RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 MCM4P33991 863 aa18.37■□□□□ 0.53
TIMP2-201ENST00000262768 CNTROBQ8N137 903 aa18.37■□□□□ 0.53
TIMP2-201ENST00000262768 ZNF790Q6PG37 636 aa18.36■□□□□ 0.53
TIMP2-201ENST00000262768 NPHP4O75161 1426 aaPredicted RBP18.36■□□□□ 0.53
TIMP2-201ENST00000262768 KIF1BPQ96EK5 621 aa18.36■□□□□ 0.53
TIMP2-201ENST00000262768 TCEANC2Q96MN5 208 aa18.36■□□□□ 0.53
TIMP2-201ENST00000262768 COL3A1P02461 1466 aaPredicted RBP18.36■□□□□ 0.53
TIMP2-201ENST00000262768 NEURL4Q96JN8 1562 aa18.36■□□□□ 0.53
TIMP2-201ENST00000262768 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
TIMP2-201ENST00000262768 TRIM44Q96DX7 344 aaPredicted RBP18.35■□□□□ 0.53
TIMP2-201ENST00000262768 HTATSF1O43719 755 aaKnown RBP18.35■□□□□ 0.53
TIMP2-201ENST00000262768 ANKRD13DQ6ZTN6 518 aa18.35■□□□□ 0.53
TIMP2-201ENST00000262768 KDM4AO75164 1064 aa18.35■□□□□ 0.53
TIMP2-201ENST00000262768 HSP90B1P14625 803 aaKnown RBP18.35■□□□□ 0.53
TIMP2-201ENST00000262768 HDAC5Q9UQL6 1122 aa18.35■□□□□ 0.53
TIMP2-201ENST00000262768 A1BGP04217 495 aa18.34■□□□□ 0.53
TIMP2-201ENST00000262768 CPA1P15085 419 aa18.34■□□□□ 0.53
TIMP2-201ENST00000262768 RABEP1Q15276 862 aa18.34■□□□□ 0.53
TIMP2-201ENST00000262768 CHAMP1Q96JM3 812 aa18.34■□□□□ 0.53
TIMP2-201ENST00000262768 HSP90AB4PQ58FF6 505 aa18.34■□□□□ 0.53
TIMP2-201ENST00000262768 ZNF335Q9H4Z2 1342 aaPredicted RBP18.34■□□□□ 0.53
TIMP2-201ENST00000262768 UNC5CLQ8IV45 518 aa18.34■□□□□ 0.53
TIMP2-201ENST00000262768 GIGYF1O75420 1035 aaPredicted RBP18.33■□□□□ 0.53
TIMP2-201ENST00000262768 STK3Q13188 491 aa18.33■□□□□ 0.52
TIMP2-201ENST00000262768 KSR2Q6VAB6 950 aa18.33■□□□□ 0.52
TIMP2-201ENST00000262768 FMNL2Q96PY5 1086 aa18.33■□□□□ 0.52
TIMP2-201ENST00000262768 OVOS2A0A0J9YW53 1432 aa18.33■□□□□ 0.52
TIMP2-201ENST00000262768 OVOS2Q6IE36 1432 aa18.33■□□□□ 0.52
TIMP2-201ENST00000262768 ZGPATQ8N5A5 531 aaKnown RBP18.33■□□□□ 0.52
TIMP2-201ENST00000262768 TNPO1Q92973 898 aaKnown RBP18.33■□□□□ 0.52
TIMP2-201ENST00000262768 HYPKQ9NX55 129 aa18.33■□□□□ 0.52
TIMP2-201ENST00000262768 MED14O60244 1454 aa18.32■□□□□ 0.52
TIMP2-201ENST00000262768 PRPF40AO75400 957 aaKnown RBP18.32■□□□□ 0.52
TIMP2-201ENST00000262768 LARP1Q6PKG0 1096 aaKnown RBP18.32■□□□□ 0.52
TIMP2-201ENST00000262768 BICC1Q9H694 974 aaKnown RBP18.32■□□□□ 0.52
TIMP2-201ENST00000262768 ZCRB1Q8TBF4 217 aaKnown RBP18.32■□□□□ 0.52
TIMP2-201ENST00000262768 ACSBG1Q96GR2 724 aa18.32■□□□□ 0.52
TIMP2-201ENST00000262768 SLAIN2Q9P270 581 aa18.32■□□□□ 0.52
TIMP2-201ENST00000262768 GRM8O00222 908 aa18.31■□□□□ 0.52
TIMP2-201ENST00000262768 KIAA0232Q92628 1395 aa18.31■□□□□ 0.52
TIMP2-201ENST00000262768 CDC42BPGQ6DT37 1551 aa18.31■□□□□ 0.52
TIMP2-201ENST00000262768 SOS1Q07889 1333 aaPredicted RBP18.31■□□□□ 0.52
TIMP2-201ENST00000262768 VPS37CA5D8V6 355 aaPredicted RBP18.31■□□□□ 0.52
TIMP2-201ENST00000262768 GTF2E1P29083 439 aaPredicted RBP18.31■□□□□ 0.52
TIMP2-201ENST00000262768 SNRPA1P09661 255 aaKnown RBP18.3■□□□□ 0.52
TIMP2-201ENST00000262768 PRPF40BQ6NWY9 871 aaKnown RBP18.3■□□□□ 0.52
TIMP2-201ENST00000262768 STK11IPQ8N1F8 1099 aa18.3■□□□□ 0.52
TIMP2-201ENST00000262768 EDC3Q96F86 508 aaKnown RBP18.3■□□□□ 0.52
TIMP2-201ENST00000262768 GDPD2Q9HCC8 539 aa18.3■□□□□ 0.52
TIMP2-201ENST00000262768 FKBP4Q02790 459 aaKnown RBP eCLIP18.3■□□□□ 0.52
TIMP2-201ENST00000262768 SNRKQ9NRH2 765 aa18.3■□□□□ 0.52
TIMP2-201ENST00000262768 TMOD3Q9NYL9 352 aa18.3■□□□□ 0.52
TIMP2-201ENST00000262768 DLC1Q96QB1 1528 aa18.3■□□□□ 0.52
TIMP2-201ENST00000262768 BTG4Q9NY30 223 aa18.3■□□□□ 0.52
TIMP2-201ENST00000262768 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.3■□□□□ 0.52
TIMP2-201ENST00000262768 CAVIN1Q6NZI2 390 aaKnown RBP18.29■□□□□ 0.52
TIMP2-201ENST00000262768 SHPRHQ149N8 1683 aa18.29■□□□□ 0.52
TIMP2-201ENST00000262768 ERBB3P21860 1342 aa18.29■□□□□ 0.52
TIMP2-201ENST00000262768 DDX11L8A8MPP1 907 aa18.29■□□□□ 0.52
TIMP2-201ENST00000262768 ZKSCAN1P17029 563 aaPredicted RBP18.28■□□□□ 0.52
TIMP2-201ENST00000262768 SUCLG2Q96I99 432 aa18.28■□□□□ 0.52
TIMP2-201ENST00000262768 RUFY2Q8WXA3 655 aa18.28■□□□□ 0.52
TIMP2-201ENST00000262768 WASHC4Q2M389 1173 aa18.28■□□□□ 0.52
TIMP2-201ENST00000262768 LMBR1LQ6UX01 489 aa18.28■□□□□ 0.52
TIMP2-201ENST00000262768 JAKMIP1Q96N16 626 aaKnown RBP18.28■□□□□ 0.52
TIMP2-201ENST00000262768 USP26Q9BXU7 913 aa18.27■□□□□ 0.52
TIMP2-201ENST00000262768 SLC52A2Q9HAB3 445 aa18.27■□□□□ 0.52
TIMP2-201ENST00000262768 TECPR2O15040 1411 aa18.27■□□□□ 0.52
TIMP2-201ENST00000262768 USP31Q70CQ4 1352 aa18.27■□□□□ 0.52
TIMP2-201ENST00000262768 CEP170BQ9Y4F5 1589 aaPredicted RBP18.27■□□□□ 0.52
TIMP2-201ENST00000262768 CASTP20810 708 aaKnown RBP18.27■□□□□ 0.51
TIMP2-201ENST00000262768 BRPF1P55201 1214 aaPredicted RBP18.27■□□□□ 0.51
TIMP2-201ENST00000262768 RNF214Q8ND24 703 aa18.27■□□□□ 0.51
TIMP2-201ENST00000262768 MPNDQ8N594 471 aa18.26■□□□□ 0.51
TIMP2-201ENST00000262768 TOMM22Q9NS69 142 aa18.26■□□□□ 0.51
TIMP2-201ENST00000262768 PHKG2P15735 406 aa18.26■□□□□ 0.51
TIMP2-201ENST00000262768 BICDL1Q6ZP65 573 aa18.26■□□□□ 0.51
TIMP2-201ENST00000262768 DDX46Q7L014 1031 aaKnown RBP18.26■□□□□ 0.51
TIMP2-201ENST00000262768 ESYT1Q9BSJ8 1104 aa18.26■□□□□ 0.51
TIMP2-201ENST00000262768 DDX21Q9NR30 783 aaKnown RBP eCLIP18.26■□□□□ 0.51
TIMP2-201ENST00000262768 APPP05067 770 aa18.26■□□□□ 0.51
TIMP2-201ENST00000262768 BEND3Q5T5X7 828 aa18.25■□□□□ 0.51
TIMP2-201ENST00000262768 LINS1Q8NG48 757 aa18.25■□□□□ 0.51
TIMP2-201ENST00000262768 CRB1P82279 1406 aa18.25■□□□□ 0.51
TIMP2-201ENST00000262768 ZNF594Q96JF6 807 aaPredicted RBP18.25■□□□□ 0.51
TIMP2-201ENST00000262768 ECHDC1Q9NTX5 307 aa18.25■□□□□ 0.51
TIMP2-201ENST00000262768 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
TIMP2-201ENST00000262768 GLRX3O76003 335 aaKnown RBP18.24■□□□□ 0.51
TIMP2-201ENST00000262768 PKP1Q13835 747 aa18.24■□□□□ 0.51
TIMP2-201ENST00000262768 CHMLP26374 656 aa18.24■□□□□ 0.51
TIMP2-201ENST00000262768 L1TD1Q5T7N2 865 aaKnown RBP18.24■□□□□ 0.51
TIMP2-201ENST00000262768 TBC1D2BQ9UPU7 963 aa18.24■□□□□ 0.51
TIMP2-201ENST00000262768 DIP2AQ14689 1571 aa18.24■□□□□ 0.51
TIMP2-201ENST00000262768 CYP27B1O15528 508 aa18.24■□□□□ 0.51
TIMP2-201ENST00000262768 PTMAP06454 111 aaKnown RBP18.24■□□□□ 0.51
TIMP2-201ENST00000262768 TTLL7Q6ZT98 887 aa18.24■□□□□ 0.51
TIMP2-201ENST00000262768 GOLGA6L4A6NEF3 574 aa18.23■□□□□ 0.51
TIMP2-201ENST00000262768 DCAF5Q96JK2 942 aa18.23■□□□□ 0.51
TIMP2-201ENST00000262768 PTCH1Q13635 1447 aa18.23■□□□□ 0.51
TIMP2-201ENST00000262768 FERMT3Q86UX7 667 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms