RNA–Protein interactions for RNA: ENST00000262210.9

CSPP1-201, Transcript of centrosome and spindle pole associated protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPP1, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPP1-201ENST00000262210 SCN9AQ15858 1988 aa6.94□□□□□ -1.3
CSPP1-201ENST00000262210 IGKV5-2P06315 115 aa6.94□□□□□ -1.3
CSPP1-201ENST00000262210 NKX1-1Q15270 411 aaPredicted RBP6.94□□□□□ -1.3
CSPP1-201ENST00000262210 ESF1Q9H501 851 aaKnown RBP6.94□□□□□ -1.3
CSPP1-201ENST00000262210 QSER1Q2KHR3 1735 aa6.94□□□□□ -1.3
CSPP1-201ENST00000262210 SPATA31A1Q5TZJ5 1347 aa6.94□□□□□ -1.3
CSPP1-201ENST00000262210 LRRC37AA6NMS7 1700 aa6.94□□□□□ -1.3
CSPP1-201ENST00000262210 F6X3S4 739 aa6.94□□□□□ -1.3
CSPP1-201ENST00000262210 FER1L6Q2WGJ9 1857 aa6.94□□□□□ -1.3
CSPP1-201ENST00000262210 ZBTB40Q9NUA8 1239 aa6.94□□□□□ -1.3
CSPP1-201ENST00000262210 TAOK2Q9UL54 1235 aa6.94□□□□□ -1.3
CSPP1-201ENST00000262210 NGDNQ8NEJ9 315 aaKnown RBP6.93□□□□□ -1.3
CSPP1-201ENST00000262210 MAP3K5Q99683 1374 aa6.93□□□□□ -1.3
CSPP1-201ENST00000262210 SNED1Q8TER0 1413 aa6.93□□□□□ -1.3
CSPP1-201ENST00000262210 TPRNQ4KMQ1 711 aa6.93□□□□□ -1.3
CSPP1-201ENST00000262210 RCAN3Q9UKA8 241 aa6.93□□□□□ -1.3
CSPP1-201ENST00000262210 FNBP4Q8N3X1 1017 aaPredicted RBP6.93□□□□□ -1.3
CSPP1-201ENST00000262210 ASAP1Q9ULH1 1129 aa6.93□□□□□ -1.3
CSPP1-201ENST00000262210 NPHP3Q7Z494 1330 aa6.93□□□□□ -1.3
CSPP1-201ENST00000262210 WDR87Q6ZQQ6 2873 aa6.93□□□□□ -1.3
CSPP1-201ENST00000262210 PAK3O75914 559 aaPredicted RBP6.92□□□□□ -1.3
CSPP1-201ENST00000262210 C8orf34Q49A92 452 aa6.92□□□□□ -1.3
CSPP1-201ENST00000262210 TMEM57Q8N5G2 664 aa6.92□□□□□ -1.3
CSPP1-201ENST00000262210 CFAP44Q96MT7 982 aa6.92□□□□□ -1.3
CSPP1-201ENST00000262210 NOB1Q9ULX3 412 aaKnown RBP6.92□□□□□ -1.3
CSPP1-201ENST00000262210 U2SURPO15042 1029 aaKnown RBP6.92□□□□□ -1.3
CSPP1-201ENST00000262210 ONECUT3O60422 494 aaPredicted RBP6.92□□□□□ -1.3
CSPP1-201ENST00000262210 ITPK1Q13572 414 aa6.92□□□□□ -1.3
CSPP1-201ENST00000262210 C3orf67Q6ZVT6 689 aa6.92□□□□□ -1.3
CSPP1-201ENST00000262210 SIPA1L1O43166 1804 aa6.92□□□□□ -1.3
CSPP1-201ENST00000262210 DLEC1Q9Y238 1755 aa6.92□□□□□ -1.3
CSPP1-201ENST00000262210 C1orf115Q9H7X2 142 aa6.92□□□□□ -1.3
CSPP1-201ENST00000262210 DDX60LQ5H9U9 1706 aaKnown RBP6.92□□□□□ -1.3
CSPP1-201ENST00000262210 PIGBQ92521 554 aa6.92□□□□□ -1.3
CSPP1-201ENST00000262210 HDGFL2Q7Z4V5 671 aaPredicted RBP6.91□□□□□ -1.3
CSPP1-201ENST00000262210 WDR63Q8IWG1 891 aa6.91□□□□□ -1.3
CSPP1-201ENST00000262210 NFATC2IPQ8NCF5 419 aa6.91□□□□□ -1.3
CSPP1-201ENST00000262210 ZNF496Q96IT1 587 aaPredicted RBP6.91□□□□□ -1.3
CSPP1-201ENST00000262210 KIF2CQ99661 725 aa6.91□□□□□ -1.3
CSPP1-201ENST00000262210 BTG4Q9NY30 223 aa6.91□□□□□ -1.3
CSPP1-201ENST00000262210 SPATA31A5Q5VU36 1347 aa6.91□□□□□ -1.3
CSPP1-201ENST00000262210 SPATA31A7Q8IWB4 1347 aa6.91□□□□□ -1.3
CSPP1-201ENST00000262210 TRANK1O15050 2925 aa6.91□□□□□ -1.3
CSPP1-201ENST00000262210 FREM2Q5SZK8 3169 aa6.91□□□□□ -1.3
CSPP1-201ENST00000262210 PNMA6EA0A0J9YXQ4 647 aa6.91□□□□□ -1.3
CSPP1-201ENST00000262210 GIGYF1O75420 1035 aaPredicted RBP6.91□□□□□ -1.3
CSPP1-201ENST00000262210 PSME1Q06323 249 aa6.91□□□□□ -1.3
CSPP1-201ENST00000262210 C16orf71Q8IYS4 520 aaPredicted RBP6.91□□□□□ -1.3
CSPP1-201ENST00000262210 RBAK-RBAKDNI3L0D1 243 aa6.9□□□□□ -1.3
CSPP1-201ENST00000262210 RNMTO43148 476 aaKnown RBP6.9□□□□□ -1.3
CSPP1-201ENST00000262210 GOLGA2Q08379 1002 aa6.9□□□□□ -1.3
CSPP1-201ENST00000262210 CADPS2Q86UW7 1296 aa6.9□□□□□ -1.3
CSPP1-201ENST00000262210 LAMA5O15230 3695 aa6.9□□□□□ -1.3
CSPP1-201ENST00000262210 CDCA8Q53HL2 280 aa6.9□□□□□ -1.3
CSPP1-201ENST00000262210 BCL2L12Q9HB09 334 aa6.9□□□□□ -1.3
CSPP1-201ENST00000262210 ATG3Q9NT62 314 aa6.9□□□□□ -1.3
CSPP1-201ENST00000262210 NBPF7P0C2Y1 421 aaPredicted RBP6.9□□□□□ -1.31
CSPP1-201ENST00000262210 COG6Q9Y2V7 657 aa6.9□□□□□ -1.31
CSPP1-201ENST00000262210 COL1A1P02452 1464 aaPredicted RBP6.89□□□□□ -1.31
CSPP1-201ENST00000262210 CLUAP1Q96AJ1 413 aa6.89□□□□□ -1.31
CSPP1-201ENST00000262210 UBN2Q6ZU65 1347 aa6.89□□□□□ -1.31
CSPP1-201ENST00000262210 MEIS3Q99687 375 aa6.89□□□□□ -1.31
CSPP1-201ENST00000262210 CELSR3Q9NYQ7 3312 aa6.89□□□□□ -1.31
CSPP1-201ENST00000262210 FOXP2O15409 715 aa6.89□□□□□ -1.31
CSPP1-201ENST00000262210 INTS5Q6P9B9 1019 aaKnown RBP6.89□□□□□ -1.31
CSPP1-201ENST00000262210 POTEAQ6S8J7 498 aa6.89□□□□□ -1.31
CSPP1-201ENST00000262210 USP44Q9H0E7 712 aa6.89□□□□□ -1.31
CSPP1-201ENST00000262210 MYH7P12883 1935 aa6.89□□□□□ -1.31
CSPP1-201ENST00000262210 SLFNL1Q499Z3 407 aa6.88□□□□□ -1.31
CSPP1-201ENST00000262210 ARXQ96QS3 562 aa6.88□□□□□ -1.31
CSPP1-201ENST00000262210 IL16Q14005 1332 aa6.88□□□□□ -1.31
CSPP1-201ENST00000262210 NECTIN2Q92692 538 aa6.88□□□□□ -1.31
CSPP1-201ENST00000262210 GSPT1P15170 499 aaKnown RBP6.88□□□□□ -1.31
CSPP1-201ENST00000262210 CERKQ8TCT0 537 aa6.88□□□□□ -1.31
CSPP1-201ENST00000262210 FOCADQ5VW36 1801 aa6.88□□□□□ -1.31
CSPP1-201ENST00000262210 UNC5CLQ8IV45 518 aa6.87□□□□□ -1.31
CSPP1-201ENST00000262210 JARID2Q92833 1246 aaPredicted RBP6.87□□□□□ -1.31
CSPP1-201ENST00000262210 IRS2Q9Y4H2 1338 aa6.87□□□□□ -1.31
CSPP1-201ENST00000262210 TAF6LQ9Y6J9 622 aa6.87□□□□□ -1.31
CSPP1-201ENST00000262210 CD2BP2O95400 341 aaKnown RBP6.87□□□□□ -1.31
CSPP1-201ENST00000262210 KLHL34Q8N239 644 aa6.87□□□□□ -1.31
CSPP1-201ENST00000262210 IFT57Q9NWB7 429 aa6.87□□□□□ -1.31
CSPP1-201ENST00000262210 CHPF2Q9P2E5 772 aa6.87□□□□□ -1.31
CSPP1-201ENST00000262210 KAT6BQ8WYB5 2073 aa6.87□□□□□ -1.31
CSPP1-201ENST00000262210 HLFQ16534 295 aa6.87□□□□□ -1.31
CSPP1-201ENST00000262210 CARMIL3Q8ND23 1372 aa6.86□□□□□ -1.31
CSPP1-201ENST00000262210 PALLDQ8WX93 1383 aa6.86□□□□□ -1.31
CSPP1-201ENST00000262210 RFX5P48382 616 aaPredicted RBP6.86□□□□□ -1.31
CSPP1-201ENST00000262210 PIP4K2BP78356 416 aa6.86□□□□□ -1.31
CSPP1-201ENST00000262210 TTLL7Q6ZT98 887 aa6.86□□□□□ -1.31
CSPP1-201ENST00000262210 SLC52A2Q9HAB3 445 aa6.86□□□□□ -1.31
CSPP1-201ENST00000262210 CFAP47Q6ZTR5 3102 aa6.86□□□□□ -1.31
CSPP1-201ENST00000262210 MYH13Q9UKX3 1938 aa6.86□□□□□ -1.31
CSPP1-201ENST00000262210 A0A0G2JLW4 131 aa6.86□□□□□ -1.31
CSPP1-201ENST00000262210 BEND3Q5T5X7 828 aa6.86□□□□□ -1.31
CSPP1-201ENST00000262210 TSHZ3Q63HK5 1081 aa6.85□□□□□ -1.31
CSPP1-201ENST00000262210 CARD10Q9BWT7 1032 aa6.85□□□□□ -1.31
CSPP1-201ENST00000262210 SMIM22K7EJ46 135 aa6.85□□□□□ -1.31
CSPP1-201ENST00000262210 KLHDC4Q8TBB5 520 aa6.85□□□□□ -1.31
CSPP1-201ENST00000262210 E9PSI1 815 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms