ 0.35
CCDC6-201ENST00000263102 BIRC2Q13490 618 aa17.23■□□□□ 0.35
CCDC6-201ENST00000263102 CALML4Q96GE6 196 aa17.23■□□□□ 0.35
CCDC6-201ENST00000263102 FERMT3Q86UX7 667 aa17.23■□□□□ 0.35
CCDC6-201ENST00000263102 RAB11FIP4Q86YS3 637 aa17.23■□□□□ 0.35
CCDC6-201ENST00000263102 ZNF710Q8N1W2 664 aa17.23■□□□□ 0.35
CCDC6-201ENST00000263102 CDC5LQ99459 802 aaKnown RBP17.22■□□□□ 0.35
CCDC6-201ENST00000263102 AQRO60306 1485 aaKnown RBP eCLIP17.22■□□□□ 0.358e-8■■■■■ 29.4
CCDC6-201ENST00000263102 CCDC83Q8IWF9 413 aa17.22■□□□□ 0.35
CCDC6-201ENST00000263102 TFCP2L1Q9NZI6 479 aa17.22■□□□□ 0.35
CCDC6-201ENST00000263102 A0A087WZG4 1122 aa17.22■□□□□ 0.35
CCDC6-201ENST00000263102 TERF1P54274 439 aa17.22■□□□□ 0.35
CCDC6-201ENST00000263102 RBM10P98175 930 aaKnown RBP17.22■□□□□ 0.35
CCDC6-201ENST00000263102 DMRT2Q9Y5R5 561 aa17.22■□□□□ 0.35
CCDC6-201ENST00000263102 NUP88Q99567 741 aaPredicted RBP17.22■□□□□ 0.35
CCDC6-201ENST00000263102 RAB3IL1Q8TBN0 382 aa17.22■□□□□ 0.35
CCDC6-201ENST00000263102 SMARCA5O60264 1052 aaPredicted RBP17.21■□□□□ 0.35
CCDC6-201ENST00000263102 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.35
CCDC6-201ENST00000263102 CIZ1Q9ULV3 898 aaPredicted RBP17.21■□□□□ 0.35
CCDC6-201ENST00000263102 NOD1Q9Y239 953 aa17.21■□□□□ 0.35
CCDC6-201ENST00000263102 CCDC196A0A1B0GTZ2 297 aa17.21■□□□□ 0.35
CCDC6-201ENST00000263102 LDHCP07864 332 aa17.21■□□□□ 0.35
CCDC6-201ENST00000263102 WAPLQ7Z5K2 1190 aa17.21■□□□□ 0.35
CCDC6-201ENST00000263102 PROCA1Q8NCQ7 364 aaPredicted RBP17.21■□□□□ 0.35
CCDC6-201ENST00000263102 LRRC45Q96CN5 670 aa17.21■□□□□ 0.35
CCDC6-201ENST00000263102 CHRNA2Q15822 529 aa17.21■□□□□ 0.35
CCDC6-201ENST00000263102 AKNAD1Q5T1N1 836 aa17.21■□□□□ 0.35
CCDC6-201ENST00000263102 JARID2Q92833 1246 aaPredicted RBP17.21■□□□□ 0.35
CCDC6-201ENST00000263102 ZSCAN31Q96LW9 406 aaPredicted RBP17.21■□□□□ 0.35
CCDC6-201ENST00000263102 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.35
CCDC6-201ENST00000263102 MTIF2P46199 727 aaKnown RBP17.21■□□□□ 0.35
CCDC6-201ENST00000263102 PPP6R1Q9UPN7 881 aa17.21■□□□□ 0.35
CCDC6-201ENST00000263102 GAPVD1Q14C86 1478 aa17.21■□□□□ 0.35
CCDC6-201ENST00000263102 NDC80O14777 642 aa17.2■□□□□ 0.34
CCDC6-201ENST00000263102 FGFR1OPO95684 399 aaKnown RBP17.2■□□□□ 0.34
CCDC6-201ENST00000263102 GJC1P36383 396 aa17.2■□□□□ 0.34
CCDC6-201ENST00000263102 SP4Q02446 784 aa17.2■□□□□ 0.34
CCDC6-201ENST00000263102 JDP2Q8WYK2 163 aa17.2■□□□□ 0.34
CCDC6-201ENST00000263102 PARP3Q9Y6F1 533 aa17.2■□□□□ 0.34
CCDC6-201ENST00000263102 CCDC117Q8IWD4 279 aaPredicted RBP17.2■□□□□ 0.34
CCDC6-201ENST00000263102 DUSP27Q5VZP5 1158 aa17.2■□□□□ 0.34
CCDC6-201ENST00000263102 PPP1R14CQ8TAE6 165 aa17.2■□□□□ 0.34
CCDC6-201ENST00000263102 SNRKQ9NRH2 765 aa17.2■□□□□ 0.34
CCDC6-201ENST00000263102 TBCAO75347 108 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms