RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 HOXB7P09629 217 aa16.82■□□□□ 0.28
VMP1-201ENST00000262291 EVA1CP58658 441 aa16.82■□□□□ 0.28
VMP1-201ENST00000262291 ATP8B2P98198 1209 aa16.82■□□□□ 0.28
VMP1-201ENST00000262291 TTC22Q5TAA0 569 aa16.82■□□□□ 0.28
VMP1-201ENST00000262291 CPDO75976 1380 aa16.81■□□□□ 0.28
VMP1-201ENST00000262291 IL1RAPL2Q9NP60 686 aa16.81■□□□□ 0.28
VMP1-201ENST00000262291 USP16Q9Y5T5 823 aa16.81■□□□□ 0.28
VMP1-201ENST00000262291 CRYBG1Q9Y4K1 1723 aa16.81■□□□□ 0.28
VMP1-201ENST00000262291 CABP4P57796 275 aa16.81■□□□□ 0.28
VMP1-201ENST00000262291 PPP1R42Q7Z4L9 355 aa16.81■□□□□ 0.28
VMP1-201ENST00000262291 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
VMP1-201ENST00000262291 WDR17Q8IZU2 1322 aa16.8■□□□□ 0.28
VMP1-201ENST00000262291 CACNA1FO60840 1977 aa16.8■□□□□ 0.28
VMP1-201ENST00000262291 JARID2Q92833 1246 aaPredicted RBP16.8■□□□□ 0.28
VMP1-201ENST00000262291 PDIA6Q15084 440 aa16.79■□□□□ 0.28
VMP1-201ENST00000262291 TTC5Q8N0Z6 440 aa16.79■□□□□ 0.28
VMP1-201ENST00000262291 DCAF5Q96JK2 942 aa16.79■□□□□ 0.28
VMP1-201ENST00000262291 HEG1Q9ULI3 1381 aa16.79■□□□□ 0.28
VMP1-201ENST00000262291 SRGAP3O43295 1099 aa16.78■□□□□ 0.28
VMP1-201ENST00000262291 SDSP20132 328 aa16.78■□□□□ 0.28
VMP1-201ENST00000262291 ZCRB1Q8TBF4 217 aaKnown RBP16.78■□□□□ 0.28
VMP1-201ENST00000262291 SURF6O75683 361 aaKnown RBP16.77■□□□□ 0.28
VMP1-201ENST00000262291 XAGE3Q8WTP9 111 aa16.77■□□□□ 0.28
VMP1-201ENST00000262291 C9orf78Q9NZ63 289 aaPredicted RBP16.77■□□□□ 0.28
VMP1-201ENST00000262291 SIPA1L3O60292 1781 aaPredicted RBP16.77■□□□□ 0.28
VMP1-201ENST00000262291 CDC45O75419 566 aa16.77■□□□□ 0.28
VMP1-201ENST00000262291 BECN1Q14457 450 aa16.77■□□□□ 0.28
VMP1-201ENST00000262291 KSR2Q6VAB6 950 aa16.77■□□□□ 0.28
VMP1-201ENST00000262291 LRRCC1Q9C099 1032 aa16.77■□□□□ 0.28
VMP1-201ENST00000262291 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.77■□□□□ 0.286e-10■■□□□ 11.7
VMP1-201ENST00000262291 OVOS2A0A0G2JMS6 1433 aa16.77■□□□□ 0.27
VMP1-201ENST00000262291 COPS6Q7L5N1 327 aa16.76■□□□□ 0.27
VMP1-201ENST00000262291 NUTM1Q86Y26 1132 aa16.76■□□□□ 0.27
VMP1-201ENST00000262291 DDX21Q9NR30 783 aaKnown RBP eCLIP16.76■□□□□ 0.27
VMP1-201ENST00000262291 SCN11AQ9UI33 1791 aa16.76■□□□□ 0.27
VMP1-201ENST00000262291 COL5A2P05997 1499 aaPredicted RBP16.76■□□□□ 0.27
VMP1-201ENST00000262291 PTCD1O75127 700 aaKnown RBP16.76■□□□□ 0.27
VMP1-201ENST00000262291 RIC3Q7Z5B4 369 aa16.76■□□□□ 0.27
VMP1-201ENST00000262291 PDE1AP54750 535 aa16.76■□□□□ 0.27
VMP1-201ENST00000262291 RBM42Q9BTD8 480 aaKnown RBP16.76■□□□□ 0.27
VMP1-201ENST00000262291 HYPKQ9NX55 129 aa16.76■□□□□ 0.27
VMP1-201ENST00000262291 VSIG10Q8N0Z9 540 aa16.75■□□□□ 0.27
VMP1-201ENST00000262291 BTG4Q9NY30 223 aa16.75■□□□□ 0.27
VMP1-201ENST00000262291 C5P01031 1676 aa16.75■□□□□ 0.27
VMP1-201ENST00000262291 PXDNLA1KZ92 1463 aa16.74■□□□□ 0.27
VMP1-201ENST00000262291 MAP4K4O95819 1239 aaPredicted RBP16.74■□□□□ 0.27
VMP1-201ENST00000262291 IL2RBP14784 551 aa16.74■□□□□ 0.27
VMP1-201ENST00000262291 PA2G4Q9UQ80 394 aaKnown RBP16.74■□□□□ 0.27
VMP1-201ENST00000262291 IBTKQ9P2D0 1353 aaPredicted RBP16.73■□□□□ 0.27
VMP1-201ENST00000262291 FRAT2O75474 233 aaPredicted RBP16.73■□□□□ 0.27
VMP1-201ENST00000262291 SNRPA1P09661 255 aaKnown RBP16.73■□□□□ 0.27
VMP1-201ENST00000262291 SSH3Q8TE77 659 aa16.73■□□□□ 0.27
VMP1-201ENST00000262291 FMNL2Q96PY5 1086 aa16.73■□□□□ 0.27
VMP1-201ENST00000262291 MYD88Q99836 296 aa16.73■□□□□ 0.27
VMP1-201ENST00000262291 RILPL2Q969X0 211 aa16.72■□□□□ 0.27
VMP1-201ENST00000262291 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
VMP1-201ENST00000262291 IGKV5-2P06315 115 aa16.72■□□□□ 0.27
VMP1-201ENST00000262291 MX1P20591 662 aa16.72■□□□□ 0.27
VMP1-201ENST00000262291 OS9Q13438 667 aaPredicted RBP16.72■□□□□ 0.27
VMP1-201ENST00000262291 FAM43AQ8N2R8 423 aa16.72■□□□□ 0.27
VMP1-201ENST00000262291 SUCLG2Q96I99 432 aa16.72■□□□□ 0.27
VMP1-201ENST00000262291 CARD10Q9BWT7 1032 aa16.72■□□□□ 0.27
VMP1-201ENST00000262291 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
VMP1-201ENST00000262291 ZMYND15Q9H091 742 aa16.72■□□□□ 0.27
VMP1-201ENST00000262291 TRIM6-TRIM34B2RNG4 842 aa16.71■□□□□ 0.27
VMP1-201ENST00000262291 ATP5J2-PTCD1G3V325 749 aa16.71■□□□□ 0.27
VMP1-201ENST00000262291 HSP90AB1P08238 724 aaKnown RBP16.71■□□□□ 0.27
VMP1-201ENST00000262291 PCDH11XQ9BZA7 1347 aa16.71■□□□□ 0.27
VMP1-201ENST00000262291 PCDH11YQ9BZA8 1340 aa16.71■□□□□ 0.27
VMP1-201ENST00000262291 DDX58O95786 925 aaKnown RBP16.71■□□□□ 0.27
VMP1-201ENST00000262291 POLA2Q14181 598 aa16.71■□□□□ 0.27
VMP1-201ENST00000262291 UNC5CLQ8IV45 518 aa16.7■□□□□ 0.26
VMP1-201ENST00000262291 KIF2CQ99661 725 aa16.7■□□□□ 0.26
VMP1-201ENST00000262291 KAT6BQ8WYB5 2073 aa16.7■□□□□ 0.26
VMP1-201ENST00000262291 CD2BP2O95400 341 aaKnown RBP16.7■□□□□ 0.26
VMP1-201ENST00000262291 RBM25P49756 843 aaKnown RBP16.7■□□□□ 0.26
VMP1-201ENST00000262291 FOXD4L1Q9NU39 408 aa16.7■□□□□ 0.26
VMP1-201ENST00000262291 A1BGP04217 495 aa16.69■□□□□ 0.26
VMP1-201ENST00000262291 KLHDC4Q8TBB5 520 aa16.69■□□□□ 0.26
VMP1-201ENST00000262291 RHPN1Q8TCX5 695 aa16.69■□□□□ 0.26
VMP1-201ENST00000262291 ZNF330Q9Y3S2 320 aaPredicted RBP16.69■□□□□ 0.26
VMP1-201ENST00000262291 PKD1L3Q7Z443 1732 aa16.69■□□□□ 0.26
VMP1-201ENST00000262291 GRM8O00222 908 aa16.69■□□□□ 0.26
VMP1-201ENST00000262291 ADAMTS2O95450 1211 aa16.69■□□□□ 0.26
VMP1-201ENST00000262291 LINS1Q8NG48 757 aa16.69■□□□□ 0.26
VMP1-201ENST00000262291 KAZALD1Q96I82 304 aa16.69■□□□□ 0.26
VMP1-201ENST00000262291 BICC1Q9H694 974 aaKnown RBP16.69■□□□□ 0.26
VMP1-201ENST00000262291 ABCA3Q99758 1704 aa16.69■□□□□ 0.26
VMP1-201ENST00000262291 SIL1Q9H173 461 aa16.69■□□□□ 0.26
VMP1-201ENST00000262291 SALL3Q9BXA9 1300 aa16.68■□□□□ 0.26
VMP1-201ENST00000262291 ALDH1L1O75891 902 aa16.68■□□□□ 0.26
VMP1-201ENST00000262291 ANKRD13DQ6ZTN6 518 aa16.68■□□□□ 0.26
VMP1-201ENST00000262291 N4BP2Q86UW6 1770 aaPredicted RBP16.68■□□□□ 0.26
VMP1-201ENST00000262291 NBPF26B4DH59 902 aa16.68■□□□□ 0.26
VMP1-201ENST00000262291 NBPF14Q5TI25 921 aa16.68■□□□□ 0.26
VMP1-201ENST00000262291 NBPF10Q6P3W6 841 aaKnown RBP16.68■□□□□ 0.26
VMP1-201ENST00000262291 NBPF15Q8N660 670 aa16.68■□□□□ 0.26
VMP1-201ENST00000262291 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.68■□□□□ 0.26
VMP1-201ENST00000262291 EPHA10Q5JZY3 1008 aa16.67■□□□□ 0.26
VMP1-201ENST00000262291 LRP10Q7Z4F1 713 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms